prot_C-australica_Contig_996.7.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-australica_Contig_996.7.1
Unique Name	prot_C-australica_Contig_996.7.1
Type	polypeptide
Organism	Chrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length	473

Homology

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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: D7FVL9_ECTSI (Xel-1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL9_ECTSI)

HSP 1 Score: 189 bits (481), Expect = 2.580e-50
Identity = 103/172 (59.88%), Postives = 127/172 (73.84%), Query Frame = 0

Query:   82 QNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRAL-VLNGATLEGGRRSLLVKFAEQHQK 252
            +NNLI+NYLP  VT  +LR +F VHG L  VKVV +R+TGKSMGYGFV+F  +  AAAA  A++GM I  KRIKV SIARPSSKDIK SKLYVT+LP+ + Q+QV+ +F       +CR+LVD +T +SRCTAFVQFD R EAK AL  +NG  L G ++ LLVKFAE H +
Sbjct:  107 ENNLIINYLPSHVTEIELRNMFAVHGDLAHVKVVYDRSTGKSMGYGFVKFTTNEAAAAATLAINGMAIDRKRIKV-SIARPSSKDIKNSKLYVTNLPDHFSQDQVVEVFE------QCRTLVDPKTTISRCTAFVQFDTRREAKDALKFMNGHVLPGAKKGLLVKFAEDHHR 271

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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A7S3HB55_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HB55_9STRA)

HSP 1 Score: 164 bits (416), Expect = 3.380e-42
Identity = 88/170 (51.76%), Postives = 120/170 (70.59%), Query Frame = 0

Query:   84 NLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALVLNGATLEGGRRSLLVKFAE-QHQK 252
            NLIVNYLP D+    L+ +F   G +VS KVV++R T KS+GYGFV+F    DA  A++ ++G  I NK +KV S+ARP+S +I+  KLYVT+LP+ Y +  V+HLF  +G IIECR L DR +  ++  AFVQFD +++A  AL LNG  LEGG+R L+VK+AE QH+K
Sbjct:   37 NLIVNYLPHDIDDLALKGLFVEFGEIVSAKVVTDRNTKKSLGYGFVKFLCEDDAKLAIQRLNGFTIDNKCLKV-SVARPASLEIRNCKLYVTNLPKDYTEIDVIHLFQEFGDIIECRVLKDRNSRTNKGVAFVQFDNKTQANNALSLNGCQLEGGQRGLVVKYAEDQHKK 205

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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A7R9UBS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBS9_9STRA)

HSP 1 Score: 159 bits (402), Expect = 3.460e-41
Identity = 84/169 (49.70%), Postives = 118/169 (69.82%), Query Frame = 0

Query:   81 PQNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSK--DIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALVLNGATLEGGRRSLLVKFA 247
            PQNNLIVNYL  D+T   L R+F  HG + SVK+V +R TG S+ YGFV+F     AA ALEA++G+ IG KR+KV SIARP+S   +++ +KLYV+++P+ Y ++ V  LF+ +G I+ECR L D + G SRCTAFV    ++ A+ ALV++G  L+G  R ++VK A
Sbjct:   26 PQNNLIVNYLTHDITEDKLLRLFSAHGEVESVKIVRDRETGMSLCYGFVKFKKDDCAATALEALNGLDIGQKRLKV-SIARPASGVWNLRNNKLYVSYIPKTYTKDDVCRLFNRFGRILECRVLYDEK-GESRCTAFVHMSTKAAAEAALVMHGVQLQGATRGMVVKMA 192

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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A1S3D973_DIACI (sex-lethal homolog isoform X4 n=1 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3D973_DIACI)

HSP 1 Score: 150 bits (379), Expect = 4.270e-39
Identity = 81/185 (43.78%), Postives = 119/185 (64.32%), Query Frame = 0

