mRNA_C-australica_Contig_9894.1.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_9894.1.1 vs. uniprot
Match: A0A222E309_9RHOB (Hemolysin C n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E309_9RHOB) HSP 1 Score: 450 bits (1158), Expect = 1.540e-157 Identity = 228/229 (99.56%), Postives = 228/229 (99.56%), Query Frame = 3
Query: 165 MGDSEDSSKAAQRALGSGQMNGSGSRPGFWQSIFGRMGGARAQGKDASPQATPSTARPVHGMINLRRMRVEDVAIPKADIVAVPNTISKDDLVSVFRDSGMTRLPVYDGTLDTPVGMAHLKDFALEHGFNGTGERFNLKRLLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQYWTREKSGCYLVQAKTPLTDFESE 851
MGDSEDSSKAAQRALGSGQMNGSGSRPGFWQSIFGRMGGARAQGKDASPQATPS ARPVHGMINLRRMRVEDVAIPKADIVAVPNTISKDDLVSVFRDSGMTRLPVYDGTLDTPVGMAHLKDFALEHGFNGTGERFNLKRLLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQYWTREKSGCYLVQAKTPLTDFESE
Sbjct: 1 MGDSEDSSKAAQRALGSGQMNGSGSRPGFWQSIFGRMGGARAQGKDASPQATPSMARPVHGMINLRRMRVEDVAIPKADIVAVPNTISKDDLVSVFRDSGMTRLPVYDGTLDTPVGMAHLKDFALEHGFNGTGERFNLKRLLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQYWTREKSGCYLVQAKTPLTDFESE 229
BLAST of mRNA_C-australica_Contig_9894.1.1 vs. uniprot
Match: UPI001C494CE4 (hemolysin family protein n=1 Tax=Roseobacteraceae TaxID=2854170 RepID=UPI001C494CE4) HSP 1 Score: 366 bits (940), Expect = 1.910e-124 Identity = 185/230 (80.43%), Postives = 203/230 (88.26%), Query Frame = 3
Query: 165 MGDSEDSSKAAQRALGSGQMNGSGSRPGFWQSIFGRMGGARAQGKDASPQATPSTA-RPVHGMINLRRMRVEDVAIPKADIVAVPNTISKDDLVSVFRDSGMTRLPVYDGTLDTPVGMAHLKDFALEHGFNGTGERFNLKRLLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQYWTREKSGCYLVQAKTPLTDFESE 851
MGDS+DSS AAQ A G+G MNG +PGFWQ + G GG + AS + P T RP+HGMINLRRMRVEDVA+PKADI+AVPNTI+KDDLVSVFR+SG+TRLPVY+GTLDTPVGMAHLKDFAL+HGFNGTG RFNLKR+LRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEI DEHDT+ED +WTREK+GCYLVQAKTPLTDFE E
Sbjct: 1 MGDSDDSSMAAQSAPGTGDMNGHEPQPGFWQRLLG-FGGNGEEDDSASASSAPRTPERPIHGMINLRRMRVEDVAVPKADIIAVPNTITKDDLVSVFRESGLTRLPVYEGTLDTPVGMAHLKDFALQHGFNGTGGRFNLKRMLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIADEHDTDEDMFWTREKTGCYLVQAKTPLTDFEGE 229
BLAST of mRNA_C-australica_Contig_9894.1.1 vs. uniprot
Match: A0A0B3SKX7_9RHOB (Conjugation transfer protein n=4 Tax=Mameliella TaxID=1434019 RepID=A0A0B3SKX7_9RHOB) HSP 1 Score: 366 bits (939), Expect = 2.800e-124 Identity = 185/229 (80.79%), Postives = 204/229 (89.08%), Query Frame = 3
Query: 165 MGDSEDSSKAAQRALGSGQMNGSGSRPGFWQSIFGRMGGARAQGKDASPQATPSTARPVHGMINLRRMRVEDVAIPKADIVAVPNTISKDDLVSVFRDSGMTRLPVYDGTLDTPVGMAHLKDFALEHGFNGTGERFNLKRLLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQYWTREKSGCYLVQAKTPLTDFESE 851
MGDS+DSSKAAQ A +G+MNG G R FWQ +FGR G + A+ A + RPVHGMINLRRMRVEDVAIPKA+I+AVPNTI+K+DLV+VFR+SGMTRLPVY+GTLDTPVGMAHLKDFAL+ GFNGTG RFNLKR+LRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDT+EDQYWTREK+GCYLVQAKTPL+DFE E
