mRNA_C-australica_Contig_9889.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9889.1.1
Unique NamemRNA_C-australica_Contig_9889.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9889.1.1 vs. uniprot
Match: A0A2E2B7B8_9BACT (D-malate dehydrogenase (decarboxylating) n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A2E2B7B8_9BACT)

HSP 1 Score: 501 bits (1290), Expect = 3.000e-177
Identity = 236/281 (83.99%), Postives = 262/281 (93.24%), Query Frame = 1
Query:    1 VIPVGQSVMEAVGKKYDLDFQWDVFDWSCEYYKETGSMMPEDGIDQLKGYDAIYLGAVGFPGVPDHVSLWGLLIPIRRHFQQYISLRPAKLFEGIPSPLANRTAKDIDMVIVRENNEGEYSEIGGRIYEGTEWETVSQESIFTLRGVDRVLHYAFQLAEKRKKHVTSATKSNGIIHTMPFWDERFESVKKDYPNIKTDKYHIDILTANFVLHPDWYDVVVGSNLFGDILSDLGPAVAGTIGIAASGNINPEKDFPSMFEPVHGSAPDIAGWDIANPIGSRW 843
            VIPVGQ V+EAVGKKY++ F+WD+F+WSCE+YK+TG+MMP+DG+D +  +DAIYLGAVGFPGVPDH+SLWGLLIPIRR FQQYISLRP KLF+GI SPLANRTA+DIDMVIVRENNEGEYSEIGGRIY GT+ ETV+QES+FT RGVDRV+ YAF+LAEKRKKHVTSATKSNGI+HTMPFWDERF  +KK +P IKTD+YHIDILTANFVLHPDWYDVVVGSNLFGDILSDLGPAVAGTIGIAASGNINPEKDFPSMFEPVHGSAPDIAG  IANPIG+ W
Sbjct:   16 VIPVGQLVLEAVGKKYNISFEWDLFNWSCEHYKQTGTMMPDDGLDVIGHHDAIYLGAVGFPGVPDHISLWGLLIPIRRAFQQYISLRPVKLFDGITSPLANRTAEDIDMVIVRENNEGEYSEIGGRIYRGTDQETVTQESVFTRRGVDRVMKYAFELAEKRKKHVTSATKSNGIVHTMPFWDERFAEMKKLHPGIKTDQYHIDILTANFVLHPDWYDVVVGSNLFGDILSDLGPAVAGTIGIAASGNINPEKDFPSMFEPVHGSAPDIAGKGIANPIGTIW 296          
BLAST of mRNA_C-australica_Contig_9889.1.1 vs. uniprot
Match: A0A7C1ZRQ0_9BACE (D-malate dehydrogenase (decarboxylating) n=1 Tax=Bacteroides sp. TaxID=29523 RepID=A0A7C1ZRQ0_9BACE)

HSP 1 Score: 447 bits (1149), Expect = 1.070e-155
Identity = 206/282 (73.05%), Postives = 249/282 (88.30%), Query Frame = 1
Query:    1 VIPVGQSVMEAVGKKYDLDFQWDVFDWSCEYYKETGSMMPEDGIDQLKGYDAIYLGAVGFPGVPDHVSLWGLLIPIRRHFQQYISLRPAKLFEGIPSPLANRTAKDIDMVIVRENNEGEYSEIGGRIYEGTEWETVSQESIFTLRGVDRVLHYAFQLAEKR-KKHVTSATKSNGIIHTMPFWDERFESVKKDYPNIKTDKYHIDILTANFVLHPDWYDVVVGSNLFGDILSDLGPAVAGTIGIAASGNINPEKDFPSMFEPVHGSAPDIAGWDIANPIGSRW 843
            VIP G  V+E++  ++++ F+WD FDWSC++Y ++G MMP+DG+ QL   D+I+LGAVGFPGVPDH+SLWGLLIPIRR F QYI+LRP +LFEG+P PLA RTA+DI+++IVRENNEGEYSEIGGRI++GTE E VSQ+S+FT RGVDRV+ YAF+LA  R +KH+TSATKSNGI+HTMPFWDERF ++KK+YP+I+TD+YHIDILTA FVLHPDWYDVVVGSNLFGDILSDL PAVAGTIGIAAS NINPE+++PSMFEPVHGSAPDIAG  IANPI + W