Query:   84 NLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDAPVAE 265
            NLI+NYLP  +T  +L  +F   GP+ S +V+ +  TG S G+GFV +    DAA A++ ++G+Q+ NK++KV S ARPS  DIK + LYVT+LP    ++Q+ H+FSPYG I++   L D+ TG+ R  AFV++DK+ EA+ A+  LNG    G    ++VK AE+H  QKA    GW A  ++
Sbjct:   14 NLIINYLPQTMTEKELFSMFVTIGPVESCRVMKDNKTGYSYGFGFVNYSKEEDAAKAIQQLNGLQVQNKKLKV-SYARPSGDDIKETNLYVTNLPRTITEDQLEHMFSPYGRIVQKNILKDKITGMPRGVAFVRYDKKDEAQNAIDGLNGTIPMGTTDPIMVKIAEEHGKQKAAYYAGWQAGFSQ 197

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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A6J1S7V2_FRAOC (sex-lethal homolog isoform X1 n=3 Tax=Thripinae TaxID=153976 RepID=A0A6J1S7V2_FRAOC)

HSP 1 Score: 151 bits (382), Expect = 6.060e-39
Identity = 87/204 (42.65%), Postives = 124/204 (60.78%), Query Frame = 0

Query:   82 QNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDAPVAERDFLDRNAMMSREVGGG 282
            + NLIVNYLP ++T  +L  +F   GP+ S +V+ +  TG S G+GFV +  + DAA A+  ++G+Q+ NKR+KV S ARPS  DIK + LYVT+LP+   + Q+  LF  +G I++   L D+ TG+ R  AFV+FD+R EA  A+  +NG   EGG   L VK AE+H  QKA    GW A   +   +  + + SR  G G
Sbjct:   19 RTNLIVNYLPQNMTEKELYSMFVTIGPVESCRVMKDFKTGYSYGFGFVNYSKAEDAAHAISTLNGLQVQNKRLKV-SFARPSGDDIKETNLYVTNLPKNVSEAQLDGLFGKFGTIVQKNLLKDKITGMPRGVAFVRFDRREEAMEAIQHMNGVIPEGGTEPLCVKIAEEHGKQKAAYYAGWQAGYTQSRGMPVSVVGSRGRGRG 221

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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A1B6GYV4_9HEMI (Uncharacterized protein n=3 Tax=Proconiini TaxID=565685 RepID=A0A1B6GYV4_9HEMI)

HSP 1 Score: 149 bits (375), Expect = 9.660e-39
Identity = 83/186 (44.62%), Postives = 119/186 (63.98%), Query Frame = 0

Query:   83 NNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDAPVAE 265
            +NLIVNYLP ++T  +L  +F   GP+VS +V+ +  TG S G+GFV +    DA  A++ ++G +I NKRIKV S ARPS  DIK + LYVT+LP  Y ++ +  LF  +G I++   L+D+ TGL R  AFV+FD+R EA+ A+  L+G   +GG   L V+ AE+H  QKA    GW A + +
Sbjct:    6 SNLIVNYLPQNMTDRELYSMFVTIGPVVSCRVMKDFKTGYSYGFGFVNYSRPEDAERAIQQLNGQEIFNKRIKV-SYARPSGDDIKDTNLYVTNLPRNYTEQNLEMLFGQFGTIVQKNLLLDKLTGLPRGVAFVRFDRREEAQEAIRNLDGVVPDGGNERLSVRVAEEHGKQKAAYFAGWQAGIQQ 190

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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A1S3D7X3_DIACI (sex-lethal homolog isoform X1 n=2 Tax=Diaphorina citri TaxID=121845 RepID=A0A1S3D7X3_DIACI)

HSP 1 Score: 150 bits (379), Expect = 2.760e-38
Identity = 81/185 (43.78%), Postives = 119/185 (64.32%), Query Frame = 0

Query:   84 NLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDAPVAE 265
            NLI+NYLP  +T  +L  +F   GP+ S +V+ +  TG S G+GFV +    DAA A++ ++G+Q+ NK++KV S ARPS  DIK + LYVT+LP    ++Q+ H+FSPYG I++   L D+ TG+ R  AFV++DK+ EA+ A+  LNG    G    ++VK AE+H  QKA    GW A  ++
Sbjct:   14 NLIINYLPQTMTEKELFSMFVTIGPVESCRVMKDNKTGYSYGFGFVNYSKEEDAAKAIQQLNGLQVQNKKLKV-SYARPSGDDIKETNLYVTNLPRTITEDQLEHMFSPYGRIVQKNILKDKITGMPRGVAFVRYDKKDEAQNAIDGLNGTIPMGTTDPIMVKIAEEHGKQKAAYYAGWQAGFSQ 197

