mRNA_C-australica_Contig_1030.1.9 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1030.1.9
Unique NamemRNA_C-australica_Contig_1030.1.9
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
[Close]
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: A0A3Q3E9C3_9LABR (RING finger protein 145-like n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3E9C3_9LABR)

HSP 1 Score: 68.6 bits (166), Expect = 3.910e-8
Identity = 57/191 (29.84%), Postives = 88/191 (46.07%), Query Frame = 2 
Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
            ML SL    TM  Y +   + F    I  +D +++ V  V   ++ ++ L V+      S  G W  +  S + +H         W  A   W++F L  +  +   S  R TE  L + N+   VC +C +E+  SS + T C    H+FH  CL +W+Y    CPMC  + + P  P AP P+ G+A A
Sbjct:  417 MLTSLQVTGTMLIYSLFMVELFRSDPIESLDEVIYWVNAVSRVLEFMVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRQEAAKKINSLPRATERELQRHND---VCAICFQEM--SSAVITYCG---HFFHGNCLRKWLYVQETCPMCH-QTVRPN-PSAPSPASGDAPA 593
[Close]
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: A0A667YZK4_9TELE (Zmp:0000000662 n=3 Tax=Euacanthomorphacea TaxID=123369 RepID=A0A667YZK4_9TELE)

HSP 1 Score: 67.8 bits (164), Expect = 5.910e-8
Identity = 56/191 (29.32%), Postives = 85/191 (44.50%), Query Frame = 2 
Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
            ML SL    TM  Y +   + F    I  +D +++ V  V   ++ ++ L V+      S  G W  +  S + +H         W  A   W++F L  +  +   S  R T E L + N+   VC +C +E+  SS + T C    H+FH  CL +W+Y    CPMC   +     P  PGPS G  +A
Sbjct:  415 MLTSLQVTGTMLIYSLFMVELFRSDPIDSLDEVIYWVNAVSRVLEFVVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRQEAAKKINSLPRATAEQLQQHND---VCSICFQEM--SSAVITYCG---HFFHGNCLRKWLYVQETCPMCHQAV----RPSPPGPSQGSGDA 589
[Close]
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: UPI001BD34D1B (RING finger protein 145 n=1 Tax=Cheilinus undulatus TaxID=241271 RepID=UPI001BD34D1B)

HSP 1 Score: 67.8 bits (164), Expect = 6.660e-8
Identity = 57/191 (29.84%), Postives = 88/191 (46.07%), Query Frame = 2 
Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
            ML SL    TM  Y +   + F    I  +D +++ V  V   ++ ++ L V+      S  G W  +  S + +H         W  A   W++F L  +  +   S  R TE+ L + N+   VC +C +E+T  S + T C    H+FH  CL +W+Y    CPMC  + + P  P  P P+ GEA A
Sbjct:  415 MLTSLQVTGTMLIYSLFMVELFRSDPIESLDEVIYWVNAVSRVLEFVVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRQEAAKKINSLPRATEQQLQQHND---VCSICFQEMT--SAVITYCG---HFFHGNCLRKWLYVQETCPMCH-QTVRPN-PSGPSPASGEAPA 591
[Close]
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: UPI00117640D6 (LOW QUALITY PROTEIN: RING finger protein 145-like n=1 Tax=Myripristis murdjan TaxID=586833 RepID=UPI00117640D6)

HSP 1 Score: 67.8 bits (164), Expect = 7.010e-8
Identity = 56/191 (29.32%), Postives = 85/191 (44.50%), Query Frame = 2 
Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
            ML SL    TM  Y +   + F    I  +D +++ V  V   ++ ++ L V+      S  G W  +  S + +H         W  A   W++F L  +  +   S  R T E L + N+   VC +C +E+  SS + T C    H+FH  CL +W+Y    CPMC   +     P  PGPS G  +A
Sbjct:  415 MLTSLQVTGTMLIYSLFMVELFRSDPIDSLDEVIYWVNAVSRVLEFVVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRQEAAKKINSLPRATAEQLQQHND---VCSICFQEM--SSAVITYCG---HFFHGNCLRKWLYVQETCPMCHQAV----RPSPPGPSQGSGDA 589
[Close]
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: A0A3B1KGV3_ASTMX (RING finger protein 145-like n=2 Tax=Astyanax mexicanus TaxID=7994 RepID=A0A3B1KGV3_ASTMX)

HSP 1 Score: 67.0 bits (162), Expect = 1.080e-7
Identity = 52/179 (29.05%), Postives = 81/179 (45.25%), Query Frame = 2 
Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAP 1966
            ML SL    T+  Y +   + +  T + G+D +M+ V GV   ++  + L V+      S  G W  +  S + +H         W  A   W++F L  +  R   S  R   +   +L E G+VC +C +++T  S + T C    H+FH  CL +W+Y    CPMC   I    AP
Sbjct:  413 MLTSLQVTGTLLIYCLFMVEVWRSTALPGLDEVMYYVNGVCRVLEFAVALCVVAYGAWESLWGEWSWMGASVIIIHSYCNV----WLRAQAGWKSFLLRQEAARKINSLPRANAQ---QLQEHGDVCAICFQDMT--SAVITYCG---HFFHGNCLRKWLYVQETCPMCHTSIKPTSAP 579
[Close]
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: A0A8C5H9X1_9TELE (RING finger protein 145-like n=3 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5H9X1_9TELE)

HSP 1 Score: 66.6 bits (161), Expect = 1.510e-7
Identity = 54/191 (28.27%), Postives = 87/191 (45.55%), Query Frame = 2 
Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
            ML SL    TM  Y +   + F    I  +D +++ V  V   ++ ++ L V+      S  G W  +  S + +H         W  A   W++F L  +  +   S  R T + L +LN+   VC +C +E+  SS + T C    H+FHA CL +W+Y    CPMC   +   E  ++   + GE+ A
Sbjct:  415 MLTSLQVTGTMLIYSLFMVELFRSDPIESLDEVIYWVNAVSRVLEFVVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWKSFLLRREAAKKINSLPRATPQQLQQLND---VCSICFQEM--SSAVITYCG---HFFHANCLRKWLYVQETCPMCHQTVQHAEPTQSQAGATGESPA 593
[Close]
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: UPI00148F54A5 (RING finger protein 145 n=2 Tax=Eupercaria TaxID=1489922 RepID=UPI00148F54A5)

HSP 1 Score: 66.2 bits (160), Expect = 1.980e-7
Identity = 55/191 (28.80%), Postives = 87/191 (45.55%), Query Frame = 2 
Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
            ML SL    TM  Y +   + F    I  +D +++ V  V   ++ ++ L V+      S  G W  +  S + +H         W  A   W++F L  +  +   S  R TE+ L + N+   VC +C +E+  SS + T C    H+FH  CL +W+Y    CPMC   +     P +PGP+  +A A
Sbjct:  415 MLTSLQVTGTMLIYSLFMVELFRSDPIESLDEVIYWVNAVSRVLEFVVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRQEAAKKINSLPRATEQQLRQHND---VCSICFQEM--SSAVITYCG---HFFHGNCLRKWLYVQETCPMCHQTV----RPTSPGPASEDAPA 589
[Close]
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: A0A673CHB6_9TELE (RING finger protein 145-like n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673CHB6_9TELE)

HSP 1 Score: 65.9 bits (159), Expect = 2.230e-7
Identity = 56/189 (29.63%), Postives = 84/189 (44.44%), Query Frame = 2 
Query: 1445 MLDSL----TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILM-----PEAPEAPGP 1981
            ML SL    TM  Y +   + F    I  +D +++ V  V   ++ ++ L V+      S  G W  +  S + +H         W  A   W++F L  +  +   S  R T E L + N+   VC +C +E+  SS + T C    H+FH  CL +W+Y    CPMC   +       PEAP AP P
Sbjct:  420 MLTSLQVTGTMLIYSLFMVELFRSDPIESLDEVIYWVNAVSRVLEFVVALCVVAYGTWESLFGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRQEAAKKINSLPRATTEQLQQHND---VCSICFQEM--SSAVITYCG---HFFHGNCLRKWLYVQETCPMCHQTVRPTPAPGPEAPGAPSP 596
[Close]
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: UPI001C09FD4F (RING finger protein 145 isoform X1 n=3 Tax=Alosa TaxID=34772 RepID=UPI001C09FD4F)

HSP 1 Score: 65.5 bits (158), Expect = 2.960e-7
Identity = 47/184 (25.54%), Postives = 82/184 (44.57%), Query Frame = 2 
Query: 1460 TMRYYGIGRPQQFGPTGIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLG---FSGLGWGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
            T+  YG+   +    T I G+D +++ V GV   ++ LL + V++       F    W   ++  +H + S+      W  A   W  F L  +  R   S  R +++   +L +  +VC +C +++   S + T C    HYFH  CL +W+Y    CPMC + +    + +   P     EA
Sbjct:  415 TLLIYGLFMLEVCLSTAISGLDEVVYYVNGVCRALEFLLAVCVVLYGAWECVFGEWSWLGASVLIVHSYCSV------WLRARAGWNNFLLRREAARKISSLPRASQQ---QLRDHNDVCAICYQDML--SAVITYCG---HYFHGNCLRKWLYVQETCPMCHSPVKQTPSDQTAAPESPRQEA 584
[Close]
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Match: UPI0015B126A1 (RING finger protein 145 isoform X1 n=3 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015B126A1)

HSP 1 Score: 65.1 bits (157), Expect = 4.590e-7
Identity = 47/165 (28.48%), Postives = 74/165 (44.85%), Query Frame = 2 
Query: 1511 IFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLG-WGDVTLSPLHVHLSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEVCVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMPEAPEAPGPSVGEAEA 2002
            I  +D +++ V  V   ++ L+ L V+      S LG W  +  S + +H         W  A   W++F L  +      S  R T+E L + N+   VC +C +E+  SS + T C    H+FH  CL +W+Y    CPMC   +    +P+ P     E  A
Sbjct:  443 IDSLDEIIYCVNAVSRVLEFLVALCVVAYGTWESLLGEWSWMGASVIIIHSYFNV----WLRAQSGWRSFLLRREAAHKINSLPRATDEQLRRHND---VCAICFQEM--SSAVVTLCG---HFFHGNCLRKWLYVQETCPMCHQPVKPTASPQGPAAEAQEGAA 595
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1030.1.9 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3Q3E9C3_9LABR3.910e-829.84RING finger protein 145-like n=1 Tax=Labrus bergyl... [more]
A0A667YZK4_9TELE5.910e-829.32Zmp:0000000662 n=3 Tax=Euacanthomorphacea TaxID=12... [more]
UPI001BD34D1B6.660e-829.84RING finger protein 145 n=1 Tax=Cheilinus undulatu... [more]
UPI00117640D67.010e-829.32LOW QUALITY PROTEIN: RING finger protein 145-like ... [more]
A0A3B1KGV3_ASTMX1.080e-729.05RING finger protein 145-like n=2 Tax=Astyanax mexi... [more]
A0A8C5H9X1_9TELE1.510e-728.27RING finger protein 145-like n=3 Tax=Gouania willd... [more]
UPI00148F54A51.980e-728.80RING finger protein 145 n=2 Tax=Eupercaria TaxID=1... [more]
A0A673CHB6_9TELE2.230e-729.63RING finger protein 145-like n=1 Tax=Sphaeramia or... [more]
UPI001C09FD4F2.960e-725.54RING finger protein 145 isoform X1 n=3 Tax=Alosa T... [more]
UPI0015B126A14.590e-728.48RING finger protein 145 isoform X1 n=3 Tax=Anguill... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1030contigC-australica_Contig_1030:181..4054 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog7739.XP_002607926.1
Preferred nameRNF145
PFAMsTRC8_N,zf-C3HC4_2,zf-RING_2
Model size2338
Max annot lvl33208|Metazoa
KEGG koko:K15703
Hectar predicted targeting categorysignal anchor
GOsGO:0000209,GO:0002376,GO:0002520,GO:0003674,GO:0003824,GO:0004842,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019941,GO:0030097,GO:0030099,GO:0030154,GO:0030163,GO:0032446,GO:0032501,GO:0032502,GO:0036211,GO:0043161,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0048468,GO:0048513,GO:0048534,GO:0048731,GO:0048856,GO:0048869,GO:0051603,GO:0061515,GO:0061630,GO:0061659,GO:0070647,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575
Exons14
Evalue1.63e-10
EggNOG OGsCOG5243@1|root,KOG0802@2759|Eukaryota,38EUN@33154|Opisthokonta,3B9XQ@33208|Metazoa,3CSV0@33213|Bilateria,481Z5@7711|Chordata
Ec32 ortholog descriptionZinc finger, RING-type
Ec32 orthologEc-26_002860.1
EC2.3.2.27
Descriptionubiquitin-like protein ligase activity
Cds size2193
COG categoryO
BRITEko00000,ko01000,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1030.1.9prot_C-australica_Contig_1030.1.9Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1030 188..3916 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586767.6489954-UTR-C-australica_Contig_1030:180..1871682586767.6489954-UTR-C-australica_Contig_1030:180..187Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1030 181..187 +
1682586767.805562-UTR-C-australica_Contig_1030:3916..40541682586767.805562-UTR-C-australica_Contig_1030:3916..4054Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1030 3917..4054 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586767.6619694-CDS-C-australica_Contig_1030:187..3791682586767.6619694-CDS-C-australica_Contig_1030:187..379Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 188..379 +
1682586767.672396-CDS-C-australica_Contig_1030:450..6211682586767.672396-CDS-C-australica_Contig_1030:450..621Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 451..621 +
1682586767.6837325-CDS-C-australica_Contig_1030:686..7971682586767.6837325-CDS-C-australica_Contig_1030:686..797Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 687..797 +
1682586767.6934736-CDS-C-australica_Contig_1030:937..11021682586767.6934736-CDS-C-australica_Contig_1030:937..1102Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 938..1102 +
1682586767.704274-CDS-C-australica_Contig_1030:1179..12781682586767.704274-CDS-C-australica_Contig_1030:1179..1278Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 1180..1278 +
1682586767.7164314-CDS-C-australica_Contig_1030:1423..15931682586767.7164314-CDS-C-australica_Contig_1030:1423..1593Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 1424..1593 +
1682586767.7275183-CDS-C-australica_Contig_1030:1659..18491682586767.7275183-CDS-C-australica_Contig_1030:1659..1849Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 1660..1849 +
1682586767.7396903-CDS-C-australica_Contig_1030:1958..20001682586767.7396903-CDS-C-australica_Contig_1030:1958..2000Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 1959..2000 +
1682586767.7491393-CDS-C-australica_Contig_1030:2171..24791682586767.7491393-CDS-C-australica_Contig_1030:2171..2479Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 2172..2479 +
1682586767.7573974-CDS-C-australica_Contig_1030:2580..26711682586767.7573974-CDS-C-australica_Contig_1030:2580..2671Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 2581..2671 +
1682586767.7656035-CDS-C-australica_Contig_1030:2787..29191682586767.7656035-CDS-C-australica_Contig_1030:2787..2919Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 2788..2919 +
1682586767.7737432-CDS-C-australica_Contig_1030:3019..31151682586767.7737432-CDS-C-australica_Contig_1030:3019..3115Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 3020..3115 +
1682586767.7827482-CDS-C-australica_Contig_1030:3284..33961682586767.7827482-CDS-C-australica_Contig_1030:3284..3396Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 3285..3396 +
1682586767.7945135-CDS-C-australica_Contig_1030:3602..39161682586767.7945135-CDS-C-australica_Contig_1030:3602..3916Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1030 3603..3916 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1030.1.9

>prot_C-australica_Contig_1030.1.9 ID=prot_C-australica_Contig_1030.1.9|Name=mRNA_C-australica_Contig_1030.1.9|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=731bp
MFGYPGLNLSPKEEELSPEDTIWLNYVFLLESSLLFTFLCAGSLFIGLLI
QRGRSNPAEKLSALAFMLIAIKCILRAGLTLWFHWVGYLGFYLMVVFSAT
PSQLVMLQCGSAALLCTQYLEIDFHSNYWGFGMLAVMPLLQILDTRDIQG
VLFGPLAWAEGVCKNTVDYILKKPGRAGLNHVDFGALLADWCYRFGLLYI
ALQLLPAYGPNPDVILTLSQLIFPESQGILETKADANWVRGMAQEHLSFV
RSPLHQLCLTCFAVSACSSFVTVPIKLRVFPRTRGTTTDSAIDDALERAL
PYLLVLFMEVLLFRIFGLDGLATLGLSSSTDTPQVDEDMDSYFLMAAYDL
VLWPVILVATTHFSFQRGAEEALSECVNEEVALGNMGIKMIVRVSLAYAV
LMTMSAIPMAALIGSFGFSTLLVMNALTCHLPLPPPLHALPSSPLTLPFL
SSTPQILLFRHPIIILVNVSGQALKAMVYMLDSLTMRYYGIGRPQQFGPT
GIFGVDTLMHVVEGVLIFIKLLLGLAVIIITLGFSGLGWGDVTLSPLHVH
LSLRALQVWWQEAHQRWQAFRLFIQHVRSKPSWKRITEESLAKLNEEGEV
CVMCMEELTFSSGISTPCKPVPHYFHAECLNRWMYRSSKCPMCQAEILMP
EAPEAPGPSVGEAEAVAEAVAEAEAEAGEKTASGAGPESKSDVGEELKPG
YGIGPEREEGVLGEMALDSAGDQESRELRG*
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mRNA from alignment at C-australica_Contig_1030:181..4054+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1030.1.9 ID=mRNA_C-australica_Contig_1030.1.9|Name=mRNA_C-australica_Contig_1030.1.9|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3874bp|location=Sequence derived from alignment at C-australica_Contig_1030:181..4054+ (Chrysoparadoxa australica CS_1217)
GGCTCCAATGTTTGGGTACCCTGGCTTGAATCTGAGCCCAAAGGAGGAGG
AGCTAAGCCCCGAGGATACCATCTGGCTGAACTACGTTTTCCTTCTGGAA
TCCTCTTTGCTTTTCACCTTCCTTTGTGCTGGCTCACTCTTCATCGGCTT
ACTGATTCAACGTGGCCGATCAAATCCAGCTGAGAAGCTCAGTGCCCTGG
TGAGGCTTCACGATTTGCTGTGCTGCACCCCTTACTCCTTCTTACCCTCC
CTTCCTGTTTTGGTTCTCAGGCCTTTATGCTGATAGCGATCAAGTGCATC
TTAAGAGCTGGACTGACGCTCTGGTTTCATTGGGTTGGTTATTTGGGATT
TTACTTGATGGTGGTTTTCAGTGCCACACCTTCTCAGTTGGTGATGTTGC
AGTGCGGCTCTGCAGCATTGCTCTGTACCCAGTACTTGGAGGTCAGTACG
GCATCCAGTTAGCCACTTCAGACTTCAGAATCATCTGACCTAATAATACT
CCTTAGATCGACTTCCACTCAAACTACTGGGGTTTTGGGATGCTTGCGGT
CATGCCGCTGCTGCAAATTTTGGACACGAGAGACATTCAAGGGGTGTTAT
TTGGTCCTCTTGCGTGGGTATGTAGTTGAGAGCCAAATGTTGCACCTACC
CCTCTTCTCATTGCTTGCCTTTGCTATCCCATCCTTACCACAGTGTTTCC
TTCTCGCACCTTCCTGCCCATTTACGAACACTCCTGATGAAAGCTCATGA
CATGCAGGCCGAGGGAGTTTGTAAGAACACAGTTGATTATATTTTGAAGA
AGCCGGGTAGAGCTGGACTCAACCATGTTGACTTTGGGGCGCTGTTGGCG
GATTGGTGCTATCGGTTTGGGCTGCTCTATATTGCGTTGCAGCTCTTGCC
AGCCTATGGCCCCAACCCTGATGTACGTCTGTAGGCTGCTTGGTGCCCAA
CGTTGCAACCCTGCTTTTAATTATTTTTGTGCTGTTTACCGCAATGCAGG
TGATTCTCACCCTCTCTCAGCTTATTTTCCCGGAAAGCCAAGGTATATTA
GAGACCAAAGCCGATGCCAATTGGGTGCGGGGAATGGCCCAAGAGCATGT
GAGTCTTGTGGGCTGTAGCTGATAGTGTTCACTCAGTGCCTGCACTTGAA
ACAAGAGGCTAGCACCACCGCCTCCTCACAGCAACCTATCTCTCCTCTCC
TTCCTTCTATAATCCTTACTCTCGCCTGCACTTGTACTTGCAGCTCTCAT
TTGTGAGGTCACCACTGCACCAGCTATGCTTGACGTGCTTTGCAGTGTCA
GCTTGCTCGAGTTTTGTCACGGTGCCCATCAAGCTGAGGGTGTTCCCACG
AACAAGAGGAACGACGACTGACAGTGCCATTGATGATGCACTGGAACGAG
CTCTGCCATACCTGTACGTGCAGGGAGTAAATTCGCTGCCGTTTTGGTTC
ATTTAATCATGTTCGCCCCTAAACCTCAGCCTAGTGCTCTTCATGGAGGT
GCTGCTCTTTCGCATATTTGGCTTGGACGGCCTTGCCACGTTAGGCCTCA
GTAGCAGCACTGACACCCCACAAGTAGATGAAGACATGGATAGCTATTTC
CTCATGGCTGCCTATGATCTGGTGCTCTGGCCGGTGATACTTGTGGCAAC
AACACACTTCTCATTCCAGGTTAGCTTATCTAAGCCCCCACCTTCCTTGT
CTTTGTGCCATATTCTCCTTAAGAGAGCCTGTAGTATGACACAAACTTGA
TGCTTACGGCGTGCACTGACCATGCCAGAGAGGAGCAGAGGAAGCTTTAA
GTGAGTGTGTAAATGAAGAGGTGAGACTGAGGCAAAGGTCGCTGCTAGTT
GTGAATGTGTCATGACCATAACCGCAAAGGGGAAGTTCATGCAATGGCAT
GGCGCTATACGCATGTAGTGCTTCGGCCCATTGATTTTTCACTAATGTGC
TCCCTTTACTCCTTGCTCTTTTGCTCTTGCCTCTGAACCAGGTTGCATTG
GGCAACATGGGGATTAAGATGATAGTACGGGTTTCGCTTGCTTATGCTGT
CCTCATGACAATGTCGGCCATTCCTATGGCAGCACTCATTGGGTCATTTG
GCTTCTCAACTCTCTTGGTGATGAATGCCCTCACTTGCCACTTACCTCTA
CCTCCACCACTCCATGCGCTTCCATCCTCCCCTCTTACTCTTCCTTTTCT
TTCCTCAACTCCCCAGATACTGTTGTTCCGTCATCCCATCATCATTTTGG
TGAATGTGTCTGGGCAGGCCCTCAAGGCAATGGTTTATATGCTTGACAGG
TCTGTAGCTGGTACCACCTTGTAACCCCACTGCCCCTCCTCATATGATAC
TGATACATGACTTTCTCACTCCATTTTATTTCGCTTCCCTTCCCGTTCAG
TTTGACAATGCGCTACTATGGCATAGGGAGGCCTCAACAATTTGGCCCAA
CTGGCATCTTTGGTGTCGATACGCTAATGCACGTCGTGGAGGTATGAGAC
AACCACTTCCCTTGGGTCACTCACTGATATCTATCATGTGGAGCACTGCT
TGCTCACTAATGAGCAATTAATTCCCCTCCCTCCTAAACTACCTTCCTTG
CCACCAGGGTGTGCTCATCTTCATCAAGCTGCTTTTGGGGTTAGCGGTGA
TAATAATTACCCTGGGTTTCAGTGGCCTGGGCTGGGGTGACGTAACGCTG
AGTCCATTGCATGTACACTTAAGCCTGAGAGCTCTGCAGGTACACGCACC
TTTATTGCCAGCTGTAGCTGCGCACTCAATGCTTGCCAATTCATTTTGTT
CGTGACGTGAGTTGTCGTGGTTCTCTGGCCATGACCCAGGTATGGTGGCA
GGAAGCTCATCAACGTTGGCAGGCATTCAGGCTATTTATTCAACACGTAA
GAAGTAAGCCAAGCTGGAAGAGAATCACAGAGGAGGTGAGGAGGCGAAAC
AAAATCAACCTAGCTGCATCTGGTAACACCATACAGTGCGCCCAAGTTTG
CCACCCTTTGCCTTTTGCATTTACCTGCTGCTTTGTTTCGCCTCCACTTT
CAGTCAGTGATGCTTTCACCTTTCACCTCACTTCCATACCACCATCACCT
CTAGTCGCTGGCAAAGCTGAATGAGGAAGGGGAAGTATGTGTCATGTGCA
TGGAGGAGCTTACCTTTTCCTCAGGGATTTCTACACCTTGTAAACCTGTA
CCTCACTACTTTCATGGTATGAATCTCAGTAAGCGCTAGTCCAGCTTAGT
AGCTGCTACTGGTGTGTTGATCTCAGTTATAGAACCCTTCTCATTCCATC
CGTTCTGCTCTCTCCTTGCGTTGGGTGAAGCAAGATCGAATGCTAGAATT
ATGCTTGTTCAACATAACCTTATTGCTGCCGCGCTGAAATCTGCCTCCTC
ACTCTTTACTCATTCAACACAGCTGAGTGTTTGAATCGCTGGATGTATCG
CTCAAGCAAATGTCCCATGTGTCAAGCCGAGATTCTGATGCCAGAAGCTC
CAGAAGCTCCAGGCCCAAGTGTTGGAGAGGCCGAGGCAGTGGCCGAGGCA
GTAGCAGAGGCAGAGGCAGAGGCAGGGGAAAAGACTGCGTCAGGGGCAGG
CCCAGAGAGCAAAAGTGACGTAGGAGAGGAGTTGAAGCCTGGCTATGGTA
TTGGCCCTGAAAGAGAGGAAGGTGTACTAGGGGAAATGGCTTTGGATTCA
GCAGGAGACCAAGAAAGTCGAGAACTCAGAGGTTAGTGTAGTGTTATGCT
AAGAGCTAGAAGCTACAAGCTTTACTGCTATCTTCCATTAACTGTTGCCT
TTCCCTTATTAGATGCCAGGGATCTCACCAGTGAGGTGCAGGGGTGAGCA
GAGAGTCCGTCCCTATTATTTATA
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Coding sequence (CDS) from alignment at C-australica_Contig_1030:181..4054+

>mRNA_C-australica_Contig_1030.1.9 ID=mRNA_C-australica_Contig_1030.1.9|Name=mRNA_C-australica_Contig_1030.1.9|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=2193bp|location=Sequence derived from alignment at C-australica_Contig_1030:181..4054+ (Chrysoparadoxa australica CS_1217)
ATGTTTGGGTACCCTGGCTTGAATCTGAGCCCAAAGGAGGAGGAGCTAAG
CCCCGAGGATACCATCTGGCTGAACTACGTTTTCCTTCTGGAATCCTCTT
TGCTTTTCACCTTCCTTTGTGCTGGCTCACTCTTCATCGGCTTACTGATT
CAACGTGGCCGATCAAATCCAGCTGAGAAGCTCAGTGCCCTGGCCTTTAT
GCTGATAGCGATCAAGTGCATCTTAAGAGCTGGACTGACGCTCTGGTTTC
ATTGGGTTGGTTATTTGGGATTTTACTTGATGGTGGTTTTCAGTGCCACA
CCTTCTCAGTTGGTGATGTTGCAGTGCGGCTCTGCAGCATTGCTCTGTAC
CCAGTACTTGGAGATCGACTTCCACTCAAACTACTGGGGTTTTGGGATGC
TTGCGGTCATGCCGCTGCTGCAAATTTTGGACACGAGAGACATTCAAGGG
GTGTTATTTGGTCCTCTTGCGTGGGCCGAGGGAGTTTGTAAGAACACAGT
TGATTATATTTTGAAGAAGCCGGGTAGAGCTGGACTCAACCATGTTGACT
TTGGGGCGCTGTTGGCGGATTGGTGCTATCGGTTTGGGCTGCTCTATATT
GCGTTGCAGCTCTTGCCAGCCTATGGCCCCAACCCTGATGTGATTCTCAC
CCTCTCTCAGCTTATTTTCCCGGAAAGCCAAGGTATATTAGAGACCAAAG
CCGATGCCAATTGGGTGCGGGGAATGGCCCAAGAGCATCTCTCATTTGTG
AGGTCACCACTGCACCAGCTATGCTTGACGTGCTTTGCAGTGTCAGCTTG
CTCGAGTTTTGTCACGGTGCCCATCAAGCTGAGGGTGTTCCCACGAACAA
GAGGAACGACGACTGACAGTGCCATTGATGATGCACTGGAACGAGCTCTG
CCATACCTCCTAGTGCTCTTCATGGAGGTGCTGCTCTTTCGCATATTTGG
CTTGGACGGCCTTGCCACGTTAGGCCTCAGTAGCAGCACTGACACCCCAC
AAGTAGATGAAGACATGGATAGCTATTTCCTCATGGCTGCCTATGATCTG
GTGCTCTGGCCGGTGATACTTGTGGCAACAACACACTTCTCATTCCAGAG
AGGAGCAGAGGAAGCTTTAAGTGAGTGTGTAAATGAAGAGGTTGCATTGG
GCAACATGGGGATTAAGATGATAGTACGGGTTTCGCTTGCTTATGCTGTC
CTCATGACAATGTCGGCCATTCCTATGGCAGCACTCATTGGGTCATTTGG
CTTCTCAACTCTCTTGGTGATGAATGCCCTCACTTGCCACTTACCTCTAC
CTCCACCACTCCATGCGCTTCCATCCTCCCCTCTTACTCTTCCTTTTCTT
TCCTCAACTCCCCAGATACTGTTGTTCCGTCATCCCATCATCATTTTGGT
GAATGTGTCTGGGCAGGCCCTCAAGGCAATGGTTTATATGCTTGACAGTT
TGACAATGCGCTACTATGGCATAGGGAGGCCTCAACAATTTGGCCCAACT
GGCATCTTTGGTGTCGATACGCTAATGCACGTCGTGGAGGGTGTGCTCAT
CTTCATCAAGCTGCTTTTGGGGTTAGCGGTGATAATAATTACCCTGGGTT
TCAGTGGCCTGGGCTGGGGTGACGTAACGCTGAGTCCATTGCATGTACAC
TTAAGCCTGAGAGCTCTGCAGGTATGGTGGCAGGAAGCTCATCAACGTTG
GCAGGCATTCAGGCTATTTATTCAACACGTAAGAAGTAAGCCAAGCTGGA
AGAGAATCACAGAGGAGTCGCTGGCAAAGCTGAATGAGGAAGGGGAAGTA
TGTGTCATGTGCATGGAGGAGCTTACCTTTTCCTCAGGGATTTCTACACC
TTGTAAACCTGTACCTCACTACTTTCATGCTGAGTGTTTGAATCGCTGGA
TGTATCGCTCAAGCAAATGTCCCATGTGTCAAGCCGAGATTCTGATGCCA
GAAGCTCCAGAAGCTCCAGGCCCAAGTGTTGGAGAGGCCGAGGCAGTGGC
CGAGGCAGTAGCAGAGGCAGAGGCAGAGGCAGGGGAAAAGACTGCGTCAG
GGGCAGGCCCAGAGAGCAAAAGTGACGTAGGAGAGGAGTTGAAGCCTGGC
TATGGTATTGGCCCTGAAAGAGAGGAAGGTGTACTAGGGGAAATGGCTTT
GGATTCAGCAGGAGACCAAGAAAGTCGAGAACTCAGAGGTTAG
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