mRNA_C-australica_Contig_999.5.3 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_999.5.3
Unique NamemRNA_C-australica_Contig_999.5.3
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_999.5.3 vs. uniprot
Match: A0A835ZQ42_9STRA (Tubulin-tyrosine ligase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ42_9STRA)

HSP 1 Score: 427 bits (1099), Expect = 5.140e-145
Identity = 225/407 (55.28%), Postives = 283/407 (69.53%), Query Frame = 2
Query:    8 MGLSKGVYLQYTAKYSVL---GGCD-GSDVKLAVLNVICPYTRRAVIQCFRKRGRAWGLTSDTSKAELQWGDYECLDWERIVSGKLRASSFCVRKGLSRKAWMSMYCNKYITKNPKSPLRHALPATVIVDTWEAFDDSLTFNFGGGDIASFGDDLGVRQSKGLSERIDWCLGEVEEKMKAMP--GPWILKPSTLNKGAAVVLVADVADLRSAVHSCTDIREWVLQEYIQRPKLIGGRKFHFRAYVLAVGCLSVYFFQRVLILRALRQYDE-DCRDPLAHITNTAVQAECQDFDESLAVMLL---------DEKVGQEKAKKGLQPVLTLASLVSSPDFQSLSFAFEQGEFSVFSPLPHCFEHFGLDFMVDESGQMWLLEANPGPDFRQTGASLGYIVDELMEESSLI 1180
            M L + + ++ T KYSV+   G  D G DV    L+V+CPYT   V + F +R + W +T+D+SKA+L WGDYECL+W+ IVSG++  SS+C RKGLSRKA +SMY NKY++K P SPL+ A+P T+IVD WEAFDD +TFN GG DIASFGDD GVRQ   LS+RIDW L  V + M A    G WILK STLNKGA V LV D  DLR  VH+  DIREWVLQEYI+RP L+ GRKFH RAYVLAVGCLSVY F RVL+L A   Y   D  DPLAHITNTA Q E   FDE+ +V LL         D  +    A+  +  ++T    +++  F++      +GEF+VF+PLPHCFEHFGLDFMVDE+  +WLLEANPGPDF+QTGA L  ++++LME+++ +
Sbjct:    1 MSLDERLVIEPTEKYSVISVQGSTDEGGDVSYVALDVLCPYTASLVHKAFARRRKRWRVTNDSSKAQLHWGDYECLNWDEIVSGRVCGSSYCTRKGLSRKAQLSMYTNKYLSKVPTSPLKKAMPRTIIVDIWEAFDDKMTFNLGG-DIASFGDDAGVRQCMSLSDRIDWALEAVRDAMAAAEARGGWILKASTLNKGAGVHLVTDFNDLRDVVHANHDIREWVLQEYIERPLLVHGRKFHLRAYVLAVGCLSVYLFDRVLLLSAHAPYAAGDFSDPLAHITNTARQCETAAFDEAASVGLLSDLATHLTRDGGMADGDAEAAVTGIVTAMRAITAELFRAF-----KGEFAVFAPLPHCFEHFGLDFMVDEALNVWLLEANPGPDFKQTGARLKPVIEQLMEDTARV 401          
BLAST of mRNA_C-australica_Contig_999.5.3 vs. uniprot
Match: D7G0H1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H1_ECTSI)

HSP 1 Score: 390 bits (1003), Expect = 6.010e-129
Identity = 213/430 (49.53%), Postives = 270/430 (62.79%), Query Frame = 2
Query:   65 GCDGSDVKLAVL--NVICPYTRRAVIQCFRKRGRAWGLTSDTSKAELQWGDYECLDWERIVSGKLRASSFCVRKGLSRKAWMSMYCNKYITKNPKSPLRHALPATVIVDTWEAFDDSLTFNFGGGDIASFGDDLGVRQSKGLSERIDWCLGEVEEKMK------------------------------------------AMPGPWILKPSTLNKGAAVVLVADVADLRSAVHSCTDIREWVLQEYIQRPKLIGGRKFHFRAYVLAVGCLSVYFFQRVLILRALRQY-------------DEDCRDPLAHITNTAVQAECQDFDESLAVMLLDEKVGQEKAKKGLQPVLTLASLVS-SPDFQSLS---FAFEQGEFSVFSPLPHCFEHFGLDFMVDESGQMWLLEANPGPDFRQTGASLGYIVDELMEES 1171
            GC G D ++ V+  +V+CPYTR  V++  ++R  AW +T DT++A L WGDYE +DWER+VSG+LRASS+CVRKGLSRKA +S YCNKY +K P +PL  A+P T+++DTWEAFDD +TFN GG DIA+FG DLGVRQS  L  R+DWCLG+ +E ++                                          A  G WILKPSTLNKGA + L  D   LR A+H   DIREWVLQEY++RP L  GRKFH RAY LAVGC+ VY +  VL+LRA ++Y             DED    LAHITNTA Q+E   F E   V +LD+ +G E  ++G  P    A +     D +SL+   F   +GEF+VFSPLP CFEHFGLDF+VDE   +WLLEANPGPDF+QTG+ L  ++  L+E S