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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: UPI0018C1E71E (sex-lethal isoform X2 n=1 Tax=Bombyx mori TaxID=7091 RepID=UPI0018C1E71E)

HSP 1 Score: 149 bits (376), Expect = 1.060e-37
Identity = 85/185 (45.95%), Postives = 113/185 (61.08%), Query Frame = 0

Query:   80 TPQNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDA 261
            T + NLIVNYLP ++T  DL  +F   GP+ S +V+ +  TG S G+GFV F    DAA A++  +G Q+ NKR+KV S ARPS  DIK + LYVT+LP     +Q+  +F  YG I++   L D+ +G  R  AFV++DKR EA+ A+  LN    EGG   L VK AE+H  QKA    GW A
Sbjct:   60 TARTNLIVNYLPQNITEKDLYAMFVTIGPIESCRVMKDFKTGYSYGFGFVNFTREEDAARAIDTFNGYQLRNKRLKV-SYARPSGDDIKETNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIAALNNVIPEGGTEPLSVKVAEEHGKQKAAYYAGWSA 243

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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A0B6Y8U1_9EUPU (Uncharacterized protein n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6Y8U1_9EUPU)

HSP 1 Score: 149 bits (376), Expect = 1.380e-37
Identity = 87/211 (41.23%), Postives = 129/211 (61.14%), Query Frame = 0

Query:   84 NLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRAL-VLNGATLEGGRRSLLVKFAEQHQKAPGR------GGWDAPVAERDFLDR----NAMMSREVGGGV 283
            NLI+NYLP  +T  + R +F   GP+ S K+V +++TG S G+GFV F +++DA  A+E +SG+QI NKRIKV ++ARPS   IKG+ +YV ++P  + + ++  LF PYG II+ R LVD  TG+S+   FV +D R EA+ A+  L+G T EG    +++KFA+ + K  G        G+ AP   R+ ++R    N M     G G 
Sbjct:   12 NLIINYLPQTLTDEEFRSMFLSVGPVKSSKIVRDKSTGYSYGFGFVDFQHATDAHRAIETLSGLQIQNKRIKV-ALARPSGDQIKGANIYVRNIPVHWKEIELNRLFDPYGKIIQSRVLVDLSTGVSKRVGFVLYDTRDEAETAIKCLSGKTPEGCTEPIMIKFADDNSKKKGPVQYVPVPGFAAPGPMRNQMNRFQRFNPMAGNFSGQGA 221

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BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Match: A0A6P8ZJM4_THRPL (sex-lethal homolog isoform X2 n=3 Tax=Thripinae TaxID=153976 RepID=A0A6P8ZJM4_THRPL)

HSP 1 Score: 146 bits (369), Expect = 1.500e-37
Identity = 83/183 (45.36%), Postives = 117/183 (63.93%), Query Frame = 0

Query:   82 QNNLIVNYLPPDVTSSDLRRVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIGNKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECRSLVDRRTGLSRCTAFVQFDKRSEAKRALV-LNGATLEGGRRSLLVKFAEQH--QKAPGRGGWDA 261
            + NLIVNYLP ++T  +L  +F   GP+ S +V+ +  TG S G+GFV +  + DAA A+  ++G+Q+ NKR+KV S ARPS +DIK + LYVT+LP+   + Q+  LF  +G I++   L D+ TGL R  AFV+FD++ EA  A+  +NG   EGG   L VK AE+H  QKA    GW A
Sbjct:   19 RTNLIVNYLPQNMTEKELYSMFVTIGPVESCRVMKDFKTGYSYGFGFVNYSKAEDAAHAISTLNGLQVQNKRLKV-SFARPSGEDIKETNLYVTNLPKNVTEGQLEVLFGKFGTIVQKNLLKDKITGLPRGVAFVRFDRKEEAMDAIQQMNGVIPEGGTEPLQVKIAEEHGKQKAAYYAGWQA 200