Sbjct:   18 VIPEGIKVLESMSTRFNISFKWDEFDWSCQHYAKSGKMMPDDGLQQLANKDSIFLGAVGFPGVPDHISLWGLLIPIRRTFHQYINLRPVRLFEGVPCPLAGRTAEDINLMIVRENNEGEYSEIGGRIFQGTEDEMVSQQSVFTRRGVDRVMRYAFELAGTRPEKHLTSATKSNGIVHTMPFWDERFAAIKKEYPDIRTDQYHIDILTAYFVLHPDWYDVVVGSNLFGDILSDLAPAVAGTIGIAASANINPEREYPSMFEPVHGSAPDIAGKKIANPIATIW 299          
BLAST of mRNA_C-australica_Contig_9889.1.1 vs. uniprot
Match: UPI000E6AA3E0 (tartrate dehydrogenase n=1 Tax=Indioceanicola profundi TaxID=2220096 RepID=UPI000E6AA3E0)

HSP 1 Score: 439 bits (1130), Expect = 7.750e-153
Identity = 202/282 (71.63%), Postives = 242/282 (85.82%), Query Frame = 1
Query:    1 VIPVGQSVMEAVGKKYDLDFQWDVFDWSCEYYKETGSMMPEDGIDQLKGYDAIYLGAVGFPGVPDHVSLWGLLIPIRRHFQQYISLRPAKLFEGIPSPLANRTAKDIDMVIVRENNEGEYSEIGGRIYEGTEWETVSQESIFTLRGVDRVLHYAFQLAEKR-KKHVTSATKSNGIIHTMPFWDERFESVKKDYPNIKTDKYHIDILTANFVLHPDWYDVVVGSNLFGDILSDLGPAVAGTIGIAASGNINPEKDFPSMFEPVHGSAPDIAGWDIANPIGSRW 843
            V+P G  V+EA G+++ ++FQWD FDWSC +Y++ G MMP DG+D+++G+DAI+LGAVGFPGVPDHVSLWGLLIPIRR FQQY++LRP +L  G  +PLANRTA DID  +VRENNEGEYSE+GGR++ GTE E   QE+IF+ RGVDR+L YAF+LA+KR +KHVTSATKSNGI+HTMPFWDERF  +K+ YP++ T +YHIDIL A+FV HPDW+DVVVGSNLFGDILSDLGPAVAG+IGIA S NINPE+DFPSMFEPVHGSAPDIAG  IANPIG  W
Sbjct:   18 VVPEGIRVLEAAGRRFGIEFQWDNFDWSCAHYQKHGCMMPADGLDRIRGHDAIFLGAVGFPGVPDHVSLWGLLIPIRREFQQYVNLRPVRLLRGTTTPLANRTAADIDFYVVRENNEGEYSEVGGRMFRGTENEVAIQEAIFSRRGVDRILRYAFELAKKRPRKHVTSATKSNGIVHTMPFWDERFAKMKQHYPDVGTSQYHIDILCAHFVQHPDWFDVVVGSNLFGDILSDLGPAVAGSIGIAPSANINPERDFPSMFEPVHGSAPDIAGKGIANPIGQIW 299          
BLAST of mRNA_C-australica_Contig_9889.1.1 vs. uniprot
Match: A0A2S6TZG2_9PROT (D-malate dehydrogenase [decarboxylating] n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6TZG2_9PROT)

HSP 1 Score: 439 bits (1128), Expect = 1.460e-152
Identity = 206/282 (73.05%), Postives = 240/282 (85.11%), Query Frame = 1
Query:    1 VIPVGQSVMEAVGKKYDLDFQWDVFDWSCEYYKETGSMMPEDGIDQLKGYDAIYLGAVGFPGVPDHVSLWGLLIPIRRHFQQYISLRPAKLFEGIPSPLANRTAKDIDMVIVRENNEGEYSEIGGRIYEGTEWETVSQESIFTLRGVDRVLHYAFQLAEKR-KKHVTSATKSNGIIHTMPFWDERFESVKKDYPNIKTDKYHIDILTANFVLHPDWYDVVVGSNLFGDILSDLGPAVAGTIGIAASGNINPEKDFPSMFEPVHGSAPDIAGWDIANPIGSRW 843