Sbjct:   78 GCTGYDDEIGVICVDVVCPYTRALVMEGLKRRRGAWRVTKDTAEATLHWGDYEMIDWERVVSGELRASSYCVRKGLSRKAQLSRYCNKYASKRPGTPLETAMPRTLVIDTWEAFDDDMTFNLGG-DIAAFGSDLGVRQSVSLETRLDWCLGDAQEWIERDGKEEADEXXXXXXXXXXXXXXXXXEDVHRTGTTEGDEGKVATRGRWILKPSTLNKGAGLALGEDFETLRRAIHDSPDIREWVLQEYVERPLLAEGRKFHLRAYALAVGCIQVYVYDTVLLLRAAKRYPAAGSGGGGDAFGDEDA---LAHITNTARQSEDAAFREEDYVWVLDDLIG-ELERQGRSPEDARAKVDGIMADMRSLTTELFRAFRGEFAVFSPLPGCFEHFGLDFLVDEDFHVWLLEANPGPDFKQTGSRLKPVIGGLIEGS 502          
BLAST of mRNA_C-australica_Contig_999.5.3 vs. uniprot
Match: A0A329SV66_9STRA (ATP-grasp domain-containing protein n=16 Tax=Phytophthora TaxID=4783 RepID=A0A329SV66_9STRA)

HSP 1 Score: 294 bits (753), Expect = 6.290e-93
Identity = 174/383 (45.43%), Postives = 236/383 (61.62%), Query Frame = 2
Query:   47 KYSVLGG--CDG-SDVKLAVLNVICPYTRRAVIQCFRKRGRAWGLTS--DTSKAELQWGDYECLDWERIVSGKLRASSFCVRKGLSRKAWMSMYCNKYITKNPKSPLRHALPATVIVDTWEAFDDSLTFNFGGGDIASFGDDLGVRQSKGLSERIDWCLGEVEEKMKAMPGPWILKPSTLNKGAAVVLVADVADLRSAVHSCTDIREWVLQEYIQRPKLIGGRKFHFRAYVLAVGCLSVYFFQRVLILRALRQYDE-DCRDPLAHITNTAVQAECQDFDESLAVMLLDEKVGQEKAKKGLQPVLTLASLVSSPDFQSLSFAFE--QGEFSVFSPLPHCFEHFGLDFMVDESGQMWLLEANPGPDFRQTGASLGYIVDELMEES 1171
            KY +L G   DG  D  +A + V   Y    V + F      + + S  DT   +L W +YE LDW+ I++GK+ A+++CVRKGLSRKA +S+Y +KYI K+P   L  ALP T++VDTWEA+D+S+         A FG  +  RQ      R+D CL EV + ++     WI+KPS  NKGA V ++ +   LRS V+  TDIREWV+QEYIQRP L+ GRKFH R YVLAVG L VY +Q  L+L AL QY E D  +  +HITNT  Q    DF ES  V+LLD+ +    A++G+       + V +   Q  +  F+  +GEFSVF PLP+CFE +G+DFMVDE   +WLLE NPGPDF+QTG  L +++ +LM ++
Sbjct:   17 KYRLLAGEAADGYKDGLVARVGVPSEYVAPLVDRAFALHPAMYTVVSEDDTELPDLLWDEYENLDWKNILAGKVVANAYCVRKGLSRKAQLSIYLSKYIMKHPDCMLSKALPRTIVVDTWEAYDESM---------AQFG--IPFRQ------RLDSCLWEVRQTLENENKTWIMKPSATNKGAEVNVIKNFKKLRSIVNEWTDIREWVVQEYIQRPLLLRGRKFHIRVYVLAVGGLKVYVYQHCLVLCALEQYREADTDNNYSHITNTFQQQSHPDFVESECVLLLDD-IENILAEQGIADAAGKKAKVLADIGQITAETFDAYKGEFSVFQPLPNCFEIYGVDFMVDEDFNVWLLEFNPGPDFKQTGDRLHFVIRDLMADT 381          
BLAST of mRNA_C-australica_Contig_999.5.3 vs. uniprot
Match: A0A3F2S2G2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S2G2_9STRA)

HSP 1 Score: 293 bits (751), Expect = 1.370e-92
Identity = 170/376 (45.21%), Postives = 230/376 (61.17%), Query Frame = 2
Query:   89 LAVLNVICPYTRRAVIQCFRKRGRAWGLTSDTSKAE------LQWGDYECLDWERIVSGKLRASSFCVRKGLSRKAWMSMYCNKYITKNPKSPLRHALPATVIVDTWEAFDDSLTFNFGGGDIASFGDDLGVRQSKGLSERIDWCLGEVEEKMKAMPGPWILKPSTLNKGAAVVLVADVADLRSAVHSCTDIREWVLQEYIQRPKLIGGRKFHFRAYVLAVGCLSVYFFQRVLILRALRQYDE-DCRDPLAHITNTAVQAECQDFDESLAVMLLDEK--------VGQEKAKKGLQPVLTLASLVSSPDFQSLSFAFEQGEFSVFSPLPHCFEHFGLDFMVDESGQMWLLEANPGPDFRQTGASLGYIVDELMEES 1171
            +A + V   Y +  V + F      + + SD  K +      L W +YE LDW+ I+SGK+ A+++CVRKGLSRKA +S+Y +KYI K+P   L  A+P T++VDTWEA+DDS+         A FG  +  RQ      R+D CL EV + +++    WI+KPS  NKGA V +V D + LR  V+  TDIREWV+QEYIQRP L+ GRKFH R YVLAVG L VY +Q  L+L AL +Y E D  +  +HITNT  Q    DF ES  V+LLD+         +    AKK    +L    L+++  F +      +GEFSVF PLP+CFE +G+DFMVDE   +WLLE NPGPDF+QTG  L +++ +LME++
Sbjct:   30 VARVGVPSEYVKPLVDRAFALHPAMYTVVSDDDKEQEKTLPDLIWDEYENLDWKSILSGKVVANAYCVRKGLSRKAQLSIYLSKYIMKHPDCYLSKAMPRTLVVDTWEAYDDSM---------AQFG--ISFRQ------RLDSCLWEVRQVLESENKTWIMKPSATNKGAEVNVVKDFSKLRGIVNEWTDIREWVVQEYIQRPLLLRGRKFHIRVYVLAVGGLKVYVYQHCLVLCALEKYREADTDNNYSHITNTFQQQSHPDFVESECVLLLDDLEEILAEQGIADGAAKKA--KILADIGLITAETFDAY-----KGEFSVFQPLPNCFEIYGVDFMVDEDFNVWLLEFNPGPDFKQTGDRLHFVIRDLMEDT 381          
BLAST of mRNA_C-australica_Contig_999.5.3 vs. uniprot
Match: A0A0P1AGQ2_PLAHL (Tubulin tyrosine ligase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AGQ2_PLAHL)

HSP 1 Score: 292 bits (748), Expect = 3.540e-92
Identity = 161/366 (43.99%), Postives = 232/366 (63.39%), Query Frame = 2
Query:   89 LAVLNVICPYTRRAVIQCFRKRGRAWGLTSDTSKAELQ--WGDYECLDWERIVSGKLRASSFCVRKGLSRKAWMSMYCNKYITKNPKSPLRHALPATVIVDTWEAFDDSLTFNFGGGDIASFGDDLGVRQSKGLSERIDWCLGEVEEKMKAMPGPWILKPSTLNKGAAVVLVADVADLRSAVHSCTDIREWVLQEYIQRPKLIGGRKFHFRAYVLAVGCLSVYFFQRVLILRALRQYDE-DCRDPLAHITNTAVQAECQDFDESLAVMLLDEKVGQEKAKKGLQPVLTLASLVSSPDFQSLSFAFE--QGEFSVFSPLPHCFEHFGLDFMVDESGQMWLLEANPGPDFRQTGASLGYIVDELMEES 1171
            +A +NV   Y    V + F      + +  D +   L   W +YE LDW+ I++GK+ A+++C+RKG+SRKA +S+Y  KYI KNP   LR +LP T+++DTWEA+D+S+ F FG          +  RQ      R+D CL EV++ +++    WI+KPS  NKGA V L+ D   LRS V+  TDIREWV+QEYI+RP L+ GRKFH RAYVLAVG + VY +Q  L+L AL QY E D  +  +HITNT +Q    DF ES +V+LLD+ + +    +G+   + + + + +      +  F+  +GEFSVF PLP+CFE +G+DFMVDE   +WLLE NPGPDF+QTG  L +++ +L+ ++
Sbjct:   34 VARVNVPSAYVAPLVDRAFALHPAMYTIVQDETCETLSLIWDEYENLDWKNILAGKVVANAYCIRKGISRKAQLSIYLAKYIMKNPACMLRRSLPRTLVIDTWEAYDESM-FRFG----------ISFRQ------RLDSCLWEVKQALESESKTWIMKPSATNKGAEVNLIRDFQKLRSIVNEWTDIREWVVQEYIERPLLLRGRKFHIRAYVLAVGGIKVYVYQHCLVLCALEQYCEADIDNNFSHITNTWLQQSHPDFVESESVLLLDD-IEEILTDQGILDAVNMKTKILADIGLITAEMFDAYKGEFSVFQPLPNCFEIYGVDFMVDEKFNVWLLEINPGPDFKQTGDRLHFVIRDLLADT 381          
BLAST of mRNA_C-australica_Contig_999.5.3 vs. uniprot
Match: A0A662XWC7_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XWC7_9STRA)

HSP 1 Score: 292 bits (747), Expect = 6.170e-92
Identity = 163/340 (47.94%), Postives = 215/340 (63.24%), Query Frame = 2
Query:  179 DTSKAELQWGDYECLDWERIVSGKLRASSFCVRKGLSRKAWMSMYCNKYITKNPKSPLRHALPATVIVDTWEAFDDSLTFNFGGGDIASFGDDLGVRQSKGLSERIDWCLGEVEEKMKAMPGPWILKPSTLNKGAAVVLVADVADLRSAVHSCTDIREWVLQEYIQRPKLIGGRKFHFRAYVLAVGCLSVYFFQRVLILRALRQYDE-DCRDPLAHITNTAVQAECQDFDESLAVMLLDEK--------VGQEKAKKGLQPVLTLASLVSSPDFQSLSFAFEQGEFSVFSPLPHCFEHFGLDFMVDESGQMWLLEANPGPDFRQTGASLGYIVDELMEES 1171
