mRNA_C-australica_Contig_10230.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10230.1.1
Unique NamemRNA_C-australica_Contig_10230.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: UPI000415D989 (hypothetical protein n=1 Tax=Oceanicaulis alexandrii TaxID=153233 RepID=UPI000415D989)

HSP 1 Score: 332 bits (852), Expect = 1.500e-111
Identity = 173/269 (64.31%), Postives = 220/269 (81.78%), Query Frame = 1
Query:    1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807
            MRISTQAASQ+ALMDLMRAQR+A+DARDQLA+GKKA DLKG+AN AET+++AR A+ R+E+F T+N R+ +RLE+QDLAY+E+S AAT+LR ALTT DG+ +M++V+E FD+  AA+N +F  S+VF G+RTD+ P  A T+ADLQAA PD SA+F+NA  RQT  I+E  TID+N TASEV  DLMAS ERIADFNAGPDGPFDG +T NQQAFL++E+AN+IAAF+TIN AM ENGS+Q ++E +   H+ RSDYL   +A  E+AD
Sbjct:    1 MRISTQAASQAALMDLMRAQREAYDARDQLASGKKAPDLKGYANTAETIISARAAQQRSESFATSNSRIMNRLEIQDLAYQELSQAATDLRTALTTNDGSFMMDKVQEVFDQASAALNMRFNGSYVFGGVRTDALPFTADTIADLQAAAPDVSAMFDNAPRRQTTMIEETITIDINSTASEVGTDLMASIERIADFNAGPDGPFDGQITENQQAFLETELANIIAAFDTINVAMAENGSRQKQVENATTGHEKRSDYLTIMVAGIEDAD 269          
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A5M6ZE63_9PROT (Flagellin n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZE63_9PROT)

HSP 1 Score: 332 bits (850), Expect = 3.030e-111
Identity = 171/269 (63.57%), Postives = 220/269 (81.78%), Query Frame = 1
Query:    1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807
            MRISTQAA+QSALMDLMRAQR+AFDAR+Q++TG+KA DLKG+ N AE +++ R A+ R +++++ N RL +RL VQDLAYRE+S+AAT+LR  LTT+DGT LMN+V+EAFDR V A+NT+F  S VF G+RTD+ P+N TTL  LQA + D    F +A  RQTA+ID+N TI+VNRTA+EV GDLM  F R+ADFN GPDGPFDGP+ ++QQ+F+Q+EIAN I+AFE IN+AMGENG+KQAR+EAS+R H+ R DYL+  +AD EEAD
Sbjct:    1 MRISTQAAAQSALMDLMRAQREAFDAREQVSTGRKAPDLKGYGNSAEVIISTRAAQTRVDSYVSANTRLENRLAVQDLAYRELSEAATDLRETLTTSDGTFLMNKVQEAFDRVVIALNTRFNGSHVFGGVRTDAQPVNITTLGQLQA-LGDPMDAFSSASRRQTAQIDDNLTIEVNRTAAEVAGDLMGVFRRLADFNDGPDGPFDGPMNSSQQSFIQTEIANAISAFERINEAMGENGAKQARVEASVRGHKAREDYLKRMLADLEEAD 268          
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A3UFN8_9PROT (Flagellin n=2 Tax=unclassified Oceanicaulis TaxID=2632123 RepID=A3UFN8_9PROT)

HSP 1 Score: 330 bits (847), Expect = 8.640e-111
Identity = 172/269 (63.94%), Postives = 219/269 (81.41%), Query Frame = 1
Query:    1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807
            MRISTQAASQ+AL DLMRAQR+A+DAR QLA+GKKA DLKG+AN AET++ A+ A+ R+E+F+  NER+ +RLE+QDLAY+E+S AAT+LR ALTT DG+ +M++V+E FDR  AA+N +F  SFVF G RTD+ P  A T+ADLQAAVPD SA F+NA  RQT +I+E  TIDVN TASEV  +LMAS ERIADFNAGPDGPFDG +T NQQAFL++E+AN+I+AF+TIN AM ENG++Q ++E S+  H+ RSDYL+  +A  E+AD
Sbjct:    1 MRISTQAASQAALSDLMRAQREAYDARQQLASGKKAPDLKGYANSAETIIAAKAAQKRSESFVGANERVLNRLEIQDLAYQELSTAATDLRTALTTNDGSFMMDKVQEVFDRASAALNMRFNGSFVFGGRRTDAVPFTADTIADLQAAVPDVSATFQNAADRQTTKIEETITIDVNATASEVGTELMASIERIADFNAGPDGPFDGQITENQQAFLETELANIISAFDTINVAMAENGARQKQLEGSITGHEKRSDYLEIMVAGIEDAD 269          
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: UPI001EDD9DAF (hypothetical protein n=1 Tax=Shewanella sp. ER-Te-42B-Light TaxID=2872342 RepID=UPI001EDD9DAF)