            VI  G  V+E +GKK+++ F+W  FDWSCE +K TG MMPEDG+D++KG DA+YLGAVG+PGVPDH+SLWGLLIPIRR F QYI+LRP +LFEG+ SPLANR   DID ++VREN EGEYSEIGGR+Y GTE E   QESIFT +GVDRVL +AF+LA KR K+H+TSATKSNGII+TMPFWDER  S+ K YP+++ DKYHIDILTA+FV +PDW+DVVVGSNLFGDILSDLGPA+ GTIGIA SGNINPE+DFPSMFEPVHGSAPDIAG  IANPIG  W
Sbjct:   18 VILEGVRVLETIGKKFNIQFKWQEFDWSCETFKRTGRMMPEDGLDKIKGSDAVYLGAVGYPGVPDHISLWGLLIPIRREFHQYINLRPVRLFEGVVSPLANRKPGDIDFLVVRENVEGEYSEIGGRLYAGTENEMAIQESIFTRKGVDRVLRFAFELANKRPKRHLTSATKSNGIIYTMPFWDERLSSMAKSYPDVEWDKYHIDILTAHFVRNPDWFDVVVGSNLFGDILSDLGPAITGTIGIAPSGNINPERDFPSMFEPVHGSAPDIAGKKIANPIGQIW 299          
BLAST of mRNA_C-australica_Contig_9889.1.1 vs. uniprot
Match: UPI001ADB7F3A (tartrate dehydrogenase n=1 Tax=Aquabacter sp. L1I39 TaxID=2820278 RepID=UPI001ADB7F3A)

HSP 1 Score: 439 bits (1128), Expect = 1.560e-152
Identity = 204/282 (72.34%), Postives = 239/282 (84.75%), Query Frame = 1
Query:    1 VIPVGQSVMEAVGKKYDLDFQWDVFDWSCEYYKETGSMMPEDGIDQLKGYDAIYLGAVGFPGVPDHVSLWGLLIPIRRHFQQYISLRPAKLFEGIPSPLANRTAKDIDMVIVRENNEGEYSEIGGRIYEGTEWETVSQESIFTLRGVDRVLHYAFQLAEKR-KKHVTSATKSNGIIHTMPFWDERFESVKKDYPNIKTDKYHIDILTANFVLHPDWYDVVVGSNLFGDILSDLGPAVAGTIGIAASGNINPEKDFPSMFEPVHGSAPDIAGWDIANPIGSRW 843
            V+P G  V++AVG+++ L F WD FDWSCEYY   G MMPEDG+DQ+KG+DAIYLGAVGFPGVPDHVSLWGLLIPIRR F+QY++LRP +L  G+ SPLA RTA DID  +VRENNEGEYSE+GGR++ GT  E   QESIFT +G D +L YAF+LA  R KKHVTSATKSNGI+HTMPFWDERF ++K +YP+I+ D+YHIDIL A+FV++PD +DVVVGSNLFGDILSDLGPAVAG+IGIA +GNINPE+DFPSMFEPVHGSAPDIAG  IANPIG  W
Sbjct:   18 VVPEGIKVLDAVGRRFGLSFTWDQFDWSCEYYARHGRMMPEDGLDQIKGHDAIYLGAVGFPGVPDHVSLWGLLIPIRRQFRQYVALRPVRLLRGMTSPLAGRTAADIDFFVVRENNEGEYSEVGGRMFRGTAEEMAMQESIFTRKGTDAILRYAFELARTRPKKHVTSATKSNGIVHTMPFWDERFAAMKAEYPDIRADQYHIDILAAHFVMNPDRFDVVVGSNLFGDILSDLGPAVAGSIGIAPAGNINPERDFPSMFEPVHGSAPDIAGQGIANPIGQIW 299          
BLAST of mRNA_C-australica_Contig_9889.1.1 vs. uniprot
Match: UPI001A9212C6 (tartrate dehydrogenase n=1 Tax=unclassified Jiella TaxID=2643868 RepID=UPI001A9212C6)

HSP 1 Score: 437 bits (1125), Expect = 4.960e-152
Identity = 205/282 (72.70%), Postives = 241/282 (85.46%), Query Frame = 1
Query:    1 VIPVGQSVMEAVGKKYDLDFQWDVFDWSCEYYKETGSMMPEDGIDQLKGYDAIYLGAVGFPGVPDHVSLWGLLIPIRRHFQQYISLRPAKLFEGIPSPLANRTAKDIDMVIVRENNEGEYSEIGGRIYEGTEWETVSQESIFTLRGVDRVLHYAFQLAEKR-KKHVTSATKSNGIIHTMPFWDERFESVKKDYPNIKTDKYHIDILTANFVLHPDWYDVVVGSNLFGDILSDLGPAVAGTIGIAASGNINPEKDFPSMFEPVHGSAPDIAGWDIANPIGSRW 843
            V+P G  V+EAVG+K+D+ FQ+D  DWSCE YK+TG MMPEDG+++ K +DA++LGAVG+P VPDH+SLWGLLIPIRR F QY++LRP +L +G  SPLA R  +DID  +VREN EGEYSE GGR+Y GTE E   QE+IFT RGVDR+LHYAF+LA+ R KKH+TSATKSNGI+HTMPFWDERF++VK DYP+I+TD+YHIDILTA+FV HPDW+DVVVGSNLFGDILSDLGPAVAG+IGIA S NINPE DFPSMFEPVHGSAPDIAG  IANPIG  W
Sbjct:   21 VVPEGMRVLEAVGRKFDIAFQFDEVDWSCETYKKTGRMMPEDGLERFKRHDAVFLGAVGWPDVPDHISLWGLLIPIRRTFNQYVNLRPCRLLKGTTSPLAGRGPEDIDFYVVRENVEGEYSEAGGRLYHGTENEIAIQEAIFTRRGVDRILHYAFKLAQSRPKKHLTSATKSNGIVHTMPFWDERFKAVKADYPDIRTDQYHIDILTAHFVQHPDWFDVVVGSNLFGDILSDLGPAVAGSIGIAPSANINPEGDFPSMFEPVHGSAPDIAGQKIANPIGQIW 302          
BLAST of mRNA_C-australica_Contig_9889.1.1 vs. uniprot
Match: A0A537X0Y2_9PROT (D-malate dehydrogenase [decarboxylating] n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537X0Y2_9PROT)

HSP 1 Score: 437 bits (1124), Expect = 6.120e-152
Identity = 198/281 (70.46%), Postives = 234/281 (83.27%), Query Frame = 1
Query:    1 VIPVGQSVMEAVGKKYDLDFQWDVFDWSCEYYKETGSMMPEDGIDQLKGYDAIYLGAVGFPGVPDHVSLWGLLIPIRRHFQQYISLRPAKLFEGIPSPLANRTAKDIDMVIVRENNEGEYSEIGGRIYEGTEWETVSQESIFTLRGVDRVLHYAFQLAEKRKKHVTSATKSNGIIHTMPFWDERFESVKKDYPNIKTDKYHIDILTANFVLHPDWYDVVVGSNLFGDILSDLGPAVAGTIGIAASGNINPEKDFPSMFEPVHGSAPDIAGWDIANPIGSRW 843
            V+P G + +EA  ++Y    +W  FDWSCE Y +TG MMPEDG+DQL+ YDA++LGAVG+PGVPDHVSLWGLLIP+RRHFQQYI+LRP +L  G+ SPL  R   DID  +VRENNEGEYS +GGR+YEGT+ E   Q+++FT RG DRV+ YAF+LA  RKKHVTSATKSNGIIHTMP+WDERF +V KDYP++KTD+YHIDILTA+FV HPDW+DVVVGSNLFGDILSDLGPA  G+IGIA S NINPE+++PSMFEPVHGSAPDIAG  IANPIG  W
Sbjct:   19 VVPEGVNALEAAARRYGFALEWREFDWSCETYAKTGRMMPEDGLDQLRPYDAVFLGAVGYPGVPDHVSLWGLLIPLRRHFQQYINLRPVRLLAGVDSPLKGRAPGDIDFYVVRENNEGEYSSVGGRLYEGTDLEMAMQQAVFTRRGCDRVMRYAFELARTRKKHVTSATKSNGIIHTMPYWDERFAAVAKDYPDVKTDQYHIDILTAHFVRHPDWFDVVVGSNLFGDILSDLGPACVGSIGIAPSANINPEREYPSMFEPVHGSAPDIAGRGIANPIGQIW 299          
BLAST of mRNA_C-australica_Contig_9889.1.1 vs. uniprot
Match: A0A2V8H1R7_9BACT (D-malate dehydrogenase (decarboxylating) n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8H1R7_9BACT)

HSP 1 Score: 436 bits (1122), Expect = 1.110e-151
Identity = 201/281 (71.53%), Postives = 242/281 (86.12%), Query Frame = 1
Query:    1 VIPVGQSVMEAVGKKYDLDFQWDVFDWSCEYYKETGSMMPEDGIDQLKGYDAIYLGAVGFPGVPDHVSLWGLLIPIRRHFQQYISLRPAKLFEGIPSPLANRTAKDIDMVIVRENNEGEYSEIGGRIYEGTEWETVSQESIFTLRGVDRVLHYAFQLAEKRKKHVTSATKSNGIIHTMPFWDERFESVKKDYPNIKTDKYHIDILTANFVLHPDWYDVVVGSNLFGDILSDLGPAVAGTIGIAASGNINPEKDFPSMFEPVHGSAPDIAGWDIANPIGSRW 843
            V+P G  V+EA GKK+ L ++   FDWSCE Y +TG MMPEDG++QLK +DA++LGAVG+PGVPDHVSLWGLLIPIRR F QY++LRP KLF+G+ +PLA+R   +ID V++REN EGEYS IGGRI+ GT+ E  +QES+FT RGVDRV+ YAF+LA KRKKH+TSATKSNGIIHTMPFWDERF ++KKDY ++KTD++HIDILTA+FV +PDW+DVVVGSNLFGDILSDLGPAVAG IGIA S N+NPE+ FPSMFEPVHGSAPDIAG +IANPIG+ W
Sbjct:   18 VVPEGLRVLEAAGKKFGLSYEMTHFDWSCEVYAKTGRMMPEDGLEQLKKFDALFLGAVGYPGVPDHVSLWGLLIPIRRGFDQYVNLRPVKLFKGVKTPLADREPDEIDFVVIRENTEGEYSSIGGRIFSGTDNEFATQESVFTRRGVDRVMRYAFELARKRKKHLTSATKSNGIIHTMPFWDERFNALKKDYSDVKTDQFHIDILTAHFVRNPDWFDVVVGSNLFGDILSDLGPAVAGGIGIAPSANLNPERTFPSMFEPVHGSAPDIAGRNIANPIGTIW 298          
BLAST of mRNA_C-australica_Contig_9889.1.1 vs. uniprot
Match: UPI000DF3646A (tartrate dehydrogenase n=1 Tax=Candidatus Halocyntiibacter alkanivorans TaxID=2267619 RepID=UPI000DF3646A)

HSP 1 Score: 436 bits (1121), Expect = 2.010e-151
Identity = 204/282 (72.34%), Postives = 236/282 (83.69%), Query Frame = 1
Query:    1 VIPVGQSVMEAVGKKYDLDFQWDVFDWSCEYYKETGSMMPEDGIDQLKGYDAIYLGAVGFPGVPDHVSLWGLLIPIRRHFQQYISLRPAKLFEGIPSPLANRTAKDIDMVIVRENNEGEYSEIGGRIYEGTEWETVSQESIFTLRGVDRVLHYAFQLAEKR-KKHVTSATKSNGIIHTMPFWDERFESVKKDYPNIKTDKYHIDILTANFVLHPDWYDVVVGSNLFGDILSDLGPAVAGTIGIAASGNINPEKDFPSMFEPVHGSAPDIAGWDIANPIGSRW 843
            VIPVGQ V++A+ K++    +W  FDWSCE Y ETG MMP+DGI+Q+K +DAIYLGAVGFPGVPDHVSLWGLLIP+RR   QY ++RP +L  GI SPLA RTA+DID V+VREN EGEYSEIGGRIY GT+ E   QESIFT RGVDR++ YAFQLA+ R +KHVTSATKSNGIIHTMPFWDERF +  + YP +KTD+YHIDILTA+FV HPDW+DVVVGSNLFGDILSDLGPA+AG+IGIA S NINPE  FPSMFEPVHGSAPDIAG  +ANP+ + W
Sbjct:   18 VIPVGQQVVDAIAKRFKFQVEWQQFDWSCERYHETGKMMPDDGIEQMKAFDAIYLGAVGFPGVPDHVSLWGLLIPLRRELDQYANVRPVRLLRGITSPLAGRTAEDIDFVVVRENIEGEYSEIGGRIYAGTDQEAAIQESIFTRRGVDRIMEYAFQLAQGRARKHVTSATKSNGIIHTMPFWDERFAAAGERYPEVKTDQYHIDILTAHFVQHPDWFDVVVGSNLFGDILSDLGPAIAGSIGIAPSANINPEGRFPSMFEPVHGSAPDIAGKGVANPVAAVW 299          
