mRNA_C-australica_Contig_10319.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10319.1.1
Unique NamemRNA_C-australica_Contig_10319.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
[Close]
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A2E5AHL0_9PROT (Replication-associated recombination protein A n=3 Tax=Oceanicaulis TaxID=153232 RepID=A0A2E5AHL0_9PROT)

HSP 1 Score: 389 bits (998), Expect = 2.200e-132
Identity = 193/227 (85.02%), Postives = 206/227 (90.75%), Query Frame = 1 
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIR 681
            DGRY+LNLAEE+ AL PE PL++ DL+ VLQ+RAP YDKDREEHYNLISALHKSVRGSDPDAALYWLARML+AGEDP+YLARRIVRMANE+IGLAD GAVHAALAAKDVYEFLGSPEGDLALAQAVVH+ACAPKSNAVY AWK ALRTAK TGSLMPP HILNAPTKLMK  GYGKGYEYDHD EGGVSGQNYFP EM + P FYEP  +GREAAL ERLERFRA+R
Sbjct:  204 DGRYMLNLAEELIALKPETPLDLKDLSSVLQKRAPVYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLSAGEDPLYLARRIVRMANEEIGLADPGAVHAALAAKDVYEFLGSPEGDLALAQAVVHIACAPKSNAVYTAWKAALRTAKGTGSLMPPAHILNAPTKLMKEVGYGKGYEYDHDVEGGVSGQNYFPTEMGKPPTFYEPKPQGREAALLERLERFRAVR 430
[Close]
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: UPI001F1EC238 (replication-associated recombination protein A n=1 Tax=Hyphobacterium sp. SN044 TaxID=2912575 RepID=UPI001F1EC238)

HSP 1 Score: 388 bits (997), Expect = 3.010e-132
Identity = 189/227 (83.26%), Postives = 212/227 (93.39%), Query Frame = 1 
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIR 681
            DGRYLLNLAEEVF   P+ PL+ +++A +LQ+RAPAYDKDREEHYNLISALHK+VRGSDPDAALYWLARML AGEDP++LARRIVRMA EDIGLAD  A+HAALAAKDVY+FLGSPEG+LALAQAVVHLACAPKSNAVY AWKGA++TA++TGSLMPPKHILNAPTKLMKSEGYG GYEYDHDAEGGVSGQ+YFPDEM+ERPVFY PT+RGREA + ERLER+R+IR
Sbjct:  204 DGRYLLNLAEEVFESEPDHPLDPAEIAELLQKRAPAYDKDREEHYNLISALHKAVRGSDPDAALYWLARMLGAGEDPLFLARRIVRMAIEDIGLADPTAIHAALAAKDVYDFLGSPEGELALAQAVVHLACAPKSNAVYTAWKGAMKTARETGSLMPPKHILNAPTKLMKSEGYGSGYEYDHDAEGGVSGQDYFPDEMKERPVFYRPTDRGREAVIAERLERWRSIR 430
[Close]
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A2U2BRQ3_9PROT (Replication-associated recombination protein A n=1 Tax=Marinicauda salina TaxID=2135793 RepID=A0A2U2BRQ3_9PROT)

HSP 1 Score: 377 bits (967), Expect = 1.000e-127
Identity = 188/230 (81.74%), Postives = 207/230 (90.00%), Query Frame = 1 
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIRRGR 690
            DGRYLLNLAEEV AL  E+PLE++DL  VLQRRAP YDKDREEHYNLISALHKSVRGSDPDAALYWLARML  GEDP++LARRIVRMANEDIGLAD  AVHAALAAK+VY+FLGSPEG+LALAQAVVHLACAPKSNAVYKA+  A+R AK TGSLMPPKHILNAPTKLMKSEGYG GYEYDH  EGGVSGQ+YFP+ M +RPVFY PT+ GREAA++ERLER+R +R+ R
Sbjct:  204 DGRYLLNLAEEVLALDAEQPLELADLGEVLQRRAPVYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLAGGEDPLFLARRIVRMANEDIGLADPTAVHAALAAKEVYDFLGSPEGELALAQAVVHLACAPKSNAVYKAYGAAMRAAKQTGSLMPPKHILNAPTKLMKSEGYGSGYEYDHAVEGGVSGQDYFPEAMTDRPVFYSPTDHGREAAIRERLERWRGLRKDR 433
[Close]
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: UPI001EDDCC42 (replication-associated recombination protein A n=1 Tax=Shewanella sp. ER-Te-42B-Light TaxID=2872342 RepID=UPI001EDDCC42)

HSP 1 Score: 376 bits (966), Expect = 1.470e-127
Identity = 185/230 (80.43%), Postives = 210/230 (91.30%), Query Frame = 1 
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIRRGR 690
            DGRYLLNLAE+VFA AP+ PL+ + L  ++QRRAP+YDK  + HYNLISALHKS+RGSDPDAALYWLARML AGEDP++LARR+VRMANEDIGLAD GAVHAALAAKDVY+FLGSPEG+LALAQAVVHLACAPKSNAVYKAWK A+R+AK TGSL PPKHILNAPTKLMK+EGYG+GYEYDHDA GGVSGQ+YFPDEM +RPVFYEP + GREA LKERL+R+RA+R+ R
Sbjct:  204 DGRYLLNLAEQVFAAAPDAPLDPAGLGQLVQRRAPSYDKAGDSHYNLISALHKSIRGSDPDAALYWLARMLEAGEDPLFLARRLVRMANEDIGLADPGAVHAALAAKDVYDFLGSPEGELALAQAVVHLACAPKSNAVYKAWKAAVRSAKATGSLSPPKHILNAPTKLMKAEGYGQGYEYDHDAAGGVSGQDYFPDEMTDRPVFYEPKDGGREAQLKERLDRWRALRKER 433
[Close]
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A3C2E430_9PROT (Replication-associated recombination protein A n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A3C2E430_9PROT)

HSP 1 Score: 375 bits (963), Expect = 4.330e-127
Identity = 184/227 (81.06%), Postives = 204/227 (89.87%), Query Frame = 1 
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIR 681
            DGRYLLNLAEEVF   P   LE  ++A +LQ+RAPAYDKDR+EHYNLISALHKS+RGSDPDAALYWLARML AGEDP+YLARR+VRMANEDIGLAD  A+HAALAAKDVY+FLGSPEG+LALAQAVVHLA APKSNAVY AWKGA+R A++TGSLMPPKHILNAPTKLMKSEGYG GYEYDHDA GG+SGQ+YFPDEMR+RPV Y PT+RGREAA+ ERL  +R IR
Sbjct:  204 DGRYLLNLAEEVFESPPGHNLEPGEIAELLQKRAPAYDKDRDEHYNLISALHKSIRGSDPDAALYWLARMLGAGEDPLYLARRLVRMANEDIGLADPTAIHAALAAKDVYDFLGSPEGELALAQAVVHLAAAPKSNAVYTAWKGAMRLARETGSLMPPKHILNAPTKLMKSEGYGSGYEYDHDAAGGISGQDYFPDEMRDRPVLYSPTDRGREAAIAERLAHWRGIR 430
[Close]
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A5M6ZI18_9PROT (Replication-associated recombination protein A n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZI18_9PROT)

HSP 1 Score: 374 bits (961), Expect = 8.430e-127
Identity = 188/230 (81.74%), Postives = 204/230 (88.70%), Query Frame = 1 
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIRRGR 690
            DGRYLLNLAE+VF   PE  L+ + L  ++QRRAP YDKDRE HYNLISALHKSVRGSDPDAALYWLARML AGEDP+YLARR+VRMANEDIGLAD GAVHAALAAKDVY+FLGSPEG+LALAQAVVHLACAPKSNAVY AWK A RTAK TGSL PPKHILNAPTKLMK+EGYG GYEYDHDA  GVSGQ+YFPDEM ERPVFY+P +RGREA LKERL R+RA+R+ R
Sbjct:  204 DGRYLLNLAEQVFTAEPEAALDPAGLGALVQRRAPVYDKDREGHYNLISALHKSVRGSDPDAALYWLARMLEAGEDPLYLARRLVRMANEDIGLADPGAVHAALAAKDVYDFLGSPEGELALAQAVVHLACAPKSNAVYAAWKAAQRTAKATGSLNPPKHILNAPTKLMKAEGYGAGYEYDHDAPDGVSGQDYFPDEMGERPVFYQPGDRGREAQLKERLARWRALRKER 433
[Close]
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A4S2H3A3_9PROT (Replication-associated recombination protein A n=1 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4S2H3A3_9PROT)

HSP 1 Score: 373 bits (958), Expect = 1.980e-126
Identity = 189/227 (83.26%), Postives = 203/227 (89.43%), Query Frame = 1 
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIR 681
            DGRYLLNLAEEV AL P+ PL ++DL+GVLQRRAP YDKDREEHYNLISALHKSVRGSDPDAALYWLARML  GEDP+YLARRIVRMANEDIGLAD  AVHAALAAKDVY+FLGSPEG+LALAQAVVHLA APKSNAVY AWK A R AK+TGSLMPPKHILNAPT+LMK EGYGKGY YDHD EGGVSGQNYFP+EM ERP FY P + GREAA+KERLER+  +R
Sbjct:  204 DGRYLLNLAEEVLALQPDAPLGLADLSGVLQRRAPVYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLAGGEDPLYLARRIVRMANEDIGLADPTAVHAALAAKDVYDFLGSPEGELALAQAVVHLASAPKSNAVYTAWKAAQRAAKETGSLMPPKHILNAPTRLMKEEGYGKGYRYDHDVEGGVSGQNYFPEEM-ERPRFYAPKDVGREAAIKERLERWGKLR 429
[Close]
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A550K784_9PROT (Replication-associated recombination protein A n=1 Tax=Glycocaulis profundi TaxID=2518983 RepID=A0A550K784_9PROT)

HSP 1 Score: 372 bits (955), Expect = 6.850e-126
Identity = 186/227 (81.94%), Postives = 204/227 (89.87%), Query Frame = 1 
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIR 681
            DGRY+LNLAEE  AL P  PL  +DLA +LQ+RAP YDKDREEHYNLISALHKSVRGSDPDAALYWLARML  GEDP+YLARRIVRMANEDIGLAD  AVHAALAAKDVY+FLGSPEG+LALAQAVVHLA APKSNAVY AWK A+R+A++TGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQ+YFP+EM++RP FY+P   GREAA+KERLE +  IR
Sbjct:  204 DGRYILNLAEEALALDPPAPLTPADLARMLQKRAPVYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLAGGEDPLYLARRIVRMANEDIGLADPTAVHAALAAKDVYDFLGSPEGELALAQAVVHLAAAPKSNAVYVAWKAAMRSARETGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQDYFPEEMKDRPRFYDPKPVGREAAIKERLEAWGKIR 430
[Close]
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A4S2H806_9PROT (Replication-associated recombination protein A n=1 Tax=Marinicauda pacifica TaxID=1133559 RepID=A0A4S2H806_9PROT)

HSP 1 Score: 366 bits (939), Expect = 1.500e-123
Identity = 186/228 (81.58%), Postives = 206/228 (90.35%), Query Frame = 1 
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIRR 684
            DGRYLLNLAEE+F+L  E+PL ++DLA VLQRRAP YDKDREEHYNLISALHKSVRGSDPDAALYWLARML  GEDP++LARRIVRMANEDIGLAD  AVHAALAAK+VY+FLGSPEG+LALAQAVVHLACAPKSNAVY A+K A+R+AK TGSLMPPKHILNAPTKLMKSEGYG+GY YDH+  GGVSGQNYFP+ M ER  FYEPT+RGREAA+KERLE +  +RR
Sbjct:  204 DGRYLLNLAEELFSLKLEKPLGLADLADVLQRRAPVYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLAGGEDPLFLARRIVRMANEDIGLADPTAVHAALAAKEVYDFLGSPEGELALAQAVVHLACAPKSNAVYTAYKAAMRSAKSTGSLMPPKHILNAPTKLMKSEGYGEGYRYDHNEAGGVSGQNYFPEGM-ERERFYEPTDRGREAAIKERLEHWDKLRR 430
[Close]
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Match: A0A3D5ZV54_9PROT (Replication-associated recombination protein A n=5 Tax=Maricaulaceae TaxID=2800061 RepID=A0A3D5ZV54_9PROT)

HSP 1 Score: 359 bits (921), Expect = 9.460e-121
Identity = 178/227 (78.41%), Postives = 196/227 (86.34%), Query Frame = 1 
Query:    1 DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAVHAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAKDTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRERPVFYEPTERGREAALKERLERFRAIR 681
            DGRYLLNLAEEV  L  E PL  ++L   LQRRAP YDKDREEHYNLISALHKSVRGSDPDAALYWLARML AGEDP++LARRIVRMANEDIGLAD  A+HAALAAK+ Y+FLGSPEG+LALAQAVVHLACAPKSNAVY AWK A R A  TGSLMPP HILNAPT+LMK +GYGKGYEYDHDA GG+SGQ+Y PD M++RP  YEP + GREAA+ ERLER+RA+R
Sbjct:  204 DGRYLLNLAEEVLRLEAETPLSTAELGRFLQRRAPVYDKDREEHYNLISALHKSVRGSDPDAALYWLARMLGAGEDPLFLARRIVRMANEDIGLADPTAIHAALAAKETYDFLGSPEGELALAQAVVHLACAPKSNAVYTAWKAAQRLAGQTGSLMPPAHILNAPTRLMKEQGYGKGYEYDHDAPGGMSGQDYLPDAMKDRPRLYEPKDSGREAAIAERLERWRALR 430
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10319.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E5AHL0_9PROT2.200e-13285.02Replication-associated recombination protein A n=3... [more]
UPI001F1EC2383.010e-13283.26replication-associated recombination protein A n=1... [more]
A0A2U2BRQ3_9PROT1.000e-12781.74Replication-associated recombination protein A n=1... [more]
UPI001EDDCC421.470e-12780.43replication-associated recombination protein A n=1... [more]
A0A3C2E430_9PROT4.330e-12781.06Replication-associated recombination protein A n=2... [more]
A0A5M6ZI18_9PROT8.430e-12781.74Replication-associated recombination protein A n=1... [more]
A0A4S2H3A3_9PROT1.980e-12683.26Replication-associated recombination protein A n=1... [more]
A0A550K784_9PROT6.850e-12681.94Replication-associated recombination protein A n=1... [more]
A0A4S2H806_9PROT1.500e-12381.58Replication-associated recombination protein A n=1... [more]
A0A3D5ZV54_9PROT9.460e-12178.41Replication-associated recombination protein A n=5... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10319contigC-australica_Contig_10319:2..697 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog314254.OA2633_03451
Preferred namerarA
PFAMsAAA,AAA_assoc_2,MgsA_C,RuvB_N
Model size696
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K07478
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005657,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0030894,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576
Exons1
Evalue3.6e-133
EggNOG OGsCOG2256@1|root,COG2256@2|Bacteria,1MUVS@1224|Proteobacteria,2TQVF@28211|Alphaproteobacteria,43WBW@69657|Hyphomonadaceae
DescriptionCOG2256 ATPase related to the helicase subunit of the Holliday junction resolvase
Cds size696
COG categoryL
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586769.6403203-CDS-C-australica_Contig_10319:1..6971682586769.6403203-CDS-C-australica_Contig_10319:1..697Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10319 2..697 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10319.1.1prot_C-australica_Contig_10319.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10319 2..697 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10319.1.1

>prot_C-australica_Contig_10319.1.1 ID=prot_C-australica_Contig_10319.1.1|Name=mRNA_C-australica_Contig_10319.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=232bp
DGRYLLNLAEEVFALAPEEPLEVSDLAGVLQRRAPAYDKDREEHYNLISA
LHKSVRGSDPDAALYWLARMLNAGEDPMYLARRIVRMANEDIGLADAGAV
HAALAAKDVYEFLGSPEGDLALAQAVVHLACAPKSNAVYKAWKGALRTAK
DTGSLMPPKHILNAPTKLMKSEGYGKGYEYDHDAEGGVSGQNYFPDEMRE
RPVFYEPTERGREAALKERLERFRAIRRGRC*
back to top

