mRNA_C-australica_Contig_10284.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10284.1.1
Unique NamemRNA_C-australica_Contig_10284.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10284.1.1 vs. uniprot
Match: E4PIJ9_MARAH (Methyl-accepting chemotaxis sensory transducer n=25 Tax=Marinobacter TaxID=2742 RepID=E4PIJ9_MARAH)

HSP 1 Score: 407 bits (1045), Expect = 1.490e-135
Identity = 274/276 (99.28%), Postives = 274/276 (99.28%), Query Frame = 1
Query:    1 RAKSYGIFALVEGQVGYALSETLNEIYDQLTNRTSLLSPALALASEASPALANQAGNAIQRVDESLMVVRDHLDLNVITPMRLEMPWTEYDDLMSGQLAHYDDVKTAAFSVVDSNLRARLESEINQRRLIVVALIAVLLVVVYLYIGFFMSVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQATRVNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNAEQDTETVRG 828
            RAKSYGIFALVEGQVGYALSETLNEIYDQLTNRTSLLSPALALASEASPALANQAGNAIQRVDESLMVVRDHLDLNVITPMRLEMPWTEYDDLMSGQLAHYDDVKTAAFSVVDSNLRARLESEINQRRLIVVALIAVLLVVVYLYIGFFMSVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQATRVN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNAEQDTET RG
Sbjct:  198 RAKSYGIFALVEGQVGYALSETLNEIYDQLTNRTSLLSPALALASEASPALANQAGNAIQRVDESLMVVRDHLDLNVITPMRLEMPWTEYDDLMSGQLAHYDDVKTAAFSVVDSNLRARLESEINQRRLIVVALIAVLLVVVYLYIGFFMSVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQATRVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNAEQDTETGRG 473          
BLAST of mRNA_C-australica_Contig_10284.1.1 vs. uniprot
Match: A0A1I6I4I3_9GAMM (Methyl-accepting chemotaxis protein n=1 Tax=Marinobacter gudaonensis TaxID=375760 RepID=A0A1I6I4I3_9GAMM)

HSP 1 Score: 350 bits (897), Expect = 2.520e-113
Identity = 186/219 (84.93%), Postives = 206/219 (94.06%), Query Frame = 1
Query:    1 RAKSYGIFALVEGQVGYALSETLNEIYDQLTNRTSLLSPALALASEASPALANQAGNAIQRVDESLMVVRDHLDLNVITPMRLEMPWTEYDDLMSGQLAHYDDVKTAAFSVVDSNLRARLESEINQRRLIVVALIAVLLVVVYLYIGFFMSVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQATRVN 657
            RAKSYGI+ALVEGQVGYALSETLNEIYDQLTNR+SLL+PAL++AS+ASPAL  +AG+A+ +VDESLMVVRD LD NVITPMRLEMPWTEYD LMS QL +YD++K AAF VV++NLR RL+SEINQR LI+VAL+AVLLVVVYLYIGFFMSVRTAINRFS+AAR+VAAGDMTTHI LRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQATRVN
Sbjct:  198 RAKSYGIYALVEGQVGYALSETLNEIYDQLTNRSSLLTPALSVASDASPALVAKAGDALNKVDESLMVVRDELDQNVITPMRLEMPWTEYDSLMSAQLGYYDELKQAAFEVVETNLRGRLDSEINQRTLILVALVAVLLVVVYLYIGFFMSVRTAINRFSQAARSVAAGDMTTHIHLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQATRVN 416          
BLAST of mRNA_C-australica_Contig_10284.1.1 vs. uniprot
Match: A0A346S664_9GAMM (Methyl-accepting chemotaxis protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A346S664_9GAMM)