BLAST of mRNA_C-australica_Contig_9889.1.1 vs. uniprot
Match: A0A2E8YFH8_9GAMM (D-malate dehydrogenase (decarboxylating) n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E8YFH8_9GAMM)

HSP 1 Score: 436 bits (1120), Expect = 2.400e-151
Identity = 206/282 (73.05%), Postives = 235/282 (83.33%), Query Frame = 1
Query:    1 VIPVGQSVMEAVGKKYDLDFQWDVFDWSCEYYKETGSMMPEDGIDQLKGYDAIYLGAVGFPGVPDHVSLWGLLIPIRRHFQQYISLRPAKLFEGIPSPLANRTAKDIDMVIVRENNEGEYSEIGGRIYEGTEWETVSQESIFTLRGVDRVLHYAFQLAEKRK-KHVTSATKSNGIIHTMPFWDERFESVKKDYPNIKTDKYHIDILTANFVLHPDWYDVVVGSNLFGDILSDLGPAVAGTIGIAASGNINPEKDFPSMFEPVHGSAPDIAGWDIANPIGSRW 843
            V+P G  V+EAVG +YD++F W  FDWSCE Y  TG MMP+DG+ QLK +DAI+LGAVGFPGVPDHVSLWGLLIPIRR  QQ+++LRP ++ +G+ SPL  R  +DID  +VRENNEGEYSEIGGR+Y  TE E V QES+FT RGVDR+L YAF+LA  R  KHVTSATKSNGIIHTMP+WDERFE++   YP+I TDKYHIDILTANFVLHPDW+DVVVGSNLFGDILSDLGPAVAGTIGIA S NI+P K +PSMFEPVHGSAPDIAG  IANPIG  W
Sbjct:   18 VVPEGVRVLEAVGSRYDIEFDWTHFDWSCETYARTGKMMPDDGLAQLKTHDAIFLGAVGFPGVPDHVSLWGLLIPIRREMQQFVNLRPVRILKGMTSPLVGRGPEDIDFYVVRENNEGEYSEIGGRLYADTENEVVVQESVFTRRGVDRILEYAFELAMTRSAKHVTSATKSNGIIHTMPYWDERFEAMSARYPDISTDKYHIDILTANFVLHPDWFDVVVGSNLFGDILSDLGPAVAGTIGIAPSANIDPSKTYPSMFEPVHGSAPDIAGKGIANPIGQIW 299          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9889.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E2B7B8_9BACT3.000e-17783.99D-malate dehydrogenase (decarboxylating) n=1 Tax=P... [more]
A0A7C1ZRQ0_9BACE1.070e-15573.05D-malate dehydrogenase (decarboxylating) n=1 Tax=B... [more]
UPI000E6AA3E07.750e-15371.63tartrate dehydrogenase n=1 Tax=Indioceanicola prof... [more]
A0A2S6TZG2_9PROT1.460e-15273.05D-malate dehydrogenase [decarboxylating] n=4 Tax=A... [more]
UPI001ADB7F3A1.560e-15272.34tartrate dehydrogenase n=1 Tax=Aquabacter sp. L1I3... [more]
UPI001A9212C64.960e-15272.70tartrate dehydrogenase n=1 Tax=unclassified Jiella... [more]
A0A537X0Y2_9PROT6.120e-15270.46D-malate dehydrogenase [decarboxylating] n=1 Tax=A... [more]
A0A2V8H1R7_9BACT1.110e-15171.53D-malate dehydrogenase (decarboxylating) n=1 Tax=A... [more]
UPI000DF3646A2.010e-15172.34tartrate dehydrogenase n=1 Tax=Candidatus Halocynt... [more]
A0A2E8YFH8_9GAMM2.400e-15173.05D-malate dehydrogenase (decarboxylating) n=1 Tax=T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9889contigC-australica_Contig_9889:5..847 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog570952.ATVH01000016_gene2434
PFAMsIso_dh
Model size843
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00084,RC00105,RC00594
KEGG koko:K07246
KEGG ReactionR00215,R01751,R02545,R06180
KEGG Pathwayko00630,ko00650,map00630,map00650
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.24e-150
EggNOG OGsCOG0473@1|root,COG0473@2|Bacteria,1MUH4@1224|Proteobacteria,2TSBB@28211|Alphaproteobacteria,2JR85@204441|Rhodospirillales
EC1.1.1.83,1.1.1.93,4.1.1.73
DescriptionIsocitrate/isopropylmalate dehydrogenase
Cds size819
COG categoryCE
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588854.9320362-CDS-C-australica_Contig_9889:4..8231682588854.9320362-CDS-C-australica_Contig_9889:4..823Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9889 5..823 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588854.9515188-UTR-C-australica_Contig_9889:823..8471682588854.9515188-UTR-C-australica_Contig_9889:823..847Chrysoparadoxa australica CS_1217UTRC-australica_Contig_9889 824..847 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9889.1.1prot_C-australica_Contig_9889.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9889 5..823 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9889.1.1

>prot_C-australica_Contig_9889.1.1 ID=prot_C-australica_Contig_9889.1.1|Name=mRNA_C-australica_Contig_9889.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=273bp
MEAVGKKYDLDFQWDVFDWSCEYYKETGSMMPEDGIDQLKGYDAIYLGAV
GFPGVPDHVSLWGLLIPIRRHFQQYISLRPAKLFEGIPSPLANRTAKDID
MVIVRENNEGEYSEIGGRIYEGTEWETVSQESIFTLRGVDRVLHYAFQLA
EKRKKHVTSATKSNGIIHTMPFWDERFESVKKDYPNIKTDKYHIDILTAN
FVLHPDWYDVVVGSNLFGDILSDLGPAVAGTIGIAASGNINPEKDFPSMF
EPVHGSAPDIAGWDIANPIGSRW
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mRNA from alignment at C-australica_Contig_9889:5..847-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9889.1.1 ID=mRNA_C-australica_Contig_9889.1.1|Name=mRNA_C-australica_Contig_9889.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=843bp|location=Sequence derived from alignment at C-australica_Contig_9889:5..847- (Chrysoparadoxa australica CS_1217)