Sbjct: 1 MGDSDDSSKAAQSAPLTGKMNGHGPRRSFWQRLFGRGGEGSSLRGSAAESAPRAPDRPVHGMINLRRMRVEDVAIPKAEIIAVPNTITKEDLVTVFRESGMTRLPVYEGTLDTPVGMAHLKDFALQQGFNGTGGRFNLKRMLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTDEDQYWTREKTGCYLVQAKTPLSDFEGE 229
BLAST of mRNA_C-australica_Contig_9894.1.1 vs. uniprot
Match: A0A238KDM0_9RHOB (Hemolysin C n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238KDM0_9RHOB) HSP 1 Score: 357 bits (915), Expect = 8.150e-120 Identity = 176/233 (75.54%), Postives = 204/233 (87.55%), Query Frame = 3
Query: 153 WNGLMGDSEDSSKAAQRALGSGQMNGSGSRPGFWQSIFGRMGGARAQGKDASPQATPSTARPVHGMINLRRMRVEDVAIPKADIVAVPNTISKDDLVSVFRDSGMTRLPVYDGTLDTPVGMAHLKDFALEHGFNGTGERFNLKRLLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQYWTREKSGCYLVQAKTPLTDFESE 851
WNGLMGDSEDSSKAA A G+GQM G+ R G +++FG +GG+ G ++ + A+ VHGM+NLRRMRVEDVAIPKA+I+AVP+TI++DDLV +FR SGMTRLPV++GTLDTPVGMAHLKDFAL+HGF+ +G RFNLK++LRPLLFVPPSMPIGVLL KMQ+ERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDT+EDQYWTREKSGCYL Q+KTPL DFESE
Sbjct: 22 WNGLMGDSEDSSKAAHSAHGTGQMTGTKPRKGLLKTLFGWIGGSGQGGTTTPANSSAAPAKAVHGMMNLRRMRVEDVAIPKAEIIAVPSTITRDDLVKIFRQSGMTRLPVFEGTLDTPVGMAHLKDFALQHGFDSSGGRFNLKKMLRPLLFVPPSMPIGVLLQKMQSERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTDEDQYWTREKSGCYLAQSKTPLVDFESE 254
BLAST of mRNA_C-australica_Contig_9894.1.1 vs. uniprot
Match: A0A0P1GKF7_9RHOB (Hemolysin C n=1 Tax=Tropicibacter naphthalenivorans TaxID=441103 RepID=A0A0P1GKF7_9RHOB) HSP 1 Score: 335 bits (858), Expect = 4.120e-112 Identity = 169/229 (73.80%), Postives = 189/229 (82.53%), Query Frame = 3
Query: 165 MGDSEDSSKAAQRALGSGQMNGSGSRPGFWQSIFGRMGGARAQGKDASPQATPSTARPVHGMINLRRMRVEDVAIPKADIVAVPNTISKDDLVSVFRDSGMTRLPVYDGTLDTPVGMAHLKDFALEHGFNGTGERFNLKRLLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQYWTREKSGCYLVQAKTPLTDFESE 851
MGD++DSS AAQ A G NG G+ PGF++ +FG + +D A + RP HGM+NLRRMRVEDVAIPKADI+AVP TIS+DDLV VFR+SG+TRLPVYDGTLDTPVGMAHLKDFAL GFNG F+LK +LRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQ+WTRE++GCYL AKTPL +FE E
Sbjct: 1 MGDNDDSSNAAQSAQDMGTTNGHGAEPGFFRRLFGLKSNGDSPAQDHVTPAVGPSDRPTHGMMNLRRMRVEDVAIPKADIIAVPETISRDDLVKVFRESGLTRLPVYDGTLDTPVGMAHLKDFALSQGFNGAEGEFDLKGMLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQFWTRERTGCYLALAKTPLDEFEDE 229
BLAST of mRNA_C-australica_Contig_9894.1.1 vs. uniprot
Match: UPI000EF55A3B (hemolysin family protein n=1 Tax=Tropicibacter sp. LMIT003 TaxID=2267683 RepID=UPI000EF55A3B) HSP 1 Score: 332 bits (850), Expect = 6.090e-111 Identity = 169/229 (73.80%), Postives = 191/229 (83.41%), Query Frame = 3
Query: 165 MGDSEDSSKAAQRALGSGQMNGSGSRPGFWQSIFGRMGGARAQGKDASPQATPSTARPVHGMINLRRMRVEDVAIPKADIVAVPNTISKDDLVSVFRDSGMTRLPVYDGTLDTPVGMAHLKDFALEHGFNGTGERFNLKRLLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQYWTREKSGCYLVQAKTPLTDFESE 851