mRNA from alignment at C-australica_Contig_10319:2..697+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10319.1.1 ID=mRNA_C-australica_Contig_10319.1.1|Name=mRNA_C-australica_Contig_10319.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=696bp|location=Sequence derived from alignment at C-australica_Contig_10319:2..697+ (Chrysoparadoxa australica CS_1217)
GATGGGCGCTACCTGCTGAACCTTGCTGAAGAGGTCTTTGCGCTCGCCCC
TGAAGAGCCGCTGGAGGTTTCTGACCTTGCCGGCGTGCTCCAGCGCCGCG
CCCCCGCCTACGACAAGGACCGCGAGGAGCACTACAATCTCATCTCTGCC
CTGCATAAGTCGGTGCGTGGCTCTGATCCCGACGCGGCGCTCTACTGGCT
GGCGCGCATGCTGAACGCCGGTGAGGACCCGATGTATCTGGCGCGTCGTA
TCGTACGCATGGCCAATGAGGATATCGGTCTGGCCGATGCGGGCGCGGTC
CATGCGGCGCTGGCGGCCAAGGATGTCTACGAATTTCTGGGCAGTCCGGA
AGGCGATCTGGCCCTCGCACAAGCCGTGGTCCATCTTGCCTGTGCGCCCA
AATCCAATGCCGTTTACAAGGCCTGGAAAGGGGCACTGCGCACCGCCAAG
GACACAGGCTCCCTGATGCCGCCCAAGCACATCCTCAACGCCCCGACAAA
GCTGATGAAGTCAGAAGGCTATGGGAAGGGCTATGAATACGACCACGACG
CAGAAGGCGGCGTTTCAGGTCAGAATTACTTCCCCGACGAGATGCGCGAG
CGCCCGGTTTTCTATGAACCGACCGAGCGAGGCCGCGAAGCCGCTTTGAA
AGAGCGACTGGAGCGGTTCAGGGCGATAAGGCGGGGGCGGTGCTAG
back to top

Coding sequence (CDS) from alignment at C-australica_Contig_10319:2..697+

>mRNA_C-australica_Contig_10319.1.1 ID=mRNA_C-australica_Contig_10319.1.1|Name=mRNA_C-australica_Contig_10319.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=696bp|location=Sequence derived from alignment at C-australica_Contig_10319:2..697+ (Chrysoparadoxa australica CS_1217)
GATGGGCGCTACCTGCTGAACCTTGCTGAAGAGGTCTTTGCGCTCGCCCC
TGAAGAGCCGCTGGAGGTTTCTGACCTTGCCGGCGTGCTCCAGCGCCGCG
CCCCCGCCTACGACAAGGACCGCGAGGAGCACTACAATCTCATCTCTGCC
CTGCATAAGTCGGTGCGTGGCTCTGATCCCGACGCGGCGCTCTACTGGCT
GGCGCGCATGCTGAACGCCGGTGAGGACCCGATGTATCTGGCGCGTCGTA
TCGTACGCATGGCCAATGAGGATATCGGTCTGGCCGATGCGGGCGCGGTC
CATGCGGCGCTGGCGGCCAAGGATGTCTACGAATTTCTGGGCAGTCCGGA
AGGCGATCTGGCCCTCGCACAAGCCGTGGTCCATCTTGCCTGTGCGCCCA
AATCCAATGCCGTTTACAAGGCCTGGAAAGGGGCACTGCGCACCGCCAAG
GACACAGGCTCCCTGATGCCGCCCAAGCACATCCTCAACGCCCCGACAAA
GCTGATGAAGTCAGAAGGCTATGGGAAGGGCTATGAATACGACCACGACG
CAGAAGGCGGCGTTTCAGGTCAGAATTACTTCCCCGACGAGATGCGCGAG
CGCCCGGTTTTCTATGAACCGACCGAGCGAGGCCGCGAAGCCGCTTTGAA
AGAGCGACTGGAGCGGTTCAGGGCGATAAGGCGGGGGCGGTGCTAG
back to top