GTGATTCCCGTAGGTCAATCCGTCATGGAGGCAGTGGGTAAAAAGTATGA CCTTGATTTTCAATGGGACGTCTTCGACTGGAGCTGTGAGTACTACAAAG AGACGGGAAGTATGATGCCTGAAGATGGCATTGATCAGCTTAAAGGTTAT GATGCGATCTACCTGGGTGCTGTTGGATTTCCGGGCGTTCCGGATCATGT TTCACTTTGGGGCCTGCTCATACCGATTCGTAGACATTTTCAGCAATATA TTTCCCTGAGGCCGGCAAAACTATTTGAAGGGATACCTTCTCCGTTAGCC AATCGAACAGCGAAGGACATCGACATGGTAATTGTCCGTGAGAATAATGA GGGAGAATATTCTGAGATCGGCGGAAGGATTTATGAAGGTACCGAATGGG AGACAGTTAGCCAGGAGAGCATTTTTACCCTCAGGGGAGTAGATCGGGTT TTACATTATGCCTTTCAATTGGCAGAGAAAAGGAAAAAACATGTTACTTC AGCTACCAAATCGAATGGTATCATACACACCATGCCTTTTTGGGACGAAA GATTCGAATCAGTCAAAAAAGACTATCCAAATATCAAGACAGATAAATAT CACATCGATATCCTCACTGCCAATTTTGTGCTGCATCCTGACTGGTATGA TGTAGTGGTTGGCTCCAATCTCTTCGGGGATATTCTATCTGATCTGGGAC CAGCAGTGGCTGGCACTATCGGGATTGCAGCCTCAGGGAATATCAATCCT GAAAAGGATTTTCCTTCTATGTTTGAACCTGTTCATGGTTCAGCACCTGA CATTGCGGGTTGGGATATCGCCAATCCAATAGGATCCCGTTGG
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Coding sequence (CDS) from alignment at C-australica_Contig_9889:5..847-

>mRNA_C-australica_Contig_9889.1.1 ID=mRNA_C-australica_Contig_9889.1.1|Name=mRNA_C-australica_Contig_9889.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=819bp|location=Sequence derived from alignment at C-australica_Contig_9889:5..847- (Chrysoparadoxa australica CS_1217)
ATGGAGGCAGTGGGTAAAAAGTATGACCTTGATTTTCAATGGGACGTCTT
CGACTGGAGCTGTGAGTACTACAAAGAGACGGGAAGTATGATGCCTGAAG
ATGGCATTGATCAGCTTAAAGGTTATGATGCGATCTACCTGGGTGCTGTT
GGATTTCCGGGCGTTCCGGATCATGTTTCACTTTGGGGCCTGCTCATACC
GATTCGTAGACATTTTCAGCAATATATTTCCCTGAGGCCGGCAAAACTAT
TTGAAGGGATACCTTCTCCGTTAGCCAATCGAACAGCGAAGGACATCGAC
ATGGTAATTGTCCGTGAGAATAATGAGGGAGAATATTCTGAGATCGGCGG
AAGGATTTATGAAGGTACCGAATGGGAGACAGTTAGCCAGGAGAGCATTT
TTACCCTCAGGGGAGTAGATCGGGTTTTACATTATGCCTTTCAATTGGCA
GAGAAAAGGAAAAAACATGTTACTTCAGCTACCAAATCGAATGGTATCAT
ACACACCATGCCTTTTTGGGACGAAAGATTCGAATCAGTCAAAAAAGACT
ATCCAAATATCAAGACAGATAAATATCACATCGATATCCTCACTGCCAAT
TTTGTGCTGCATCCTGACTGGTATGATGTAGTGGTTGGCTCCAATCTCTT
CGGGGATATTCTATCTGATCTGGGACCAGCAGTGGCTGGCACTATCGGGA
TTGCAGCCTCAGGGAATATCAATCCTGAAAAGGATTTTCCTTCTATGTTT
GAACCTGTTCATGGTTCAGCACCTGACATTGCGGGTTGGGATATCGCCAA
TCCAATAGGATCCCGTTGG
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