MGD++DSS AAQ A +G +NG + GF + + G GG AR HGMINLRRMRVEDVAIPKA+IVAVP TI+KDDLV+VFR+SG+TRLPV++GTLDTPVGMAHLKDFAL HGFNG G RFNLK++LRPLL+VPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEI DEHDT+ED+YWTRE++GCYLVQAKTPL DFE+E
Sbjct: 1 MGDNDDSSNAAQGARDTGPVNGQ--QGGFLRRVIGIFGGEDGHRAQNGVHVNGQAARQAHGMINLRRMRVEDVAIPKAEIVAVPVTITKDDLVNVFRESGLTRLPVFEGTLDTPVGMAHLKDFALSHGFNGHGNRFNLKKMLRPLLYVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIADEHDTDEDKYWTRERTGCYLVQAKTPLEDFEAE 227
BLAST of mRNA_C-australica_Contig_9894.1.1 vs. uniprot
Match: A0A8J7WD56_9RHOB (HlyC/CorC family transporter n=1 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J7WD56_9RHOB) HSP 1 Score: 325 bits (833), Expect = 5.170e-108 Identity = 172/234 (73.50%), Postives = 197/234 (84.19%), Query Frame = 3
Query: 165 MGDSEDSSKAAQRALGSGQ--MNGSGSRPGFWQSIFGRMGGARAQGKDASPQATPS---TARPVHGMINLRRMRVEDVAIPKADIVAVPNTISKDDLVSVFRDSGMTRLPVYDGTLDTPVGMAHLKDFALEHGFNGTGERFNLKRLLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQYWTREKSGCYLVQAKTPLTDFESE 851
MGD++ SS AAQ A +GQ +NG + G + IFGRM G GK A+ P+ TA P HGMINLRRMRVEDVAIPKADIV+VP TI+KDDL +VFR++G+TR+PVYDGTLDTPVG+AHLKDFAL HGFNG+ +RFNLK++LRPLLFVPPSMPIGVLL KMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDT+E Q+WTREK+GCYL QAKTPL +FE+E
Sbjct: 1 MGDNDGSSTAAQSARANGQTHLNGHVAAAGA-RGIFGRMLGWFGGGKPATVAGGPAPTATAAPSHGMINLRRMRVEDVAIPKADIVSVPLTITKDDLATVFRETGLTRVPVYDGTLDTPVGLAHLKDFALTHGFNGSTQRFNLKKMLRPLLFVPPSMPIGVLLQKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTDEGQFWTREKTGCYLAQAKTPLEEFEAE 233
BLAST of mRNA_C-australica_Contig_9894.1.1 vs. uniprot
Match: A0A2K8W9H3_9RHOB (Magnesium/cobalt efflux protein n=3 Tax=Sagittula TaxID=58842 RepID=A0A2K8W9H3_9RHOB) HSP 1 Score: 323 bits (827), Expect = 2.630e-107 Identity = 167/231 (72.29%), Postives = 187/231 (80.95%), Query Frame = 3
Query: 165 MGDSEDSSKAAQRALGS--GQMNGSGSRPGFWQSIFGRMGGARAQGKDASPQATPSTARPVHGMINLRRMRVEDVAIPKADIVAVPNTISKDDLVSVFRDSGMTRLPVYDGTLDTPVGMAHLKDFALEHGFNGTGERFNLKRLLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQYWTREKSGCYLVQAKTPLTDFESE 851
MGD++DSSKAA AL + +RPGF + +FGR + PVHGMINLRRMRVEDVAIPKADIVAVPNTI++DDLV VFR+SGMTR+PVY+GTLDTPVGMAHLKDFAL +GFNG G RFNLKR+LRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDT++DQ W +E+ GCYL AKTPL +FE+E
Sbjct: 1 MGDNDDSSKAAHGALRQFEDEEGQDAARPGFLRRLFGRTTETDMEDDFKGDDTVGPREAPVHGMINLRRMRVEDVAIPKADIVAVPNTITRDDLVKVFRESGMTRVPVYEGTLDTPVGMAHLKDFALAYGFNGAGARFNLKRMLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTDDDQSWVKERPGCYLALAKTPLEEFEAE 231
BLAST of mRNA_C-australica_Contig_9894.1.1 vs. uniprot
Match: A0A369TKN5_9RHOB (HlyC/CorC family transporter n=1 Tax=Thalassococcus profundi TaxID=2282382 RepID=A0A369TKN5_9RHOB) HSP 1 Score: 320 bits (819), Expect = 5.440e-106 Identity = 161/229 (70.31%), Postives = 190/229 (82.97%), Query Frame = 3