HSP 1 Score: 328 bits (842), Expect = 4.960e-110
Identity = 168/269 (62.45%), Postives = 219/269 (81.41%), Query Frame = 1
Query:    1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807
            MRISTQAASQSALMDLMRAQR+AFDAR+QL+TG+KA DLKG+ N AE +++AR A+VR + +++ N RL +RLEVQDLAYRE+SD+ +ELR  LTT+DGT LMN+V+E+FDR V A+NT+F  S VF+G+RTD+ P+  +T+  LQA + D    F+NA  RQ+ +ID+N  +DVN TASEV GDLM  F R+ADFN GPDGPF+GP+TA QQAF+Q+EI NVIAAFE +N+AMGENG++QA++EAS+R H+ R+DYL   +AD E+AD
Sbjct:    1 MRISTQAASQSALMDLMRAQREAFDAREQLSTGRKAPDLKGYGNSAEAIISARSAQVRVDNYVSANTRLGNRLEVQDLAYRELSDSVSELRETLTTSDGTFLMNKVQESFDRVVIALNTRFNGSHVFAGVRTDAQPMTVSTIGQLQA-LGDPMDAFDNASRRQSTQIDDNLAVDVNATASEVAGDLMGVFRRLADFNDGPDGPFNGPMTAAQQAFIQTEITNVIAAFEHVNEAMGENGARQAKVEASVRGHEARADYLTRMLADLEDAD 268          
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A4S2GXN2_9PROT (Flagellin n=1 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4S2GXN2_9PROT)

HSP 1 Score: 310 bits (795), Expect = 6.750e-103
Identity = 168/269 (62.45%), Postives = 211/269 (78.44%), Query Frame = 1
Query:    1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807
            MRISTQAA+QSALMDLMRAQRD+FDAR+QLATGKKA DLKG+ +QAET+++ARGA  R+E+F T  +RL SRL+VQDLA REMSDA  ELR +LTT DGT LM EVRE+F+R V A+NT+F  S+VFSG RTD++     TLADLQAA P  +++F N+  +QTA I+E  T++V   A +   D+MA FERIADF+AGPDGPFDG VT  QQAFLQ+EIAN IAAF+ IND M +NG+ Q R+E S+ +  +R+DYL  ++AD E+AD
Sbjct:    1 MRISTQAAAQSALMDLMRAQRDSFDAREQLATGKKAPDLKGYGHQAETILSARGALERSESFTTAAKRLQSRLDVQDLALREMSDAVAELRTSLTTNDGTYLMTEVRESFERIVTALNTRFNGSYVFSGTRTDAAAFTGQTLADLQAA-PSIASLFGNSDRKQTAMIEEEVTVEVAPLAEDFAADVMAIFERIADFDAGPDGPFDGAVTPAQQAFLQTEIANAIAAFDEINDTMAKNGAMQERLEKSIEAQTERTDYLTLFLADLEDAD 268          
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A2U2BRX3_9PROT (Flagellin n=1 Tax=Marinicauda salina TaxID=2135793 RepID=A0A2U2BRX3_9PROT)

HSP 1 Score: 291 bits (745), Expect = 2.670e-95
Identity = 154/269 (57.25%), Postives = 201/269 (74.72%), Query Frame = 1
Query:    1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807
            MRISTQAA+QSAL+DLMRAQR++F+AR Q+ TGK A DLKG+ + +ET+  AR A+ R ++F+  NERL SRL++QDLA+RE+SDAA +LRVALTT D + LMNEV++ F+R   A+NT+F  SF+F+G R D+ P+NA ++ADLQAA PD  AVFENA   QT  IDE    ++   A +V  +L A  ER+ADF+AGPDGPFDG  T  QQ FLQ+EI NVIAAF+TIN  MGENGS   R+E ++ +HQ R+D+L   I+D E+ D
Sbjct:    1 MRISTQAANQSALLDLMRAQRESFEARQQVTTGKAAPDLKGYGHASETITAARSAQTRADSFVKANERLLSRLDIQDLAFRELSDAADQLRVALTTDDTSMLMNEVKDVFERAKNALNTRFQGSFLFAGTRIDTPPVNADSIADLQAAAPDVGAVFENADRAQTQLIDEGVNAEIGFLAQDVGEELFAVIERVADFDAGPDGPFDGRATPAQQNFLQTEIQNVIAAFDTINQKMGENGSLYRRVETAVDTHQKRADFLTTMISDIEDVD 269          
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A3T0EC85_9PROT (Flagellin n=1 Tax=Glycocaulis alkaliphilus TaxID=1434191 RepID=A0A3T0EC85_9PROT)

HSP 1 Score: 289 bits (739), Expect = 2.100e-94
Identity = 158/269 (58.74%), Postives = 200/269 (74.35%), Query Frame = 1
Query:    1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807
            MRISTQAASQSALMDLMRAQR  +++  Q++TG KA DLKG+ N+ ET++ ARGA  R++ F+  ++RL+SRL+VQDLA  EMSDA  +LR+ALTT DGT LMN+V+ AF R  AA+NT+F  SF+FSG RTD+ P  A T+A +Q A  D + +F N+   QT RI+ENTT++    A E+  DLMA F RIADFNAGPDGPFDG VT  QQ FL +EI NVIAAFE I+ A+G+NGS QAR+E + +S+  RSDYL+  IA  EE D
Sbjct:    1 MRISTQAASQSALMDLMRAQRQLYESGQQVSTGLKAPDLKGYGNEVETILFARGALARSDNFVEASKRLASRLDVQDLALNEMSDAVQDLRLALTTNDGTFLMNDVQAAFSRFSAALNTQFNGSFIFSGTRTDAVPFTADTIAQVQGAA-DIADLFHNSSKSQTGRIEENTTVETGFLADELAADLMAIFARIADFNAGPDGPFDGTVTTVQQEFLSTEIGNVIAAFENISSAIGKNGSLQARLETAQQSNAQRSDYLKTMIAGMEEVD 268          
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A3D5ZXH4_9PROT (Flagellin n=2 Tax=Maricaulaceae TaxID=2800061 RepID=A0A3D5ZXH4_9PROT)

HSP 1 Score: 283 bits (723), Expect = 6.150e-92
Identity = 153/269 (56.88%), Postives = 200/269 (74.35%), Query Frame = 1
Query:    1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807
            MR+STQAASQSALMDLMRAQR+ +++  Q++TG KA DLKG+ NQAET++ ARGA  R++ F+  ++RL+SRL+VQDLA  EMS+A  +LR+ALTT DG+ LM +V+ AF R   A+NT+F  SF+F G RTD+ P  A T+AD+Q A  + + +F+N+   QT RI+ENTT++    AS++  DLM  FERIADFNAGPDGPFDG VT  QQ FL +EI+NVIAAFE I+ A+  NGS QAR+E +  ++  RSDYL   IA  EEAD
Sbjct:    4 MRVSTQAASQSALMDLMRAQRELYESGQQISTGLKAPDLKGYGNQAETILFARGALARSDNFVEASKRLASRLDVQDLALNEMSEAVQDLRLALTTNDGSFLMADVQAAFSRFTGALNTQFNGSFIFGGTRTDTPPFTANTIADVQGAA-NIADLFQNSAQAQTGRIEENTTVETGFLASDLASDLMGIFERIADFNAGPDGPFDGTVTEAQQNFLSTEISNVIAAFENISTAVARNGSMQARLETAQANNAQRSDYLTTMIAGMEEAD 271          
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A4S2HD97_9PROT (Flagellin n=1 Tax=Marinicauda pacifica TaxID=1133559 RepID=A0A4S2HD97_9PROT)

HSP 1 Score: 276 bits (707), Expect = 1.480e-89
Identity = 152/269 (56.51%), Postives = 194/269 (72.12%), Query Frame = 1
Query:    1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807
            MRISTQAASQSALMDLMRAQRDAF+AR+Q +TGK+A DLKG+ ++AET++ ARGA  R E+F +  +RL +RL +Q+LA  E+S A  +LR ALTT D T +M EV E+FDR  AA+NTK   S++F G RTD+ P NA +LADLQAA      VF+N+  +QT  IDE+TT+DV   AS+   D+M  FERIADF+AGP+GPFDGPV A QQAFL++EIAN + AFE IN     NG+ Q RIE  + +  DR +YL  ++ D E  D
Sbjct:    1 MRISTQAASQSALMDLMRAQRDAFEAREQYSTGKRAPDLKGYGHEAETILAARGALERNESFNSAAKRLDNRLSIQNLALEEISGAVKDLREALTTGDATYMMTEVEESFDRIRAALNTKSNGSYIFGGTRTDTPPFNANSLADLQAAAA-IGDVFDNSDRKQTMLIDEDTTVDVGPLASDFATDIMRVFERIADFDAGPNGPFDGPVDAAQQAFLRTEIANTVQAFEQINSETARNGAMQQRIEGEITAQGDRKNYLTQFVEDVEGVD 268          
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Match: A0A0P7VXZ9_9PROT (Flagellin n=1 Tax=Oceanicaulis sp. HLUCCA04 TaxID=1666904 RepID=A0A0P7VXZ9_9PROT)

HSP 1 Score: 275 bits (704), Expect = 4.210e-89
Identity = 151/269 (56.13%), Postives = 199/269 (73.98%), Query Frame = 1
Query:    1 MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLMTARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGTALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVPDTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGPDGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRSHQDRSDYLQGWIADFEEAD 807
            MRISTQAASQSALMDLMRAQR+ +++  Q++TG KA DLKG+ N+AET++ ARGA  R++ F+  ++RL+SRLEVQDLA  EMSDA  ELR+ALTT DGT LM ++  AF R  +A+NT+F  S++F G RTD+ P    +++D+Q A  D + +F+NA++ QT R++ENTT++    ASE+  +LM  FERIADF+AGPDGPFDG VT  QQ +L  EIANVI  FE I+ A+G NGS Q+R+E +  S+  RSDYL   IA  EEAD
Sbjct:    1 MRISTQAASQSALMDLMRAQRELYESGQQVSTGLKAPDLKGYGNEAETILFARGALARSDNFVDASKRLASRLEVQDLALTEMSDAVQELRMALTTNDGTFLMADIEAAFGRFSSALNTQFNGSYIFGGTRTDAEPFTGKSISDVQGAA-DIADLFQNAENAQTGRVEENTTVETGFLASELGTELMEIFERIADFDAGPDGPFDGTVTEAQQDYLSGEIANVINVFEDISVALGANGSLQSRLETAQLSNAQRSDYLTEMIAGLEEAD 268          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10230.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000415D9891.500e-11164.31hypothetical protein n=1 Tax=Oceanicaulis alexandr... [more]
A0A5M6ZE63_9PROT3.030e-11163.57Flagellin n=1 Tax=Alkalicaulis satelles TaxID=2609... [more]
A3UFN8_9PROT8.640e-11163.94Flagellin n=2 Tax=unclassified Oceanicaulis TaxID=... [more]
UPI001EDD9DAF4.960e-11062.45hypothetical protein n=1 Tax=Shewanella sp. ER-Te-... [more]
A0A4S2GXN2_9PROT6.750e-10362.45Flagellin n=1 Tax=Marinicauda algicola TaxID=20298... [more]
A0A2U2BRX3_9PROT2.670e-9557.25Flagellin n=1 Tax=Marinicauda salina TaxID=2135793... [more]
A0A3T0EC85_9PROT2.100e-9458.74Flagellin n=1 Tax=Glycocaulis alkaliphilus TaxID=1... [more]
A0A3D5ZXH4_9PROT6.150e-9256.88Flagellin n=2 Tax=Maricaulaceae TaxID=2800061 RepI... [more]
A0A4S2HD97_9PROT1.480e-8956.51Flagellin n=1 Tax=Marinicauda pacifica TaxID=11335... [more]
A0A0P7VXZ9_9PROT4.210e-8956.13Flagellin n=1 Tax=Oceanicaulis sp. HLUCCA04 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10230contigC-australica_Contig_10230:24..830 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog314254.OA2633_13360
Preferred nameflgL
PFAMsFlagellin_C,Flagellin_N
Model size807
Max annot lvl2|Bacteria
KEGG koko:K02397
KEGG Pathwayko02040,map02040
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.42e-111
EggNOG OGsCOG1344@1|root,COG1344@2|Bacteria
Descriptionbacterial-type flagellum-dependent cell motility
Cds size807
COG categoryN
BRITEko00000,ko00001,ko02035
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586761.0962193-CDS-C-australica_Contig_10230:23..8301682586761.0962193-CDS-C-australica_Contig_10230:23..830Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10230 24..830 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10230.1.1prot_C-australica_Contig_10230.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10230 24..830 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10230.1.1

>prot_C-australica_Contig_10230.1.1 ID=prot_C-australica_Contig_10230.1.1|Name=mRNA_C-australica_Contig_10230.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=269bp
MRISTQAASQSALMDLMRAQRDAFDARDQLATGKKASDLKGFANQAETLM
TARGAKVRTETFITTNERLSSRLEVQDLAYREMSDAATELRVALTTADGT
ALMNEVREAFDRTVAAVNTKFGDSFVFSGLRTDSSPLNATTLADLQAAVP
DTSAVFENAQSRQTARIDENTTIDVNRTASEVIGDLMASFERIADFNAGP
DGPFDGPVTANQQAFLQSEIANVIAAFETINDAMGENGSKQARIEASLRS
HQDRSDYLQGWIADFEEAD
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mRNA from alignment at C-australica_Contig_10230:24..830+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10230.1.1 ID=mRNA_C-australica_Contig_10230.1.1|Name=mRNA_C-australica_Contig_10230.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=807bp|location=Sequence derived from alignment at C-australica_Contig_10230:24..830+ (Chrysoparadoxa australica CS_1217)
ATGCGTATTTCAACACAAGCCGCCTCCCAGTCCGCTCTGATGGACCTGAT GCGTGCCCAGCGTGACGCCTTTGATGCGCGCGATCAGCTCGCTACTGGCA AAAAGGCGTCCGACCTCAAAGGCTTTGCCAATCAGGCCGAGACCCTGATG ACGGCGCGCGGCGCAAAAGTGCGGACCGAAACCTTCATCACGACCAATGA GCGTCTGTCTTCGCGCCTTGAGGTCCAGGATCTGGCCTATCGAGAGATGT CCGATGCGGCCACAGAACTGCGTGTGGCGCTGACGACAGCTGATGGCACC GCGCTGATGAATGAAGTGCGAGAGGCTTTCGATCGGACCGTCGCCGCGGT CAATACCAAGTTTGGCGACTCCTTTGTCTTCTCCGGTTTGCGCACCGACT CCTCGCCTTTGAACGCCACAACGCTTGCAGACCTTCAGGCTGCCGTGCCG GACACCAGTGCCGTGTTTGAAAACGCGCAAAGCCGTCAGACCGCACGCAT TGACGAGAACACGACGATTGATGTGAACCGCACCGCATCCGAAGTCATCG GCGACCTCATGGCCTCGTTTGAGCGCATTGCCGACTTTAACGCAGGCCCG GATGGCCCGTTTGATGGGCCCGTGACAGCCAACCAGCAGGCCTTCCTGCA AAGCGAGATCGCGAATGTGATTGCTGCGTTCGAGACGATTAATGACGCGA TGGGCGAAAACGGGTCCAAACAGGCCCGCATTGAAGCCAGCCTGAGAAGC CACCAGGACCGCAGCGATTATCTTCAAGGCTGGATTGCCGACTTTGAAGA GGCTGAC
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Coding sequence (CDS) from alignment at C-australica_Contig_10230:24..830+

>mRNA_C-australica_Contig_10230.1.1 ID=mRNA_C-australica_Contig_10230.1.1|Name=mRNA_C-australica_Contig_10230.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=807bp|location=Sequence derived from alignment at C-australica_Contig_10230:24..830+ (Chrysoparadoxa australica CS_1217)
ATGCGTATTTCAACACAAGCCGCCTCCCAGTCCGCTCTGATGGACCTGAT
GCGTGCCCAGCGTGACGCCTTTGATGCGCGCGATCAGCTCGCTACTGGCA
AAAAGGCGTCCGACCTCAAAGGCTTTGCCAATCAGGCCGAGACCCTGATG
ACGGCGCGCGGCGCAAAAGTGCGGACCGAAACCTTCATCACGACCAATGA
GCGTCTGTCTTCGCGCCTTGAGGTCCAGGATCTGGCCTATCGAGAGATGT
CCGATGCGGCCACAGAACTGCGTGTGGCGCTGACGACAGCTGATGGCACC
GCGCTGATGAATGAAGTGCGAGAGGCTTTCGATCGGACCGTCGCCGCGGT
CAATACCAAGTTTGGCGACTCCTTTGTCTTCTCCGGTTTGCGCACCGACT
CCTCGCCTTTGAACGCCACAACGCTTGCAGACCTTCAGGCTGCCGTGCCG
GACACCAGTGCCGTGTTTGAAAACGCGCAAAGCCGTCAGACCGCACGCAT
TGACGAGAACACGACGATTGATGTGAACCGCACCGCATCCGAAGTCATCG
GCGACCTCATGGCCTCGTTTGAGCGCATTGCCGACTTTAACGCAGGCCCG
GATGGCCCGTTTGATGGGCCCGTGACAGCCAACCAGCAGGCCTTCCTGCA
AAGCGAGATCGCGAATGTGATTGCTGCGTTCGAGACGATTAATGACGCGA
TGGGCGAAAACGGGTCCAAACAGGCCCGCATTGAAGCCAGCCTGAGAAGC
CACCAGGACCGCAGCGATTATCTTCAAGGCTGGATTGCCGACTTTGAAGA
GGCTGAC
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