prot_C-australica_Contig_1024.7.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1024.7.1
Unique Nameprot_C-australica_Contig_1024.7.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length168
Homology
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BLAST of mRNA_C-australica_Contig_1024.7.1 vs. uniprot
Match: D7FR40_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR40_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 2.220e-14
Identity = 49/106 (46.23%), Postives = 71/106 (66.98%), Query Frame = 0 
Query:   63 VPPDASKYQTESQRRRSLPLSQLKRRKKKKNEREDLSGQGELRPMVAKTDRRSRLQGEDYWIDNEELEKSRA-RESEREAAAQRRSTLQEGQFTREKLREEIISPW 167
             PP     QTE+QRRR+LPLS+LKR K KK   ++   +GE+RP+V KTDR S L+GEDYWID  E+++ +A RE++ +A A         QF + K++ EI++P+
Sbjct:  149 APPGLESLQTENQRRRALPLSKLKRVKPKKRAAKE-EEEGEIRPLVLKTDRESVLRGEDYWIDYREVDRKKAIREAKAKAPAP-------DQFAQSKMKAEIVNPY 246
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BLAST of mRNA_C-australica_Contig_1024.7.1 vs. uniprot
Match: A0A835YJZ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJZ1_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.780e-13
Identity = 53/115 (46.09%), Postives = 72/115 (62.61%), Query Frame = 0 
Query:   58 ANELNVPPDASKYQTESQRRRSLPLSQLKRRKKKKNEREDLSGQGELRPMVAKT-DRRSRLQGEDYWID----NEELEKSRARESEREAAAQRRSTLQEGQFTREKLREEIISPW 167
            +N+ + PPD S +Q++SQ+RR+ PLSQLKR++K K  +E    +GELRP+V K  +  S LQGEDYWID    NE+ +K              + T  E QF  EKLREEI+SP+
Sbjct:   47 SNQPDQPPDVSDFQSDSQKRRNRPLSQLKRQRKVKQVQEP---EGELRPLVKKERNSMSVLQGEDYWIDLSLVNEDNDKPV------------KPTPTEDQFKDEKLREEIVSPY 146
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1024.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR40_ECTSI2.220e-1446.23Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YJZ1_9STRA1.780e-1346.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..167
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 90..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1024contigC-australica_Contig_1024:12594..13295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1024.7.1mRNA_C-australica_Contig_1024.7.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1024 12225..13439 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1024.7.1 ID=prot_C-australica_Contig_1024.7.1|Name=mRNA_C-australica_Contig_1024.7.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=168bp
MMIHLFLCLLLTASCSGFLRTAPLPLAGSWHTLSKGHTPPLFMSEEPFSA
QRRQEAKANELNVPPDASKYQTESQRRRSLPLSQLKRRKKKKNEREDLSG
QGELRPMVAKTDRRSRLQGEDYWIDNEELEKSRARESEREAAAQRRSTLQ
EGQFTREKLREEIISPW*
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