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_996.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FVL9_ECTSI	2.580e-50	59.88	Xel-1 protein n=1 Tax=Ectocarpus siliculosus TaxID...	[more]
A0A7S3HB55_9STRA	3.380e-42	51.76	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
A0A7R9UBS9_9STRA	3.460e-41	49.70	Hypothetical protein (Fragment) n=1 Tax=Pinguiococ...	[more]
A0A1S3D973_DIACI	4.270e-39	43.78	sex-lethal homolog isoform X4 n=1 Tax=Diaphorina c...	[more]
A0A6J1S7V2_FRAOC	6.060e-39	42.65	sex-lethal homolog isoform X1 n=3 Tax=Thripinae Ta...	[more]
A0A1B6GYV4_9HEMI	9.660e-39	44.62	Uncharacterized protein n=3 Tax=Proconiini TaxID=5...	[more]
A0A1S3D7X3_DIACI	2.760e-38	43.78	sex-lethal homolog isoform X1 n=2 Tax=Diaphorina c...	[more]
UPI0018C1E71E	1.060e-37	45.95	sex-lethal isoform X2 n=1 Tax=Bombyx mori TaxID=70...	[more]
A0A0B6Y8U1_9EUPU	1.380e-37	41.23	Uncharacterized protein n=1 Tax=Arion vulgaris Tax...	[more]
A0A6P8ZJM4_THRPL	1.500e-37	45.36	sex-lethal homolog isoform X2 n=3 Tax=Thripinae Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002343	Paraneoplastic encephalomyelitis antigen	PRINTS	PR00961	HUDSXLRNA	coord: 175..190 score: 29.38 coord: 83..98 score: 56.67 coord: 157..174 score: 61.67 coord: 190..202 score: 56.15 coord: 230..247 score: 42.78
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 171..245 e-value: 1.3E-14 score: 64.5 coord: 84..157 e-value: 4.3E-24 score: 96.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 85..155 e-value: 6.4E-21 score: 74.0 coord: 172..237 e-value: 1.2E-14 score: 53.9
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 170..249 score: 15.32331
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 83..156 score: 17.284681
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 162..252 e-value: 2.2E-19 score: 71.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 60..161 e-value: 4.5E-24 score: 87.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 362..383
None	No IPR available	PANTHER	PTHR10352	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G	coord: 82..252
None	No IPR available	PANTHER	PTHR10352:SF25	FOUND IN NEURONS, ISOFORM A-RELATED	coord: 82..252
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 47..157
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 161..256

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-australica_Contig_996	contig	C-australica_Contig_996:14190..17220 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Chrysoparadoxa australica CS_1217 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-australica_Contig_996.7.1	mRNA_C-australica_Contig_996.7.1	Chrysoparadoxa australica CS_1217	mRNA	C-australica_Contig_996 13513..17503 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-australica_Contig_996.7.1 ID=prot_C-australica_Contig_996.7.1|Name=mRNA_C-australica_Contig_996.7.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=473bp
MLKLLDIEEDPMDHSHSSRHSQATLVEEYTPPEHSASRPPLEGASMMAPP
APQPPYAPVNVLAYVNDNSMYQQINPVRVTPQNNLIVNYLPPDVTSSDLR
RVFEVHGPLVSVKVVSERATGKSMGYGFVRFHNSSDAAAALEAMSGMQIG
NKRIKVVSIARPSSKDIKGSKLYVTHLPEFYGQEQVLHLFSPYGAIIECR
SLVDRRTGLSRCTAFVQFDKRSEAKRALVLNGATLEGGRRSLLVKFAEQH
QKAPGRGGWDAPVAERDFLDRNAMMSREVGGGVHRHLKQQHEDLSQLHAS
AFSGYTSYASNNSLRLSSYGSDSSGLDGASRYYGDSSRGSHSNGHVGLSI
GMQSTAGVPVDNAGYQTMLNRSSQQHRDGHGRVTGPACSNVVSPSGAGLP
MYPQYIPQQPEYDSSGPLGGCNIVFDNPVGRPATSATIKAPRSERDRLPS
HINHAGDNAELTLPDLAGLSLS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002343	Hud_Sxl_RNA
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf