mRNA_C-australica_Contig_10266.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10266.1.1
Unique NamemRNA_C-australica_Contig_10266.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: W4L759_9BACT (Uncharacterized protein n=1 Tax=Candidatus Entotheonella factor TaxID=1429438 RepID=W4L759_9BACT)

HSP 1 Score: 122 bits (306), Expect = 3.390e-34
Identity = 54/83 (65.06%), Postives = 70/83 (84.34%), Query Frame = 1
Query:   19 SVKEGTTNGAALDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267
            +V  GT+  A+ D++A+V+GAG++GL+++Y+LRE+G+ V GFEAGT VGGTWYWNRYPGAR DS+S  Y Y FSQELLDEWDW
Sbjct:    6 AVPNGTSTEASPDFDAIVIGAGVSGLYQLYRLRELGLKVRGFEAGTGVGGTWYWNRYPGARFDSESWTYGYSFSQELLDEWDW 88          
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A661GR88_9GAMM (Cyclohexanone monooxygenase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GR88_9GAMM)

HSP 1 Score: 121 bits (304), Expect = 5.070e-34
Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 1
Query:   55 DYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267
            DY+AVVVGAGIAGL+ +YKLREMG+ V G EA   VGGTWYWN YPGARVDSQS+IYQYWFS EL+ EWDW
Sbjct:    8 DYDAVVVGAGIAGLYAMYKLREMGLRVRGIEAAPAVGGTWYWNCYPGARVDSQSYIYQYWFSDELIQEWDW 78          
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A383EZP6_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A383EZP6_9ZZZZ)

HSP 1 Score: 121 bits (303), Expect = 2.200e-33
Identity = 55/72 (76.39%), Postives = 64/72 (88.89%), Query Frame = 1
Query:   52 LDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267
            LDY+A+VVGAGIAGL+++YKLRE+G+ V  FEAGT VGGTWYWNRYPGAR DS+S+ Y Y FSQELLDEWDW
Sbjct:   17 LDYDAIVVGAGIAGLYQLYKLREIGMKVRLFEAGTGVGGTWYWNRYPGARFDSESYSYAYSFSQELLDEWDW 88          
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A381WEN5_9ZZZZ (Uncharacterized protein (Fragment) n=2 Tax=marine metagenome TaxID=408172 RepID=A0A381WEN5_9ZZZZ)

HSP 1 Score: 117 bits (293), Expect = 1.420e-32
Identity = 52/72 (72.22%), Postives = 63/72 (87.50%), Query Frame = 1
Query:   52 LDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267
            LDY+A+V+GAGI+GL+++YKLR +G+ V  FEAGT VGGTWYWNRYPGAR DS+S+ Y Y FSQELLDEWDW
Sbjct:   17 LDYDAIVIGAGISGLYQLYKLRTIGMRVRVFEAGTGVGGTWYWNRYPGARFDSESYSYAYSFSQELLDEWDW 88          
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A382V5G4_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382V5G4_9ZZZZ)

HSP 1 Score: 119 bits (297), Expect = 3.080e-32
Identity = 55/88 (62.50%), Postives = 70/88 (79.55%), Query Frame = 1
Query:    4 GEAVQSVKEGTTNGAALDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267
            GE+VQ +K        LDY+ +V+GAGI+GL+++YKLRE+G++V  FE GT VGGTWYWNRYPGAR DS+S+ Y Y FSQELLDEW+W
Sbjct:    9 GESVQDIK--------LDYDVIVIGAGISGLYQLYKLRELGLNVRVFETGTGVGGTWYWNRYPGARFDSESYSYAYSFSQELLDEWNW 88          
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A352Q7K3_9GAMM (Cyclohexanone monooxygenase n=2 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A352Q7K3_9GAMM)

