mRNA_C-australica_Contig_977.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_977.1.1
Unique NamemRNA_C-australica_Contig_977.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match: A0A836CA23_9STRA (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA23_9STRA)

HSP 1 Score: 357 bits (915), Expect = 5.760e-119
Identity = 183/282 (64.89%), Postives = 213/282 (75.53%), Query Frame = 1
Query:   94 LAIHAQNAGVGKMIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRL-----------VKQHVRDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNN----------------PEGEGEAWYELTKESLEMINLKPQSAEGLSLPKLLSQLPK 858
            L I++ + G  K++KP+RI+IVRHGESMGNLDE+ Y  +PDW IPLTKQG+ DAR  G+            +K+HV D P+F YTSPYLRTKQTLAGMVEAF +N I+GVREEPRLTEQQFGNFQN         ERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDF+N  IARDD+ V+IVTHGLTLRL+VMRWF+YSI +FE+T+NPPNGG VVMERR                  P+G  EAWYELT ESL++INLKPQ   G SL +LLS+LP+
Sbjct:   66 LGIYSADHGHRKLVKPERIIIVRHGESMGNLDESTYVHVPDWKIPLTKQGYRDARLAGQKXXXXXXXXXXKIKEHVGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIRDSKQERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFSNEQIARDDLNVVIVTHGLTLRLMVMRWFQYSIADFENTYNPPNGGHVVMERRGGECARLQRTSEAHRGKGPKGGSEAWYELTPESLDLINLKPQRQFG-SLWRLLSELPQ 346          
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match: A0A6H5JRP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRP2_9PHAE)

HSP 1 Score: 336 bits (862), Expect = 7.510e-112
Identity = 172/274 (62.77%), Postives = 202/274 (73.72%), Query Frame = 1
Query:   73 PHADQNSLAIHAQNAGVGKMIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEA-------------WYELTKESLEMINLKPQSAEGLSLPKLLSQLP 855
            PH+DQ SL + + + G  +++KP+RI+IVRHGES+GN DE+ Y  +PDW IPLTK+G  + +  G  +K+++ D P+F YTSPYLRTKQTLAGMVEAF +N I+GVREEPRLTEQQFGNFQN         ERARFGRFYYRFP+GESGLDVYNRATSFIATMFRDFAN  IARDD+ VIIVTHGLTLRLLVMRWF+YSI +FE T NP NG FVVMER+   + +                WYELT ES   IN K Q   G SL KLLS+LP
Sbjct:   19 PHSDQESLGLFSGD-GKRRVVKPERIIIVRHGESLGNRDESTYVHVPDWKIPLTKKGFGEGQKAGEKIKEYIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVMERKEKEDTDSRFFKDVSAERRDLRHWYELTPESRAHINFKEQQQFG-SLWKLLSELP 290          
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match: D7FZ54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ54_ECTSI)

HSP 1 Score: 318 bits (816), Expect = 1.660e-104
Identity = 153/236 (64.83%), Postives = 186/236 (78.81%), Query Frame = 1
Query:   73 PHADQNSLAIHAQNAGVGKMIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEAWYELTKE 780
            PH+DQ SL + + + G  +++KP+RI+IVRHGES+GN DE+ Y  +PDW IPLTK+G  + +  G  +K+++ D P+F YTSPYLRTKQTLAGMVEAF +N I+GVREEPRLTEQQFGNFQN         ERARFGRFYYRFP+GESGLDVYNRATSFIATMFRDFAN  IARDD+ VIIVTHGLTLRLLVMRWF+YSI +FE T NP NG FVVMER+   + +   + +++ E
Sbjct:   97 PHSDQESLGLFSGD-GKRRVVKPERIIIVRHGESLGNRDESTYVHVPDWKIPLTKKGFGEGQKAGEKIKEYIGDKPLFIYTSPYLRTKQTLAGMVEAFDTNYIVGVREEPRLTEQQFGNFQNLATIVNSKAERARFGRFYYRFPQGESGLDVYNRATSFIATMFRDFANESIARDDLNVIIVTHGLTLRLLVMRWFQYSIADFEETLNPENGSFVVMERKEKEDTDSRFFKDVSAE 331          
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match: A0A7S1XZK9_9STRA (Hypothetical protein n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZK9_9STRA)