HSP 1 Score: 348 bits (894), Expect = 7.090e-113
Identity = 212/276 (76.81%), Postives = 235/276 (85.14%), Query Frame = 1
Query:    1 RAKSYGIFALVEGQVGYALSETLNEIYDQLTNRTSLLSPALALASEASPALANQAGNAIQRVDESLMVVRDHLDLNVITPMRLEMPWTEYDDLMSGQLAHYDDVKTAAFSVVDSNLRARLESEINQRRLIVVALIAVLLVVVYLYIGFFMSVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQATRVNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNAEQDTETVRG 828
            RAKSYGIFALV+GQVGYALSETLNEIYDQLTNR+SLL+PAL++ +E+SPAL  ++G AI+RVDESLM+VRD LD NVITPMRLEMPW EYD+LMS QLAHYD VK AAF VV++NLR+RL+SE++QRRLI++AL+A+LLVVVYLYIGFFMSVRTAINRFSEAAR VAAGDMTTHI L NRDELGELT EFNNMTDRIAELIRSVSRTTADVDQQATRVND                       XXXXXXXXXXXXXXXXXXXX  NAE+DTET RG
Sbjct:  198 RAKSYGIFALVDGQVGYALSETLNEIYDQLTNRSSLLTPALSVVTESSPALVEKSGGAIRRVDESLMIVRDQLDQNVITPMRLEMPWQEYDELMSEQLAHYDRVKAAAFEVVNANLRSRLDSEMSQRRLIIIALVAILLVVVYLYIGFFMSVRTAINRFSEAARGVAAGDMTTHIMLHNRDELGELTAEFNNMTDRIAELIRSVSRTTADVDQQATRVNDTAAANSEAVARQMDESGQINEAMXXXXXXXXXXXXXXXXXXXXAGNAERDTETGRG 473          
BLAST of mRNA_C-australica_Contig_10284.1.1 vs. uniprot
Match: A0A2G1VAM4_9GAMM (Methyl-accepting chemotaxis protein n=1 Tax=Marinobacter guineae TaxID=432303 RepID=A0A2G1VAM4_9GAMM)

HSP 1 Score: 345 bits (886), Expect = 1.120e-111
Identity = 227/276 (82.25%), Postives = 250/276 (90.58%), Query Frame = 1
Query:    1 RAKSYGIFALVEGQVGYALSETLNEIYDQLTNRTSLLSPALALASEASPALANQAGNAIQRVDESLMVVRDHLDLNVITPMRLEMPWTEYDDLMSGQLAHYDDVKTAAFSVVDSNLRARLESEINQRRLIVVALIAVLLVVVYLYIGFFMSVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQATRVNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNAEQDTETVRG 828
            RAKSYG+FALVEGQVGYALSETLNE+YDQLTNR+SLLSPAL++ SE+SP L +QAG+AI RVDESL VVRD LD NVITPMRLEMPW +YD+L+S QLA +D  K AAF VV++NLR+RLESE+NQR LI++AL+A+LLVVVYLY+GFFMSVRTAINRFS+AARNVAAGDMTTHI LRNRDELGELTTEFNNMTDRIAELIRSV RTTADVDQQATRVND      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NAE+DTET RG
Sbjct:  198 RAKSYGMFALVEGQVGYALSETLNEVYDQLTNRSSLLSPALSVVSESSPDLVSQAGDAIARVDESLTVVRDQLDQNVITPMRLEMPWQDYDELISAQLAPFDQFKAAAFDVVEANLRSRLESEVNQRSLIIIALVAILLVVVYLYVGFFMSVRTAINRFSQAARNVAAGDMTTHIMLRNRDELGELTTEFNNMTDRIAELIRSVGRTTADVDQQATRVNDTAAANSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGNAERDTETGRG 473          
BLAST of mRNA_C-australica_Contig_10284.1.1 vs. uniprot
Match: UPI001E5EFACC (methyl-accepting chemotaxis protein n=1 Tax=Marinobacter sp. F3R08 TaxID=2841559 RepID=UPI001E5EFACC)

HSP 1 Score: 327 bits (837), Expect = 1.580e-104
Identity = 180/215 (83.72%), Postives = 190/215 (88.37%), Query Frame = 1
Query:    1 RAKSYGIFALVEGQVGYALSETLNEIYDQLTNRTSLLSPALALASEASPALANQAGNAIQRVDESLMVVRDHLDLNVITPMRLEMPWTEYDDLMSGQLAHYDDVKTAAFSVVDSNLRARLESEINQRRLIVVALIAVLLVVVYLYIGFFMSVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQA 645
            RAKSYG FALVE QVGYALSETLNEIYDQLTNR+SLLSPALALASEASPA + QAGNAIQRVDESLMVVRD LD NVITPMRLEMPW EYDDLMS QLA+YD +K  AF V+D+NLR RLESE +QR LIVVA        VYLYIGFFMSVRTAINRFS+AAR+VAAGDMTT ISL NRDELGELTTEFNNMTDRIAELIRSVSRTTA+VDQQA
Sbjct:  182 RAKSYGTFALVESQVGYALSETLNEIYDQLTNRSSLLSPALALASEASPAFSQQAGNAIQRVDESLMVVRDQLDHNVITPMRLEMPWAEYDDLMSAQLAYYDQLKMVAFGVLDANLRTRLESEKSQRLLIVVAXXXXXXXXVYLYIGFFMSVRTAINRFSKAARSVAAGDMTTRISLPNRDELGELTTEFNNMTDRIAELIRSVSRTTAEVDQQA 396          
BLAST of mRNA_C-australica_Contig_10284.1.1 vs. uniprot
Match: UPI001C5E3FCC (methyl-accepting chemotaxis protein n=3 Tax=unclassified Marinobacter TaxID=83889 RepID=UPI001C5E3FCC)

HSP 1 Score: 314 bits (805), Expect = 1.410e-99
Identity = 167/216 (77.31%), Postives = 191/216 (88.43%), Query Frame = 1
Query:    4 AKSYGIFALVEGQVGYALSETLNEIYDQLTNRTSLLSPALALASEASPALANQAGNAIQRVDESLMVVRDHLDLNVITPMRLEMPWTEYDDLMSGQLAHYDDVKTAAFSVVDSNLRARLESEINQRRLIVVALIAVLLVVVYLYIGFFMSVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQATR 651
            A++YG FALVEGQVGYALS+ LN IYD LTNR+SLL+PAL++A+EAS  L+++AGN I RV+ESL +VRD LDLNV+TPMRLEMPW EYD L+  QL HYD++  A F VV+ NL  RLE E+NQRRLIVVAL+A+LLVVVYLYIGFFMSVRTAINRF+EAARNVAAGDMTTHI+LRNRDELGELT+EFNNMTDRIAELIRSVS TTADVDQQA R
Sbjct:  199 ARAYGTFALVEGQVGYALSDGLNAIYDGLTNRSSLLAPALSVAAEASDQLSDEAGNTITRVNESLTLVRDALDLNVVTPMRLEMPWQEYDALIRAQLEHYDELTAAIFDVVEGNLSTRLEQEVNQRRLIVVALVAILLVVVYLYIGFFMSVRTAINRFTEAARNVAAGDMTTHINLRNRDELGELTSEFNNMTDRIAELIRSVSGTTADVDQQAAR 414          
BLAST of mRNA_C-australica_Contig_10284.1.1 vs. uniprot
Match: A0A1D9GKH6_9GAMM (Methyl-accepting chemotaxis protein n=1 Tax=Marinobacter salinus TaxID=1874317 RepID=A0A1D9GKH6_9GAMM)

HSP 1 Score: 310 bits (795), Expect = 4.370e-98
Identity = 162/210 (77.14%), Postives = 186/210 (88.57%), Query Frame = 1
Query:    1 RAKSYGIFALVEGQVGYALSETLNEIYDQLTNRTSLLSPALALASEASPALANQAGNAIQRVDESLMVVRDHLDLNVITPMRLEMPWTEYDDLMSGQLAHYDDVKTAAFSVVDSNLRARLESEINQRRLIVVALIAVLLVVVYLYIGFFMSVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTAD 630
            RA++YGIFALVEGQVGYALSETLN +YDQLTNR S+LSPAL++AS+ASP LA +A   I+R++ESL+VVRD LDLNVITPMRLEMPW EYD L+  QL HYD ++T  F  V +NL +RLE E+NQRRLIV+AL+AVLLVVVYLY+GFFMSVRTAINRF+EAARNVAAGDMTTHI L NRDELGELT+EFNNMTDRIAEL+RSVSRTT D
Sbjct:  198 RARAYGIFALVEGQVGYALSETLNGLYDQLTNRDSMLSPALSVASDASPRLAGEASGTIERINESLVVVRDALDLNVITPMRLEMPWKEYDGLIKAQLEHYDALQTVIFDTVSANLSSRLEREVNQRRLIVIALVAVLLVVVYLYVGFFMSVRTAINRFTEAARNVAAGDMTTHIRLSNRDELGELTSEFNNMTDRIAELVRSVSRTTGD 407          
BLAST of mRNA_C-australica_Contig_10284.1.1 vs. uniprot
Match: A0A0J7J7T8_9GAMM (Methyl-accepting chemotaxis protein n=1 Tax=Marinobacter subterrani TaxID=1658765 RepID=A0A0J7J7T8_9GAMM)

HSP 1 Score: 309 bits (792), Expect = 1.220e-97
Identity = 163/211 (77.25%), Postives = 190/211 (90.05%), Query Frame = 1
Query:    1 RAKSYGIFALVEGQVGYALSETLNEIYDQLTNRTSLLSPALALASEASPALANQAGNAIQRVDESLMVVRDHLDLNVITPMRLEMPWTEYDDLMSGQLAHYDDVKTAAFSVVDSNLRARLESEINQRRLIVVALIAVLLVVVYLYIGFFMSVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADV 633
            RAKSYG+FALVEGQVGYALS+ LNEIYDQLTNR+SLLSPAL++ SE+SP L  +AG AI+ VD+SL+ VRD LD NVITPMRL+MPW EYD L++ QL HY+  K+AAF VV++NLR+RL+S+INQR LI++ALIA+LLVVVYLYIGFF+SVRTAI RFS+AAR+VAAGDMT HI LRNRDELG+LTTEFNNMTDRIAELIRSVSRTTADV
Sbjct:  198 RAKSYGMFALVEGQVGYALSDALNEIYDQLTNRSSLLSPALSVVSESSPGLVEKAGEAIRGVDQSLVHVRDVLDQNVITPMRLDMPWQEYDQLVAEQLGHYEQTKSAAFDVVEANLRSRLDSKINQRSLIIIALIAILLVVVYLYIGFFLSVRTAIKRFSQAARSVAAGDMTAHIHLRNRDELGQLTTEFNNMTDRIAELIRSVSRTTADV 408          
BLAST of mRNA_C-australica_Contig_10284.1.1 vs. uniprot
Match: A1TZ83_MARN8 (Methyl-accepting chemotaxis sensory transducer n=20 Tax=Marinobacteraceae TaxID=2887365 RepID=A1TZ83_MARN8)

HSP 1 Score: 308 bits (788), Expect = 4.810e-97
Identity = 165/219 (75.34%), Postives = 184/219 (84.02%), Query Frame = 1
Query:    4 AKSYGIFALVEGQVGYALSETLNEIYDQLTNRTSLLSPALALASEASPALANQAGNAIQRVDESLMVVRDHLDLNVITPMRLEMPWTEYDDLMSGQLAHYDDVKTAAFSVVDSNLRARLESEINQRRLIVVALIAVLLVVVYLYIGFFMSVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQATRVND 660
            A+SYGIFALVEGQVGYALSETLNEIYDQLTNR+SLLSPAL++A EASP LA  A  A+ R +ESLM VRD LDLNVITPMRLE+PW E+D+ +S Q+ +YD +    F VV  NL  RL  +  QR LI+VALIAV+LVVVYLY+GFFMSVR AINRFSEAARNVAAGDMTTHI L NRDELGELT+EFNNMTDRIAEL+RSV  TTADVDQQA RVND
Sbjct:  199 ARSYGIFALVEGQVGYALSETLNEIYDQLTNRSSLLSPALSVAVEASPQLAESASGALTRTEESLMTVRDELDLNVITPMRLELPWQEFDETVSAQMGYYDTLSDRIFDVVAGNLEDRLARQTGQRTLILVALIAVMLVVVYLYVGFFMSVRIAINRFSEAARNVAAGDMTTHIRLNNRDELGELTSEFNNMTDRIAELVRSVGSTTADVDQQAVRVND 417          
BLAST of mRNA_C-australica_Contig_10284.1.1 vs. uniprot
Match: A0A072NHX8_9GAMM (Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) n=1 Tax=Marinobacter nitratireducens TaxID=1137280 RepID=A0A072NHX8_9GAMM)

HSP 1 Score: 305 bits (782), Expect = 3.680e-96
Identity = 165/219 (75.34%), Postives = 186/219 (84.93%), Query Frame = 1
Query:    1 RAKSYGIFALVEGQVGYALSETLNEIYDQLTNRTSLLSPALALASEASPALANQAGNAIQRVDESLMVVRDHLDLNVITPMRLEMPWTEYDDLMSGQLAHYDDVKTAAFSVVDSNLRARLESEINQRRLIVVALIAVLLVVVYLYIGFFMSVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAELIRSVSRTTADVDQQATRVN 657
            +A+SYG FALV GQVGYALSE LN+ YDQLTN+ S LS AL++A +ASPALA +AG  + RV ESL VVRD LDLN+ITPMRLEMPW+EY +L+ GQL HYD +    F +V++NL A+LE   NQR LIVVALIAVLLVVVYLY+GFFMSVRTAINRFSEAAR VAAGDMTT I LRN+DELGELT EFNNMTDRIAELIRSVSRTTADVDQQA+RVN
Sbjct:  197 QARSYGTFALVNGQVGYALSEILNQTYDQLTNQASRLSSALSVAKDASPALAQRAGGTMDRVGESLTVVRDVLDLNIITPMRLEMPWSEYSELIRGQLDHYDKLNNTIFDLVEANLAAKLEQARNQRMLIVVALIAVLLVVVYLYVGFFMSVRTAINRFSEAARGVAAGDMTTRIQLRNKDELGELTAEFNNMTDRIAELIRSVSRTTADVDQQASRVN 415          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10284.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E4PIJ9_MARAH1.490e-13599.28Methyl-accepting chemotaxis sensory transducer n=2... [more]
A0A1I6I4I3_9GAMM2.520e-11384.93Methyl-accepting chemotaxis protein n=1 Tax=Marino... [more]
A0A346S664_9GAMM7.090e-11376.81Methyl-accepting chemotaxis protein n=2 Tax=Gammap... [more]
A0A2G1VAM4_9GAMM1.120e-11182.25Methyl-accepting chemotaxis protein n=1 Tax=Marino... [more]
UPI001E5EFACC1.580e-10483.72methyl-accepting chemotaxis protein n=1 Tax=Marino... [more]
UPI001C5E3FCC1.410e-9977.31methyl-accepting chemotaxis protein n=3 Tax=unclas... [more]
A0A1D9GKH6_9GAMM4.370e-9877.14Methyl-accepting chemotaxis protein n=1 Tax=Marino... [more]
A0A0J7J7T8_9GAMM1.220e-9777.25Methyl-accepting chemotaxis protein n=1 Tax=Marino... [more]
A1TZ83_MARN84.810e-9775.34Methyl-accepting chemotaxis sensory transducer n=2... [more]
A0A072NHX8_9GAMM3.680e-9675.34Methyl-accepting chemotaxis protein I (Serine chem... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10284contigC-australica_Contig_10284:1..828 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog225937.HP15_1310
PFAMsHAMP,MCPsignal
Model size828
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K03406
KEGG Pathwayko02020,ko02030,map02020,map02030
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.44e-136
EggNOG OGsCOG0840@1|root,COG0840@2|Bacteria,1MU9B@1224|Proteobacteria,1RQE2@1236|Gammaproteobacteria,4676E@72275|Alteromonadaceae
DescriptionCOG0840 Methyl-accepting chemotaxis protein
Cds size828
COG categoryNT
BRITEko00000,ko00001,ko02035
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586764.6493707-CDS-C-australica_Contig_10284:0..8281682586764.6493707-CDS-C-australica_Contig_10284:0..828Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10284 1..828 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10284.1.1prot_C-australica_Contig_10284.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10284 1..828 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10284.1.1