            D +  +L W +YE LDW+ I+SGK+ A+++CVRKGLSRKA +S+Y +KYI K+P   L  ALP T++VDTWEA+DDS+         A FG  +  RQ      R+D CL EV + ++     WI+KPS  NKGA V +V     LR  V+  TDIREWV+QEYIQRP L+ GRKFH R YVLA+G L VY +Q  L+L AL QY E D  +  +HITNT  Q    DF ES  V+LLD+         +G   AKK    +L     +++  F +      +GEFSVF PLP+CFE +G+DFMVDE   +WLLE NPGPDF+QTG  L +++ +LME++
Sbjct:   70 DKTLPDLIWDEYENLDWKSILSGKVVANAYCVRKGLSRKAQLSIYLSKYIMKHPNCHLSKALPRTLVVDTWEAYDDSM---------AQFG--ISFRQ------RLDSCLWEVRQALETENKTWIMKPSATNKGAEVNVVTSFTKLRGIVNEWTDIREWVVQEYIQRPLLLRGRKFHIRVYVLALGGLKVYVYQHCLVLCALEQYREADTDNNYSHITNTFQQQSHPDFVESECVLLLDDLEEVLTEQGIGDAAAKKA--KILADIGHITAETFDAY-----KGEFSVFQPLPNCFEIYGVDFMVDEDFNVWLLEFNPGPDFKQTGERLHFVIRDLMEDT 385          
BLAST of mRNA_C-australica_Contig_999.5.3 vs. uniprot
Match: A0A3M6VV58_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VV58_9STRA)

HSP 1 Score: 290 bits (743), Expect = 1.940e-91
Identity = 166/369 (44.99%), Postives = 232/369 (62.87%), Query Frame = 2
Query:   89 LAVLNVICPYTRRAVIQCFRKRGRAWGLTSDTSKA-----ELQWGDYECLDWERIVSGKLRASSFCVRKGLSRKAWMSMYCNKYITKNPKSPLRHALPATVIVDTWEAFDDSLTFNFGGGDIASFGDDLGVRQSKGLSERIDWCLGEVEEKMKAMPGPWILKPSTLNKGAAVVLVADVADLRSAVHSCTDIREWVLQEYIQRPKLIGGRKFHFRAYVLAVGCLSVYFFQRVLILRALRQYD-EDCRDPLAHITNTAVQAECQDFDESLAVMLLDEKVGQEKAKKGLQPVLTLASLVSSPDFQSLSFAFE--QGEFSVFSPLPHCFEHFGLDFMVDESGQMWLLEANPGPDFRQTGASLGYIVDELMEES 1171
            +A +NV   Y    V + F      + + SD         +L W +YE LDW+ I++GKL A+++CVRKGLSRKA +S+Y +KY+ K+P+  L +ALP T++VDTWEA+D+S+         A FG  +  RQ      R+D CL EV++ +++    WI+KPS  NKGA V +V D   LRS V+  TDIREWV+QEYI+RP L+ GRKFH R YVLAVG L V+ +Q  L+L AL QY  ED  +  +HITNT  Q    +F ES  V+LLD+ +    A++G+       + +     +  + AF+  +GEFSVF PLP+CFE +G+DFMVDE   +WLLE NPGPDF+QTG  L +++ +LM +S
Sbjct:   30 IARVNVPSEYVSPLVDRAFALHPALYTVVSDDGIGYEELPDLIWDEYENLDWKNILAGKLVANAYCVRKGLSRKAQLSIYLSKYMLKHPECMLSNALPRTLVVDTWEAYDESM---------AHFG--ISFRQ------RLDSCLWEVKQTLESKKKTWIMKPSATNKGAEVNVVKDFEKLRSIVNEWTDIREWVVQEYIERPLLLRGRKFHIRVYVLAVGGLKVFVYQHCLVLCALEQYHPEDTDNNYSHITNTFQQQSHPNFVESECVLLLDD-IEDILAEQGILDAADKKAKILKDIGRITAEAFDAYKGEFSVFQPLPNCFEIYGVDFMVDEDFNVWLLEFNPGPDFKQTGDRLHFVIRDLMADS 380          
BLAST of mRNA_C-australica_Contig_999.5.3 vs. uniprot
Match: M4BXS8_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BXS8_HYAAE)

HSP 1 Score: 288 bits (737), Expect = 1.840e-90
Identity = 170/388 (43.81%), Postives = 237/388 (61.08%), Query Frame = 2
Query:   47 KYSVL--GGCDG-SDVKLAVLNVICPYTRRAVIQCFRKRGRAWGLTSDTSK-------AELQWGDYECLDWERIVSGKLRASSFCVRKGLSRKAWMSMYCNKYITKNPKSPLRHALPATVIVDTWEAFDDSLTFNFGGGDIASFGDDLGVRQSKGLSERIDWCLGEVEEKMKAMPGPWILKPSTLNKGAAVVLVADVADLRSAVHSCTDIREWVLQEYIQRPKLIGGRKFHFRAYVLAVGCLSVYFFQRVLILRALRQYDE-DCRDPLAHITNTAVQAECQDFDESLAVMLLDEKVGQEKAKKGLQPVLTLASLVSSPDFQSLSFAFE--QGEFSVFSPLPHCFEHFGLDFMVDESGQMWLLEANPGPDFRQTGASLGYIVDELMEES 1171
            KY VL  G  DG  D  +A + V   Y    V + F      + + +D           +L W +YE LDW  I++GK+ A+++CVRKGLSRKA +S+Y +KYI K+ K  L  A+P T+++DTWEA+DDS+         A FG  L  RQ      R+D CL EV+  ++     WI+KPS  NKGA V ++ D   LR+ V+  TDIREWV+QEY++RP L+ GRKFH RAYVLAVG L V+ +Q  L+L AL QY + D  +  +HITNT  Q    D+ ES  VMLLD+ + +  AK+G+       + + +   +  + AF+  +GEFSVF PLP+CFE +G+DFMVDE   +WLLE NPGPDF+QTG  L +++ +LM ++
Sbjct:   15 KYRVLASGTADGYKDQLVARVGVSSEYVAPLVDRAFALHPAMYTVITDEDDDDDQKELPDLIWDEYENLDWTNILAGKVVANAYCVRKGLSRKAQLSIYLSKYIKKHNKCMLSKAVPRTIVLDTWEAYDDSM---------AQFG--LSFRQ------RLDACLWEVKLILETETKTWIMKPSATNKGAEVNVIKDFQKLRTIVNEWTDIREWVVQEYMERPLLLRGRKFHIRAYVLAVGGLKVFVYQHCLVLSALEQYSKNDTDNNYSHITNTFQQQSHPDYVESECVMLLDD-IEEILAKQGVVDTAATKTKILADVGRITAEAFDAFKGEFSVFQPLPNCFEVYGVDFMVDEDFNVWLLEFNPGPDFKQTGDRLHFVIRDLMADT 384          
BLAST of mRNA_C-australica_Contig_999.5.3 vs. uniprot
Match: A0A484E7P0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7P0_BRELC)

HSP 1 Score: 283 bits (725), Expect = 1.850e-88
Identity = 153/332 (46.08%), Postives = 215/332 (64.76%), Query Frame = 2
Query:  197 LQWGDYECLDWERIVSGKLRASSFCVRKGLSRKAWMSMYCNKYITKNPKSPLRHALPATVIVDTWEAFDDSLTFNFGGGDIASFGDDLGVRQSKGLSERIDWCLGEVEEKMKAMPGPWILKPSTLNKGAAVVLVADVADLRSAVHSCTDIREWVLQEYIQRPKLIGGRKFHFRAYVLAVGCLSVYFFQRVLILRALRQYDE-DCRDPLAHITNTAVQAECQDFDESLAVMLLDE------KVGQEKAKKGLQPVLTLASLVSSPDFQSLSFAFEQGEFSVFSPLPHCFEHFGLDFMVDESGQMWLLEANPGPDFRQTGASLGYIVDELMEES 1171
            +QW +YE LDW+ I++GK+ A+++CVRKGLSRKA +S+Y +KYI K+P+S L  ALP T++V+TWEA+D+S++  FG     SF             +R++ CL EV++ ++     WI+KPS  NKGA V ++ D   L + V+  TDIREWV+QEYIQRP L+ GRKFH R YVLA+GCL VY +Q  L+L AL QY+E D  +  +HITNT  Q    +F ES  V+LLD+        G   A      +L     +++  F +      +GEFSVF PLP+CFE +G+DFMVD    +WLLE NPGPDF+QTG+ L ++V +L+ ++
Sbjct:   93 VQWDEYENLDWKNILAGKVVANAYCVRKGLSRKAQLSIYLSKYIVKHPESKLSKALPRTLVVETWEAYDESMS-QFG----ISF------------CQRLESCLWEVKQALEKDNKTWIMKPSATNKGAEVNVIKDYKSLLNFVNEWTDIREWVVQEYIQRPLLLRGRKFHIRVYVLALGCLKVYVYQHCLVLCALEQYNEADTHNNYSHITNTFQQQSHTNFVESDCVLLLDDIEIIMTDQGISDAAGKKSKILADIGHITAETFDAY-----KGEFSVFQPLPNCFEVYGVDFMVDADFNVWLLEINPGPDFKQTGSRLNFVVRDLIADT 402          
BLAST of mRNA_C-australica_Contig_999.5.3 vs. uniprot
Match: A0A067C925_SAPPC (ATP-grasp domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C925_SAPPC)

HSP 1 Score: 281 bits (718), Expect = 1.030e-87
Identity = 159/374 (42.51%), Postives = 221/374 (59.09%), Query Frame = 2
Query:   89 LAVLNVICPYTRRAVIQCFRKRGRAWG---LTSDTSKAELQWGDYECLDWERIVSGKLRASSFCVRKGLSRKAWMSMYCNKYITKNPKSPLRHALPATVIVDTWEAFDDSLTFNFGGGDIASFGDDLGVRQSKGLSERIDWCLGEVEEKM--KAMPGPWILKPSTLNKGAAVVLVADVADLRSAVHSCTDIREWVLQEYIQRPKLIGGRKFHFRAYVLAVGCLSVYFFQRVLILRALRQYDEDCRD-PLAHITNTAVQAECQDFDESLAVMLL---------DEKVGQEKAKKGLQPVLTLASLVSSPDFQSLSFAFEQGEFSVFSPLPHCFEHFGLDFMVDESGQMWLLEANPGPDFRQTGASLGYIVDELME 1165
            L  +NV C Y R  V+  F K  R W    L +D    +L W +YE LDW+ ++ G++ A+S+CVRKGLSRKA +SM+ +KYI K+P   L  ALP T++VD W+AFD+SL              +LGV        R++ CL EV++    KA  G WI+KPS  NKGA V +    A  ++ +   TDIREWV+Q Y+QRP L+  RKFH R YV+AVGCL V+ +Q VL+L +L  Y+    D  L+HITNT  Q +  +F E+  V+LL         D+ +   +AK     +L     ++   F +      +GEFSVF PLP+CFE +G+DF++DE  Q+WLLE NPGPDF+QTG  L  ++  L+E
Sbjct:   29 LVRVNVPCNYLRPLVLGAFAKHDRFWDVMTLPTDPRTPDLLWDEYENLDWKNVLQGQVVANSYCVRKGLSRKAQLSMFLSKYIRKHPSCRLSRALPETLVVDLWDAFDNSLA-------------ELGVS----FRNRLESCLWEVKQLFEDKAETGTWIMKPSASNKGAEVNVFDTYAKFKAIITEWTDIREWVVQAYVQRPLLLKKRKFHVRVYVVAVGCLQVFVYQNVLLLTSLDAYNPSNTDNKLSHITNTFQQQDHPNFVEADCVLLLEDMEAILMDDQGIAHAEAKAITTKMLADIGAITGEVFDAY-----RGEFSVFQPLPNCFEVYGVDFLIDEDYQVWLLEVNPGPDFKQTGNRLQPLIQTLVE 380          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_999.5.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZQ42_9STRA5.140e-14555.28Tubulin-tyrosine ligase family-domain-containing p... [more]
D7G0H1_ECTSI6.010e-12949.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A329SV66_9STRA6.290e-9345.43ATP-grasp domain-containing protein n=16 Tax=Phyto... [more]
A0A3F2S2G2_9STRA1.370e-9245.21Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A0P1AGQ2_PLAHL3.540e-9243.99Tubulin tyrosine ligase n=1 Tax=Plasmopara halsted... [more]
A0A662XWC7_9STRA6.170e-9247.94Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A3M6VV58_9STRA1.940e-9144.99Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
M4BXS8_HYAAE1.840e-9043.81Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A484E7P0_BRELC1.850e-8846.08Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A067C925_SAPPC1.030e-8742.51ATP-grasp domain-containing protein n=2 Tax=Saprol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_999contigC-australica_Contig_999:2938..4902 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G0H1
PFAMsTTL
Model size1180
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue9.16e-130
EggNOG OGsKOG2157@1|root,KOG2157@2759|Eukaryota
Descriptionprotein polyglycylation
Cds size1173
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_999.5.3prot_C-australica_Contig_999.5.3Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_999 2938..4895 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588866.5019243-CDS-C-australica_Contig_999:2937..30541682588866.5019243-CDS-C-australica_Contig_999:2937..3054Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 2938..3054 -
1682588866.5182295-CDS-C-australica_Contig_999:3174..32781682588866.5182295-CDS-C-australica_Contig_999:3174..3278Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 3175..3278 -
1682588866.5297642-CDS-C-australica_Contig_999:3455..35161682588866.5297642-CDS-C-australica_Contig_999:3455..3516Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 3456..3516 -
1682588866.541029-CDS-C-australica_Contig_999:3546..37131682588866.541029-CDS-C-australica_Contig_999:3546..3713Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 3547..3713 -
1682588866.5521123-CDS-C-australica_Contig_999:3859..40041682588866.5521123-CDS-C-australica_Contig_999:3859..4004Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 3860..4004 -
1682588866.5628028-CDS-C-australica_Contig_999:4158..42651682588866.5628028-CDS-C-australica_Contig_999:4158..4265Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 4159..4265 -
1682588866.5744507-CDS-C-australica_Contig_999:4363..47551682588866.5744507-CDS-C-australica_Contig_999:4363..4755Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 4364..4755 -
1682588866.5904226-CDS-C-australica_Contig_999:4815..48951682588866.5904226-CDS-C-australica_Contig_999:4815..4895Chrysoparadoxa australica CS_1217CDSC-australica_Contig_999 4816..4895 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588866.6061952-UTR-C-australica_Contig_999:4895..49021682588866.6061952-UTR-C-australica_Contig_999:4895..4902Chrysoparadoxa australica CS_1217UTRC-australica_Contig_999 4896..4902 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_999.5.3

>prot_C-australica_Contig_999.5.3 ID=prot_C-australica_Contig_999.5.3|Name=mRNA_C-australica_Contig_999.5.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=391bp
MGLSKGVYLQYTAKYSVLGGCDGSDVKLAVLNVICPYTRRAVIQCFRKRG
RAWGLTSDTSKAELQWGDYECLDWERIVSGKLRASSFCVRKGLSRKAWMS
MYCNKYITKNPKSPLRHALPATVIVDTWEAFDDSLTFNFGGGDIASFGDD
LGVRQSKGLSERIDWCLGEVEEKMKAMPGPWILKPSTLNKGAAVVLVADV
ADLRSAVHSCTDIREWVLQEYIQRPKLIGGRKFHFRAYVLAVGCLSVYFF
QRVLILRALRQYDEDCRDPLAHITNTAVQAECQDFDESLAVMLLDEKVGQ
EKAKKGLQPVLTLASLVSSPDFQSLSFAFEQGEFSVFSPLPHCFEHFGLD
FMVDESGQMWLLEANPGPDFRQTGASLGYIVDELMEESSLI
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mRNA from alignment at C-australica_Contig_999:2938..4902-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_999.5.3 ID=mRNA_C-australica_Contig_999.5.3|Name=mRNA_C-australica_Contig_999.5.3|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1965bp|location=Sequence derived from alignment at C-australica_Contig_999:2938..4902- (Chrysoparadoxa australica CS_1217)
GGCTGGCATGGGGCTCAGCAAGGGCGTGTACCTTCAGTATACAGCCAAGT ATAGTGTCCTTGGAGGGTGCGATGGGTCGGATGTGAAGTGAGTATATAAT CGAGAAAGTGTCCATCCACCCCCTCCCCTGACCTGCTTATCCCCCAGGCT CGCAGTTCTAAATGTGATATGCCCGTACACCCGAAGAGCTGTGATCCAGT GCTTTCGCAAAAGGGGAAGAGCGTGGGGGTTGACGTCTGACACAAGTAAG GCTGAATTACAGTGGGGGGATTACGAATGCTTGGACTGGGAGAGAATAGT GTCTGGAAAGCTGCGGGCCAGCAGCTTTTGCGTGAGGAAGGGCCTCTCCC GCAAAGCCTGGATGTCGATGTATTGCAACAAATACATCACCAAGAACCCC AAATCACCGCTGCGGCATGCACTGCCTGCTACGGTGATCGTAGACACCTG GGAGGCGTTTGATGATTCGTTGACTTTCAACTTTGGTGGGGGAGATATCG CCTCATTTGGGGACGACCTTGGTGTTAGACAAAGCAAAGGTTTGTTGAAT GCTTAGTGTCCTGATCCAAGTTTAAGTTTGCATTCATGCTGGCTAACACG CTTGTTCACACCCTCATGCATCTGTTCATTCACTTAGGTCTAAGCGAAAG AATAGACTGGTGCCTCGGGGAGGTGGAAGAGAAGATGAAGGCTATGCCAG GCCCTTGGATCCTCAAGCCTTCTACTCTCAACAAAGGCGCTGCGGTATGA AGAAAAGCGATGCCAAGTTCTGGTTAAGACAGACTTTGATTTAGTTAGTG AGCTTGGCCCAGTATGATGTCAGAGCGAAGCCAAGCATCCCGTGGGGGGT GATGGGCCACTATAAGGATCATACTCGTCAGCCCTGCCTCCCCTACAGGT AGTCTTGGTCGCAGATGTTGCTGACTTGAGATCAGCGGTACATAGCTGCA CTGACATTAGAGAATGGGTGCTTCAAGAGTACATTCAAAGGCCTAAGTTG ATTGGTGGGCGCAAGTTTCACTTCCGAGCATATGTTTTGGCAGGTATTAC AGCTGACCTTGGTTGTCTTAGAGCTTAAAGGCTAAGCAAGGCCCATCTGC TCTGGCTGAGCCAGCTTGCCAGTTATTCTGGTCAAACTATGGTCATCCAC CCCTAATGGAGCTACCCGCCTTCCTTGCTCTGTACATAGTGGGGTGCCTG TCTGTGTATTTCTTTCAGAGGGTGCTGATACTTCGTGCTCTGAGGCAGTA TGATGAGGACTGCAGGGACCCTCTGGCTCACATTACCAACACTGCAGTCC AAGCAGAGTGTCAAGACTTTGACGAAAGCCTTGCTGTCATGCTTTTGGAT GAAAAGGTAATCATTTAGGCTTTAAGGCAAGCCAAGGTTGGGCAGGAGAA AGCAAAGAAAGGGCTTCAACCCGTTCTAACACTTGCCTCTCTTGTTTGTC CTGCAGGTTCCAGAACTTGGTGGGTGCCTGCCTGAGGTGATGGCATCGAT GCATGAGCTCACTGCTGAATTGTTCAAGGCTTTTAAGGTACTGTTCTCTC GCTGCCTCTCCTTGCTCAACCCAATAAGTAATCTCTTGGTTTTTTAACTG CCTATAGTTCTGCCCACGTAAGAGCCTCACCTGACTTCCAATCCCTCTCT TTTGCATTTGAACAGGGGGAATTCAGTGTGTTTTCACCGTTGCCACACTG CTTTGAGCACTTTGGCCTAGATTTCATGGTTAAGCATACCCTGACCCATT ACCCTTCTGCTTCTCTCTGAGCCTGCCTGCCAATCAGCCCCAGATGGTAA GATGTATCATCAGACCTAATCATGACTCATTTTGCACCACCCCTTCAGGT GGATGAGTCTGGCCAAATGTGGCTTCTGGAGGCTAACCCGGGACCAGACT TTCGACAAACTGGGGCAAGCTTGGGCTACATAGTGGATGAGCTAATGGAG GAGTCCTCTCTCATT
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Coding sequence (CDS) from alignment at C-australica_Contig_999:2938..4902-

>mRNA_C-australica_Contig_999.5.3 ID=mRNA_C-australica_Contig_999.5.3|Name=mRNA_C-australica_Contig_999.5.3|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1173bp|location=Sequence derived from alignment at C-australica_Contig_999:2938..4902- (Chrysoparadoxa australica CS_1217)
ATGGGGCTCAGCAAGGGCGTGTACCTTCAGTATACAGCCAAGTATAGTGT
CCTTGGAGGGTGCGATGGGTCGGATGTGAAGCTCGCAGTTCTAAATGTGA
TATGCCCGTACACCCGAAGAGCTGTGATCCAGTGCTTTCGCAAAAGGGGA
AGAGCGTGGGGGTTGACGTCTGACACAAGTAAGGCTGAATTACAGTGGGG
GGATTACGAATGCTTGGACTGGGAGAGAATAGTGTCTGGAAAGCTGCGGG
CCAGCAGCTTTTGCGTGAGGAAGGGCCTCTCCCGCAAAGCCTGGATGTCG
ATGTATTGCAACAAATACATCACCAAGAACCCCAAATCACCGCTGCGGCA
TGCACTGCCTGCTACGGTGATCGTAGACACCTGGGAGGCGTTTGATGATT
CGTTGACTTTCAACTTTGGTGGGGGAGATATCGCCTCATTTGGGGACGAC
CTTGGTGTTAGACAAAGCAAAGGTCTAAGCGAAAGAATAGACTGGTGCCT
CGGGGAGGTGGAAGAGAAGATGAAGGCTATGCCAGGCCCTTGGATCCTCA
AGCCTTCTACTCTCAACAAAGGCGCTGCGGTAGTCTTGGTCGCAGATGTT
GCTGACTTGAGATCAGCGGTACATAGCTGCACTGACATTAGAGAATGGGT
GCTTCAAGAGTACATTCAAAGGCCTAAGTTGATTGGTGGGCGCAAGTTTC
ACTTCCGAGCATATGTTTTGGCAGTGGGGTGCCTGTCTGTGTATTTCTTT
CAGAGGGTGCTGATACTTCGTGCTCTGAGGCAGTATGATGAGGACTGCAG
GGACCCTCTGGCTCACATTACCAACACTGCAGTCCAAGCAGAGTGTCAAG
ACTTTGACGAAAGCCTTGCTGTCATGCTTTTGGATGAAAAGGTTGGGCAG
GAGAAAGCAAAGAAAGGGCTTCAACCCGTTCTAACACTTGCCTCTCTTGT
TTCCTCACCTGACTTCCAATCCCTCTCTTTTGCATTTGAACAGGGGGAAT
TCAGTGTGTTTTCACCGTTGCCACACTGCTTTGAGCACTTTGGCCTAGAT
TTCATGGTGGATGAGTCTGGCCAAATGTGGCTTCTGGAGGCTAACCCGGG
ACCAGACTTTCGACAAACTGGGGCAAGCTTGGGCTACATAGTGGATGAGC
TAATGGAGGAGTCCTCTCTCATT
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