HSP 1 Score: 295 bits (755), Expect = 4.870e-94
Identity = 151/269 (56.13%), Postives = 189/269 (70.26%), Query Frame = 1
Query:  130 MIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGPVFFYTSPYLRTKQTLAG----------------------------MVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEAWYELTKESLEMINLKPQSAEGLSLPKLLSQL 852
            +++P RI++VRHGES GN+D  AY   PDW IPLTK+G +DAR  G+ +K+ V D P++ YTSPYLRTKQTLAG                            MV A+ +NEI+GVREEPRLTEQQFGNFQN         +R RFGRFY+RFPEGESGLDVYNR TSFIAT+FRDF+N  IAR+D+ VIIVTHGLTLRL +MR+F Y+I +FE+++NP NG FVVM+R+  PEG+  +WYEL  E  E +NL PQ+  G SL K+L ++
Sbjct:   79 IVRPARIILVRHGESAGNVDPQAYVNTPDWKIPLTKKGWKDARLAGQQIKEIVGDSPIYIYTSPYLRTKQTLAGKGSPQPRSLPLSLAPLPLSSTRPPAPPGMVGAWDTNEIVGVREEPRLTEQQFGNFQNVTNVKESREQRTRFGRFYFRFPEGESGLDVYNRVTSFIATLFRDFSNKDIAREDLDVIIVTHGLTLRLFLMRFFHYTIHDFENSYNPNNGAFVVMQRQEGPEGQ--SWYELMPEGREALNLPPQNGVG-SLWKILQEM 344          
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match: A0A7S2SR22_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SR22_9STRA)

HSP 1 Score: 273 bits (699), Expect = 1.600e-87
Identity = 131/246 (53.25%), Postives = 175/246 (71.14%), Query Frame = 1
Query:  130 MIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARD-----DITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEAWYELTKESLEMINLKPQSAEGLSLPKLLSQL 852
            +++P+RI +VRHGES+GN+    Y  +PDW I LT++G E A+ TG  +   + + PVFFYTSPY RTK+TL  MV  F  ++I+GVREEPRLTEQQFGNFQN         ER+ +GRFYYRFP+GESG DVY R ++F+  ++RD AN  +  +     D+ V+IV+HGLTLRLL+MRWF+Y+I +FE + NPPN  FVVMERR +    G  WYELT+ESL+++N  P   +G SL KL+S+L
Sbjct:   38 LVRPKRIFVVRHGESLGNISPEVYINVPDWRISLTEEGKEQAKATGSKISHIIGEDPVFFYTSPYRRTKETLQSMVTEFEQSDIVGVREEPRLTEQQFGNFQNLDEIQICKVERSSYGRFYYRFPQGESGFDVYTRVSTFLPDLYRDAANAELFGEGQTARDLNVVIVSHGLTLRLLLMRWFQYTISDFEQSHNPPNAAFVVMERREDQAHTGREWYELTEESLKLLNYSPPEHKG-SLWKLMSEL 282          
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match: A0A4D9D0Z6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0Z6_9STRA)

HSP 1 Score: 273 bits (699), Expect = 2.850e-85
Identity = 134/231 (58.01%), Postives = 164/231 (71.00%), Query Frame = 1
Query:  127 KMIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEG--EGEAWYELTKESLEMINLKPQS 813
            ++ KP RI++VRHGES GN+DE  Y   PDW +PL+  GHE AR TGR +K  V D P++ YTSPY RTKQTL+ ++E+F  N  +GVREEPR+TEQQFGNFQ          ER  FGRFY+RFP GESGLDVY R TSFI+TMFRDFA+  I R D+ ++IVTHGLTLRLL+MRWF+ ++  FEST NPPNG FVVM R+  P G   G   YE+  ES  +I+L   S
Sbjct:  171 QITKPHRIILVRHGESTGNVDERVYVETPDWKVPLSPIGHEQARQTGRQLKALVGDEPLYIYTSPYRRTKQTLSNILESFEDNLKVGVREEPRITEQQFGNFQCQQLMQQAKKERCNFGRFYFRFPNGESGLDVYTRVTSFISTMFRDFADGHICRPDLNIVIVTHGLTLRLLLMRWFKLTVDTFESTTNPPNGSFVVMTRKEGPRGGRSGGGVYEMAPESAALISLSCDS 401          
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match: A0A7S3XT41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT41_HETAK)

HSP 1 Score: 245 bits (625), Expect = 2.220e-77
Identity = 123/192 (64.06%), Postives = 147/192 (76.56%), Query Frame = 1
Query:  292 DGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEAWYELTKESLEMINLKPQSAEGLSLPKLLSQLPKVSK 867
            D P+ FY SPY RTKQTLAGM+ A  +N+IIG REEPRLTEQQFGNFQN         ERARFGRFYYRFP+GESGLDVYNR+TSFIATM RD ANP +AR  +  +IVTHGLTLRL +MRWF+YS+ +FE + NPPNGG V+ME+ ++P+G  E WYELT +SLE++  K Q   G SL KLL  LP+V +
Sbjct:    1 DAPLLFYCSPYRRTKQTLAGMMGALETNDIIGAREEPRLTEQQFGNFQNVLTTRQSKDERARFGRFYYRFPQGESGLDVYNRSTSFIATMHRDMANPALARPGLHSVIVTHGLTLRLFLMRWFQYSVEDFEESHNPPNGGVVIMEKVSDPQGRHE-WYELTDDSLELLKFKRQHRYG-SLWKLLDGLPQVDE 190          
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match: A0A7S0SR39_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SR39_9STRA)

HSP 1 Score: 242 bits (617), Expect = 9.950e-75
Identity = 115/207 (55.56%), Postives = 153/207 (73.91%), Query Frame = 1
Query:  121 VGKMIKPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHV-RDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIAR---DDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMER 729
            + K+  P+RI++VRHGES+GN+DE AY ++PDW IPLT++G E A N G+ +K+ +  + P+  Y SPY+RTKQT A M++  ++N +I VREEPRLTEQQFGNFQ          ER +FGRFYYRFP+GESGLDVY+R +SFI T+FR++A     R   +D  +IIVTHGLTLRL +MRWF++S+ EFE+T NP NG  +VM R
Sbjct:   39 MNKLRLPKRIILVRHGESLGNVDELAYCSMPDWKIPLTEKGKEQASNVGKKIKEIIGNNSPISVYLSPYIRTKQTFALMIKELSNNNVITVREEPRLTEQQFGNFQKAEDMIRYKKERGQFGRFYYRFPDGESGLDVYSRVSSFIGTLFREWAKEQSTRSNHEDNNIIIVTHGLTLRLFLMRWFQFSVSEFENTRNPNNGDIIVMNR 245          
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match: A0A8J5XQ82_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XQ82_DIALT)

HSP 1 Score: 231 bits (590), Expect = 4.030e-71
Identity = 112/227 (49.34%), Postives = 154/227 (67.84%), Query Frame = 1
Query:  136 KPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVR--DGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRD---FANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEAWYELTKESLEMINL 801
            +P+RIV+VRHGES+GNLDE  Y T PDW+IPLT++G E+A   GR + + +   D  VFFY SPYLR + TL  MV      +++GVREEPR++EQQFGN Q+         +R  FGRFYYRFP+GES LDVY+R +SFIAT++RD     +  +  ++  +++V HGL+ R  +MRWF+  + +FE   N PNG  +VMER+ N    GE WYEL++ES  ++NL
Sbjct:   30 RPRRIVLVRHGESLGNLDEAVYTTTPDWMIPLTQRGIEEAMAAGRALNKLLAHPDANVFFYHSPYLRARMTLDEMVAQLDPQKVVGVREEPRISEQQFGNLQSVALMQEAKSDRNAFGRFYYRFPDGESALDVYSRVSSFIATVYRDVDSMRSQRVLTEETHIVMVAHGLSARTFIMRWFQLPVADFEKLANQPNGSLLVMERQQN--AAGEQWYELSQESWNLLNL 254          
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Match: A0A7S3QIR9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QIR9_9STRA)

HSP 1 Score: 228 bits (580), Expect = 2.600e-69
Identity = 109/225 (48.44%), Postives = 154/225 (68.44%), Query Frame = 1
Query:  136 KPQRIVIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGPVFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNXXXXXXXXXERARFGRFYYRFPEGESGLDVYNRATSFIATMFRD---FANPLIARDDITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGEGEAWYELTKESLEMINL 801
            +P RI+++RHGES+GN+D++AY   PDW +PLT++G + + + G+ +   V DG VFFY SPY RT+ T+  +++    ++II  REEPR++EQQFGNFQN         ER  FGRFYYRF  GE+GLDVY+R +SFI+T+ RD   +       D + V+IVTHGL+LRL +MRWF++ + EFE+T NP N   VVM++R  P G    WYEL +++ E +NL
Sbjct:   61 RPTRIILIRHGESLGNVDDSAYVATPDWKVPLTERGRQQSFDAGKELADIVGDGQVFFYYSPYKRTRATVDELLKHINKSQIISTREEPRISEQQFGNFQNVEQVWESKKERHEFGRFYYRFKSGEAGLDVYSRVSSFISTLVRDCQQYQKAGYELDTVNVVIVTHGLSLRLFLMRWFQFGVEEFEATKNPDNAALVVMKKRCPPGGH--RWYELDEKNREELNL 283          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_977.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CA23_9STRA5.760e-11964.89NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
A0A6H5JRP2_9PHAE7.510e-11262.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ54_ECTSI1.660e-10464.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1XZK9_9STRA4.870e-9456.13Hypothetical protein n=4 Tax=Phaeomonas parva TaxI... [more]
A0A7S2SR22_9STRA1.600e-8753.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D0Z6_9STRA2.850e-8558.01Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S3XT41_HETAK2.220e-7764.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0SR39_9STRA9.950e-7555.56Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A8J5XQ82_DIALT4.030e-7149.34Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S3QIR9_9STRA2.600e-6948.44Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_977contigC-australica_Contig_977:637..2287 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FZ54
PFAMsHis_Phos_1
Model size1009
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0003993,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006793,GO:0006796,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0009987,GO:0010876,GO:0015850,GO:0015918,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0032365,GO:0032366,GO:0033036,GO:0042578,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0071702
Exons7
Evalue2.72e-105
EggNOG OGs2CMFW@1|root,2QQ8J@2759|Eukaryota
Ec32 ortholog descriptionHistidine phosphatase superfamily
Ec32 orthologEc-02_006330.1
DescriptionHistidine phosphatase superfamily (branch 1)
Cds size1008
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_977.1.1prot_C-australica_Contig_977.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_977 637..2287 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588842.9881237-CDS-C-australica_Contig_977:636..7651682588842.9881237-CDS-C-australica_Contig_977:636..765Chrysoparadoxa australica CS_1217CDSC-australica_Contig_977 637..765 +
1682588842.9976842-CDS-C-australica_Contig_977:825..8911682588842.9976842-CDS-C-australica_Contig_977:825..891Chrysoparadoxa australica CS_1217CDSC-australica_Contig_977 826..891 +
1682588843.0121243-CDS-C-australica_Contig_977:969..11221682588843.0121243-CDS-C-australica_Contig_977:969..1122Chrysoparadoxa australica CS_1217CDSC-australica_Contig_977 970..1122 +
1682588843.0276892-CDS-C-australica_Contig_977:1253..14021682588843.0276892-CDS-C-australica_Contig_977:1253..1402Chrysoparadoxa australica CS_1217CDSC-australica_Contig_977 1254..1402 +
1682588843.0437324-CDS-C-australica_Contig_977:1489..16341682588843.0437324-CDS-C-australica_Contig_977:1489..1634Chrysoparadoxa australica CS_1217CDSC-australica_Contig_977 1490..1634 +
1682588843.0553045-CDS-C-australica_Contig_977:1789..18851682588843.0553045-CDS-C-australica_Contig_977:1789..1885Chrysoparadoxa australica CS_1217CDSC-australica_Contig_977 1790..1885 +
1682588843.063094-CDS-C-australica_Contig_977:2017..22871682588843.063094-CDS-C-australica_Contig_977:2017..2287Chrysoparadoxa australica CS_1217CDSC-australica_Contig_977 2018..2287 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_977.1.1

>prot_C-australica_Contig_977.1.1 ID=prot_C-australica_Contig_977.1.1|Name=mRNA_C-australica_Contig_977.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=336bp
SLAELRPRKGTRCYYASTRRMNYSPHADQNSLAIHAQNAGVGKMIKPQRI
VIVRHGESMGNLDETAYGTIPDWLIPLTKQGHEDARNTGRLVKQHVRDGP
VFFYTSPYLRTKQTLAGMVEAFTSNEIIGVREEPRLTEQQFGNFQNLQTI
QSSKAERARFGRFYYRFPEGESGLDVYNRATSFIATMFRDFANPLIARDD
ITVIIVTHGLTLRLLVMRWFRYSILEFESTFNPPNGGFVVMERRNNPEGE
GEAWYELTKESLEMINLKPQSAEGLSLPKLLSQLPKVSKASLHYHLLHFS
HFLFLLLQGGRGSPASDLHSSSIGWGTRRSAVMPR*
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mRNA from alignment at C-australica_Contig_977:637..2287+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_977.1.1 ID=mRNA_C-australica_Contig_977.1.1|Name=mRNA_C-australica_Contig_977.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1651bp|location=Sequence derived from alignment at C-australica_Contig_977:637..2287+ (Chrysoparadoxa australica CS_1217)
TCCTTGGCAGAATTAAGGCCGCGGAAAGGTACAAGATGCTACTATGCCTC AACGCGGCGAATGAATTACAGTCCCCATGCGGACCAGAACAGCTTAGCGA TACATGCTCAGAATGCTGGGGTTGGCAAGGTTGTCTTGAAAGTTAAGCTT GTACCTAAGTAGTTATAATTCTAATTGTCTTGCCGGTAGATGATCAAGCC GCAACGCATTGTCATTGTGAGGCATGGTGAGAGTATGGGCAACCTAGATG AAACGGTGAGCAACACAAGACACAGTTGCAATTGAAGTGCCACCCTAGTT GCTCCACTCAAGAATTTATTGCCCTCTGCTCAGGCTTATGGAACCATCCC AGACTGGCTCATCCCTTTAACCAAGCAAGGCCACGAGGATGCCAGGAACA CTGGTCGACTGGTCAAGCAGCACGTCCGTGATGGACCTGTCTTTTTTTAC ACAAGCCCATACCTGCGGACGAAGCAAACCCTCGCAGTGAGTGAACGCAG TATGTTAGCGGTCTCGTTGCATGATGTCCCATCTTGAAGTGTTTCATAAG AATGGAGCCAAGGATCAATCATCCTACCCACACGCTTGCCCCTTACACTT GGCGGCCTCTTTTCCAGGGCATGGTAGAAGCGTTTACCTCGAATGAAATC ATTGGTGTTCGGGAAGAGCCTCGCTTGACGGAGCAGCAGTTTGGGAACTT CCAAAACTTGCAGACTATTCAGAGCTCCAAGGCTGAGCGTGCGCGTTTTG GGAGGTTTTACTATCGGTGAGCTCCCACACATTTGGCGTAATTCAAGTAA CCTATCTACCTAAAAAAACCTGCTCTCTCACGCCGTCCATGCTCTTGCGC AAGGTTTCCAGAGGGTGAATCAGGGCTCGATGTGTATAATCGAGCGACAT CATTCATCGCTACTATGTTTCGTGATTTTGCCAATCCATTGATTGCTCGG GACGATATCACTGTTATCATTGTCACGCACGGGCTGACTTTAAGATTGGT GAGTGCTAGCTAGCAGTAGTGAGGCAGCCCTTAGGTAGCCTTGCCGATGA TGTGTTATGTTGTCAGCTGACTGGTAGCTGCAGGGATTGCCACTCCCGGT GGCGCCTGACTCTCTCTGTAACAGCAACCTCTAATGCACCTGTTTATCTG CAGCTTGTAATGCGGTGGTTTCGATACTCCATCCTTGAATTCGAGAGCAC CTTCAACCCTCCCAATGGAGGCTTCGTTGTCATGGAAAGAAGAAACAATG TATGTCCAGAATTGGCTTTGGGATATAATTATGTAATTAGATCACAGGCT TGGCCTCTCACGGGGCCCTTAGACATGAGCTAGCCTTGCTTCTCGCCTGT TTTTCCTGCCTCACCCTAAGTTTTTTTCAAGCCTGAAGGTGAAGGTGAAG CCTGGTACGAGCTTACGAAAGAATCCCTTGAGATGATCAACCTCAAGCCT CAGAGTGCTGAGGGTTTGTCGTTGCCCAAGCTCTTATCTCAGCTACCCAA GGTATCCAAGGCTTCTTTACACTACCATCTGCTGCACTTCTCTCACTTCC TTTTTCTTCTCCTTCAAGGAGGAAGAGGGAGTCCTGCCTCAGACCTCCAT AGCTCCAGTATTGGATGGGGAACCAGACGATCAGCTGTAATGCCACGCTG A
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Coding sequence (CDS) from alignment at C-australica_Contig_977:637..2287+

>mRNA_C-australica_Contig_977.1.1 ID=mRNA_C-australica_Contig_977.1.1|Name=mRNA_C-australica_Contig_977.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1008bp|location=Sequence derived from alignment at C-australica_Contig_977:637..2287+ (Chrysoparadoxa australica CS_1217)
TCCTTGGCAGAATTAAGGCCGCGGAAAGGTACAAGATGCTACTATGCCTC
AACGCGGCGAATGAATTACAGTCCCCATGCGGACCAGAACAGCTTAGCGA
TACATGCTCAGAATGCTGGGGTTGGCAAGATGATCAAGCCGCAACGCATT
GTCATTGTGAGGCATGGTGAGAGTATGGGCAACCTAGATGAAACGGCTTA
TGGAACCATCCCAGACTGGCTCATCCCTTTAACCAAGCAAGGCCACGAGG
ATGCCAGGAACACTGGTCGACTGGTCAAGCAGCACGTCCGTGATGGACCT
GTCTTTTTTTACACAAGCCCATACCTGCGGACGAAGCAAACCCTCGCAGG
CATGGTAGAAGCGTTTACCTCGAATGAAATCATTGGTGTTCGGGAAGAGC
CTCGCTTGACGGAGCAGCAGTTTGGGAACTTCCAAAACTTGCAGACTATT
CAGAGCTCCAAGGCTGAGCGTGCGCGTTTTGGGAGGTTTTACTATCGGTT
TCCAGAGGGTGAATCAGGGCTCGATGTGTATAATCGAGCGACATCATTCA
TCGCTACTATGTTTCGTGATTTTGCCAATCCATTGATTGCTCGGGACGAT
ATCACTGTTATCATTGTCACGCACGGGCTGACTTTAAGATTGCTTGTAAT
GCGGTGGTTTCGATACTCCATCCTTGAATTCGAGAGCACCTTCAACCCTC
CCAATGGAGGCTTCGTTGTCATGGAAAGAAGAAACAATCCTGAAGGTGAA
GGTGAAGCCTGGTACGAGCTTACGAAAGAATCCCTTGAGATGATCAACCT
CAAGCCTCAGAGTGCTGAGGGTTTGTCGTTGCCCAAGCTCTTATCTCAGC
TACCCAAGGTATCCAAGGCTTCTTTACACTACCATCTGCTGCACTTCTCT
CACTTCCTTTTTCTTCTCCTTCAAGGAGGAAGAGGGAGTCCTGCCTCAGA
CCTCCATAGCTCCAGTATTGGATGGGGAACCAGACGATCAGCTGTAATGC
CACGCTGA
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