Query: 165 MGDSEDSSKAAQRALGSGQMNGSGSRPGFWQSIFGRMGGARAQGKDASPQATPSTARPVHGMINLRRMRVEDVAIPKADIVAVPNTISKDDLVSVFRDSGMTRLPVYDGTLDTPVGMAHLKDFALEHGFNGTGERFNLKRLLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQYWTREKSGCYLVQAKTPLTDFESE 851
MGD++ SS AA A + + + GF++ I GG+ + ++ Q++ R HGMINLRRMRVEDV+IP+ADI++VP+TISK+DLV +FR+SG+TRLPVY GTLDTPVGMAHLKDFAL HGFNG+G RF+LK++LRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDT+E +WTREKSGCYL QAKTPL DFE+E
Sbjct: 1 MGDTDGSSNAAHSAQKTEEHEDHPEQSGFFRRIAAAFGGSDTPEEASNGQSSAQAPRLTHGMINLRRMRVEDVSIPRADIISVPDTISKEDLVKIFRESGLTRLPVYSGTLDTPVGMAHLKDFALMHGFNGSGARFSLKKMLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTDEGTFWTREKSGCYLAQAKTPLEDFEAE 229
BLAST of mRNA_C-australica_Contig_9894.1.1 vs. uniprot
Match: UPI0010A52382 (hemolysin family protein n=1 Tax=Primorskyibacter sp. XY-301 TaxID=2562685 RepID=UPI0010A52382) HSP 1 Score: 319 bits (817), Expect = 5.610e-106 Identity = 169/232 (72.84%), Postives = 187/232 (80.60%), Query Frame = 3
Query: 165 MGDSEDSSKAAQRALGSGQMNGSGSRPGFWQSIFGRMGGARAQGKDASPQ---ATPSTARPVHGMINLRRMRVEDVAIPKADIVAVPNTISKDDLVSVFRDSGMTRLPVYDGTLDTPVGMAHLKDFALEHGFNGTGERFNLKRLLRPLLFVPPSMPIGVLLTKMQTERRHMALVIDEYGGVDGLVTIEDLIEQVIGEIEDEHDTEEDQYWTREKSGCYLVQAKTPLTDFESE 851
MGD++DSS AAQ A MNG PG + +F G +R + A PQ A P HGMINLRRMRVEDVAIPKA+IVAVP T SKDDLV VFRDSG+TR+PV+DGTLD PVGMAHLKDFAL HGFNGTG+RF+L+R+ RPLLFVPPSMPIGVLLTKMQTER HMALVIDEYGGVDGLVTIEDLIEQV+GEIEDEHDTEE WTRE+SGCYL AKTPLT+FE+E
Sbjct: 1 MGDTDDSSNAAQSAHDMETMNGK--SPGLIRRLF---GWSRGESDSAPPQNGTAAKLPDTPQHGMINLRRMRVEDVAIPKAEIVAVPATTSKDDLVQVFRDSGLTRIPVFDGTLDNPVGMAHLKDFALSHGFNGTGQRFDLQRMARPLLFVPPSMPIGVLLTKMQTERMHMALVIDEYGGVDGLVTIEDLIEQVVGEIEDEHDTEEVDLWTRERSGCYLALAKTPLTEFEAE 227 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9894.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9894.1.1 >prot_C-australica_Contig_9894.1.1 ID=prot_C-australica_Contig_9894.1.1|Name=mRNA_C-australica_Contig_9894.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=229bp MGDSEDSSKAAQRALGSGQMNGSGSRPGFWQSIFGRMGGARAQGKDASPQback to top mRNA from alignment at C-australica_Contig_9894:1..851- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_9894.1.1 ID=mRNA_C-australica_Contig_9894.1.1|Name=mRNA_C-australica_Contig_9894.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=851bp|location=Sequence derived from alignment at C-australica_Contig_9894:1..851- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_9894:1..851- >mRNA_C-australica_Contig_9894.1.1 ID=mRNA_C-australica_Contig_9894.1.1|Name=mRNA_C-australica_Contig_9894.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=687bp|location=Sequence derived from alignment at C-australica_Contig_9894:1..851- (Chrysoparadoxa australica CS_1217)back to top |