>prot_C-australica_Contig_10284.1.1 ID=prot_C-australica_Contig_10284.1.1|Name=mRNA_C-australica_Contig_10284.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=276bp
RAKSYGIFALVEGQVGYALSETLNEIYDQLTNRTSLLSPALALASEASPA
LANQAGNAIQRVDESLMVVRDHLDLNVITPMRLEMPWTEYDDLMSGQLAH
YDDVKTAAFSVVDSNLRARLESEINQRRLIVVALIAVLLVVVYLYIGFFM
SVRTAINRFSEAARNVAAGDMTTHISLRNRDELGELTTEFNNMTDRIAEL
IRSVSRTTADVDQQATRVNDTAAANSEAVARQMEESGQINEAMNQMVEAV
HEVTESAHRVADSASNAEQDTETVRG
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mRNA from alignment at C-australica_Contig_10284:1..828+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10284.1.1 ID=mRNA_C-australica_Contig_10284.1.1|Name=mRNA_C-australica_Contig_10284.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10284:1..828+ (Chrysoparadoxa australica CS_1217)
CGGGCAAAATCCTACGGAATCTTCGCATTGGTCGAGGGGCAGGTAGGTTA CGCCCTGAGCGAAACCCTGAACGAAATCTATGACCAGTTGACTAATCGCA CCTCCTTGCTTTCACCGGCCTTGGCTCTTGCTTCTGAAGCATCGCCGGCC CTTGCCAATCAGGCAGGCAACGCCATTCAACGGGTTGACGAGAGTTTGAT GGTGGTTCGGGATCATCTGGATCTGAACGTGATAACGCCCATGCGTCTGG AAATGCCCTGGACCGAATACGACGATCTGATGTCCGGGCAGTTGGCCCAC TACGACGACGTCAAGACGGCTGCCTTCAGCGTGGTCGACTCGAACCTTCG CGCACGGCTCGAGAGTGAGATCAACCAGCGTCGCCTGATCGTGGTTGCCC TGATCGCCGTGCTGCTTGTGGTTGTCTATCTCTACATCGGCTTCTTCATG TCCGTACGTACTGCCATCAACCGCTTCAGCGAAGCCGCGCGGAACGTTGC CGCCGGCGACATGACCACGCACATCAGTTTGCGCAACCGCGATGAGCTGG GCGAGTTGACGACGGAATTCAATAACATGACCGACCGGATTGCCGAGCTG ATCCGCTCTGTCAGCCGGACGACGGCGGACGTAGACCAGCAGGCCACCCG GGTCAATGACACCGCTGCGGCCAACAGCGAAGCGGTTGCGCGTCAGATGG AAGAAAGCGGCCAGATCAATGAAGCCATGAACCAGATGGTTGAGGCGGTT CATGAAGTCACCGAAAGCGCGCACCGGGTTGCGGACAGCGCGAGCAATGC CGAACAGGACACAGAAACCGTCCGTGGC
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Coding sequence (CDS) from alignment at C-australica_Contig_10284:1..828+

>mRNA_C-australica_Contig_10284.1.1 ID=mRNA_C-australica_Contig_10284.1.1|Name=mRNA_C-australica_Contig_10284.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10284:1..828+ (Chrysoparadoxa australica CS_1217)
CGGGCAAAATCCTACGGAATCTTCGCATTGGTCGAGGGGCAGGTAGGTTA
CGCCCTGAGCGAAACCCTGAACGAAATCTATGACCAGTTGACTAATCGCA
CCTCCTTGCTTTCACCGGCCTTGGCTCTTGCTTCTGAAGCATCGCCGGCC
CTTGCCAATCAGGCAGGCAACGCCATTCAACGGGTTGACGAGAGTTTGAT
GGTGGTTCGGGATCATCTGGATCTGAACGTGATAACGCCCATGCGTCTGG
AAATGCCCTGGACCGAATACGACGATCTGATGTCCGGGCAGTTGGCCCAC
TACGACGACGTCAAGACGGCTGCCTTCAGCGTGGTCGACTCGAACCTTCG
CGCACGGCTCGAGAGTGAGATCAACCAGCGTCGCCTGATCGTGGTTGCCC
TGATCGCCGTGCTGCTTGTGGTTGTCTATCTCTACATCGGCTTCTTCATG
TCCGTACGTACTGCCATCAACCGCTTCAGCGAAGCCGCGCGGAACGTTGC
CGCCGGCGACATGACCACGCACATCAGTTTGCGCAACCGCGATGAGCTGG
GCGAGTTGACGACGGAATTCAATAACATGACCGACCGGATTGCCGAGCTG
ATCCGCTCTGTCAGCCGGACGACGGCGGACGTAGACCAGCAGGCCACCCG
GGTCAATGACACCGCTGCGGCCAACAGCGAAGCGGTTGCGCGTCAGATGG
AAGAAAGCGGCCAGATCAATGAAGCCATGAACCAGATGGTTGAGGCGGTT
CATGAAGTCACCGAAAGCGCGCACCGGGTTGCGGACAGCGCGAGCAATGC
CGAACAGGACACAGAAACCGTCCGTGGC
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