HSP 1 Score: 124 bits (312), Expect = 1.410e-31
Identity = 58/78 (74.36%), Postives = 65/78 (83.33%), Query Frame = 1
Query:   34 TTNGAALDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267
            T N   LD++AVVVGAGIAGL+ VYKLREMG+SV G +A   VGGTWYWN YPGARVDSQS+IYQYWFS EL+ EWDW
Sbjct:    7 TENTTKLDFDAVVVGAGIAGLYAVYKLREMGLSVRGIDAAPAVGGTWYWNCYPGARVDSQSYIYQYWFSDELIKEWDW 84          
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A661GUI4_9GAMM (Cyclohexanone monooxygenase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GUI4_9GAMM)

HSP 1 Score: 121 bits (304), Expect = 1.790e-30
Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = 1
Query:   55 DYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267
            DY+AVVVGAGIAGL+ +YKLREMG+ V G EA   VGGTWYWN YPGARVDSQS+IYQYWFS EL+ EWDW
Sbjct:    7 DYDAVVVGAGIAGLYAMYKLREMGLRVRGIEAAPAVGGTWYWNCYPGARVDSQSYIYQYWFSDELIQEWDW 77          
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A2A5BSS1_9GAMM (Cyclohexanone monooxygenase n=1 Tax=Cellvibrionales bacterium TaxID=2026722 RepID=A0A2A5BSS1_9GAMM)

HSP 1 Score: 121 bits (304), Expect = 1.860e-30
Identity = 54/71 (76.06%), Postives = 61/71 (85.92%), Query Frame = 1
Query:   55 DYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267
            DY+A+VVGAG+AGL+ VYKLREMG+ V G EA   VGGTWYWN YPGARVDSQS+IYQYWFS EL+ EWDW
Sbjct:   13 DYDAIVVGAGLAGLYAVYKLREMGLRVHGIEAAPAVGGTWYWNCYPGARVDSQSYIYQYWFSDELIQEWDW 83          
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A5N9GP00_9CHLR (NAD(P)/FAD-dependent oxidoreductase n=1 Tax=SAR202 cluster bacterium TaxID=2030829 RepID=A0A5N9GP00_9CHLR)

HSP 1 Score: 121 bits (304), Expect = 1.920e-30
Identity = 57/88 (64.77%), Postives = 70/88 (79.55%), Query Frame = 1
Query:    4 GEAVQSVKEGTTNGAALDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267
            G+ VQ +K         DY+A+V+GAGIAGL+++YKLRE+G++V  FEAGT VGGTWYWNRYPGAR DS+S+ Y Y FSQELLDEWDW
Sbjct:    9 GQTVQDIKT--------DYDAIVIGAGIAGLYQLYKLRELGLNVRVFEAGTGVGGTWYWNRYPGARFDSESYSYAYSFSQELLDEWDW 88          
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Match: A0A1Y5FR78_9GAMM (Cyclohexanone monooxygenase n=1 Tax=Gammaproteobacteria bacterium 54_18_T64 TaxID=1856296 RepID=A0A1Y5FR78_9GAMM)

HSP 1 Score: 121 bits (303), Expect = 2.590e-30
Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 1
Query:   34 TTNGAALDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEAGTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW 267
            TT G   +Y+A+VVGAGIAGL+ +Y+LREMG+ V G EA   VGGTWYWN YPGARVDSQS+IYQYWFS EL+ EW+W
Sbjct:    7 TTQGVEQEYDAIVVGAGIAGLYAIYRLREMGLRVRGIEAAPAVGGTWYWNCYPGARVDSQSYIYQYWFSDELIQEWNW 84          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10266.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W4L759_9BACT3.390e-3465.06Uncharacterized protein n=1 Tax=Candidatus Entothe... [more]
A0A661GR88_9GAMM5.070e-3477.46Cyclohexanone monooxygenase (Fragment) n=1 Tax=Gam... [more]
A0A383EZP6_9ZZZZ2.200e-3376.39Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A381WEN5_9ZZZZ1.420e-3272.22Uncharacterized protein (Fragment) n=2 Tax=marine ... [more]
A0A382V5G4_9ZZZZ3.080e-3262.50Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A352Q7K3_9GAMM1.410e-3174.36Cyclohexanone monooxygenase n=2 Tax=Porticoccaceae... [more]
A0A661GUI4_9GAMM1.790e-3077.46Cyclohexanone monooxygenase (Fragment) n=1 Tax=Gam... [more]
A0A2A5BSS1_9GAMM1.860e-3076.06Cyclohexanone monooxygenase n=1 Tax=Cellvibrionale... [more]
A0A5N9GP00_9CHLR1.920e-3064.77NAD(P)/FAD-dependent oxidoreductase n=1 Tax=SAR202... [more]
A0A1Y5FR78_9GAMM2.590e-3069.23Cyclohexanone monooxygenase n=1 Tax=Gammaproteobac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10266contigC-australica_Contig_10266:6..272 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog420662.Mpe_A0898
PFAMsFMO-like,K_oxygenase,Pyr_redox_2,Pyr_redox_3
Model size267
Max annot lvl1224|Proteobacteria
KEGG rclassRC00662,RC01550,RC03250
KEGG koko:K03379,ko:K18371
KEGG ReactionR02231,R06622,R10704
KEGG Pathwayko00640,ko00930,ko01120,ko01220,map00640,map00930,map01120,map01220
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.09e-30
EggNOG OGsCOG2072@1|root,COG2072@2|Bacteria,1MUQH@1224|Proteobacteria
EC1.14.13.22,1.14.13.226
Descriptionflavoprotein involved in K transport
Cds size267
COG categoryP
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586763.34759-CDS-C-australica_Contig_10266:5..2721682586763.34759-CDS-C-australica_Contig_10266:5..272Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10266 6..272 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10266.1.1prot_C-australica_Contig_10266.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10266 6..272 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10266.1.1

>prot_C-australica_Contig_10266.1.1 ID=prot_C-australica_Contig_10266.1.1|Name=mRNA_C-australica_Contig_10266.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=89bp
MGEAVQSVKEGTTNGAALDYEAVVVGAGIAGLHEVYKLREMGVSVIGFEA
GTDVGGTWYWNRYPGARVDSQSHIYQYWFSQELLDEWDW
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mRNA from alignment at C-australica_Contig_10266:6..272-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10266.1.1 ID=mRNA_C-australica_Contig_10266.1.1|Name=mRNA_C-australica_Contig_10266.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=267bp|location=Sequence derived from alignment at C-australica_Contig_10266:6..272- (Chrysoparadoxa australica CS_1217)
ATGGGCGAAGCAGTACAGAGCGTTAAGGAGGGCACCACCAACGGCGCCGC CCTTGATTACGAGGCTGTTGTGGTGGGCGCCGGCATCGCCGGGCTCCATG AGGTGTACAAGCTGCGCGAGATGGGCGTGTCCGTGATCGGCTTCGAGGCC GGCACCGATGTAGGCGGCACCTGGTACTGGAATCGCTACCCGGGCGCCCG CGTGGATTCGCAGTCGCACATCTATCAGTACTGGTTCTCGCAGGAGCTGC TGGACGAGTGGGACTGG
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Coding sequence (CDS) from alignment at C-australica_Contig_10266:6..272-

>mRNA_C-australica_Contig_10266.1.1 ID=mRNA_C-australica_Contig_10266.1.1|Name=mRNA_C-australica_Contig_10266.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=267bp|location=Sequence derived from alignment at C-australica_Contig_10266:6..272- (Chrysoparadoxa australica CS_1217)
ATGGGCGAAGCAGTACAGAGCGTTAAGGAGGGCACCACCAACGGCGCCGC
CCTTGATTACGAGGCTGTTGTGGTGGGCGCCGGCATCGCCGGGCTCCATG
AGGTGTACAAGCTGCGCGAGATGGGCGTGTCCGTGATCGGCTTCGAGGCC
GGCACCGATGTAGGCGGCACCTGGTACTGGAATCGCTACCCGGGCGCCCG
CGTGGATTCGCAGTCGCACATCTATCAGTACTGGTTCTCGCAGGAGCTGC
TGGACGAGTGGGACTGG
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