prot_C-australica_Contig_976.3.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_976.3.1
Unique Nameprot_C-australica_Contig_976.3.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length270
Homology
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BLAST of mRNA_C-australica_Contig_976.3.1 vs. uniprot
Match: A0A835ZF57_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF57_9STRA)

HSP 1 Score: 136 bits (343), Expect = 4.140e-33
Identity = 65/137 (47.45%), Postives = 91/137 (66.42%), Query Frame = 0 
Query:   12 IDLFEAAKVSDVAACQIAVDKGADINF-QYRGGAVMACQGWRLRMGGVEWGLQEWDAPEGVIPEGGDTLLMIAIKCRLAPVVAWIQQLDQLRKTQKNNAGKTAEDVAREYGEEQLIDNDDLGALPASPVSRSKVGVM 147
            +DLFEAAK SD+ AC+ A+  GAD+NF ++ GG+++A +GWRL++GG+EWGLQEWDAP GV+P  GDT+LMIA+KC +  + AW+    + +   KN   KTAEDVAR+YG    +   + G         S  G +
Sbjct:  312 VDLFEAAKASDMEACEAALAAGADLNFNRHNGGSLLAWKGWRLKIGGIEWGLQEWDAPIGVVPVTGDTILMIALKCDMQKLAAWVVARPEYKPEVKNADSKTAEDVARDYGRSHFLTGGEAGTPAGGAAQESTPGAL 448
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BLAST of mRNA_C-australica_Contig_976.3.1 vs. uniprot
Match: D7G360_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G360_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 9.450e-10
Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 0 
Query:    9 EAQIDLFEAAKVSDVAACQIAVDKGADINFQYRGGAVMACQGWRLRMG----GVEWGL---QEWDAPEGVIPEGGDTLLMIAIKCRLAPVVAWIQQLDQLRKTQKNNAGKTAEDVAREYGEEQLI 126
            +AQ++LF A K  D+   + A DKGA++N+      +   + W LR+     G+  G    + W  P+G     GDTL+M+A+KCR     A++   D+L +   N AG +  D+AR  G+E L+
Sbjct:   42 KAQVELFRAIKSGDLTKARKAYDKGANVNWPLDRWIMGGREHWGLRVQVKPLGIYLGFSARESWRVPDGEGANRGDTLVMVALKCRKQEEAAFLLGCDRLNRNCLNEAGNSVADIARATGQEFLL 166
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_976.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835ZF57_9STRA4.140e-3347.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G360_ECTSI9.450e-1033.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 8..128
e-value: 3.6E-6
score: 28.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 14..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 187..213

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_976contigC-australica_Contig_976:5974..8259 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_976.3.1mRNA_C-australica_Contig_976.3.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_976 5858..8259 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_976.3.1 ID=prot_C-australica_Contig_976.3.1|Name=mRNA_C-australica_Contig_976.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=270bp
MPLSDAQREAQIDLFEAAKVSDVAACQIAVDKGADINFQYRGGAVMACQG
WRLRMGGVEWGLQEWDAPEGVIPEGGDTLLMIAIKCRLAPVVAWIQQLDQ
LRKTQKNNAGKTAEDVAREYGEEQLIDNDDLGALPASPVSRSKVGVMESP
SGAPVLQTSMSQSGRYVDLRNQEEQTFHVSGPYSAWSPTKRGSTDSASTA
AGSLCDQPQSPSMTDENAVLRREVYKLRDTVSMLSKQQLKSEKMINDLSN
RLKAVEASQMPLAKPNWMT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf