mRNA_C-australica_Contig_9693.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9693.1.1
Unique NamemRNA_C-australica_Contig_9693.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9693.1.1 vs. uniprot
Match: A0A222E4H2_9RHOB (Heme-binding protein A n=1 Tax=Antarctobacter heliothermus TaxID=74033 RepID=A0A222E4H2_9RHOB)

HSP 1 Score: 558 bits (1439), Expect = 3.130e-197
Identity = 274/280 (97.86%), Postives = 278/280 (99.29%), Query Frame = 1
Query:    1 MLAGGIDLMVEVPPVALSEFQGAEYSVHEQAGPHVWFLILNAKEGPFADKLVRQAANYAINKTALVDEVLEGTAAVAAGPTPPAFAWAYNEELEPYPYDPEKAKELLAEAGVEGAELTFYVTEGGSGMLDPVAMGTAIQADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQVIVQEDAPWVFVANWKQNAVTSDKVEGFSLQPSFFLLLDDVVKN 840
            MLAGGIDLMVEVPPVALSEFQG  Y+VHEQAGPHVWFLILNAKEGPFADKLVRQAANYAINKTALVDEVLEGTAAVAAGPTPPAFAWAYNE+LEPYPYDPEKA+ELLAEAGVEGAELTFYVTEGGSGMLDP+AMGTAIQADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQVIVQEDAPWVFVANWKQNAVTSDKVEGFSLQPSFFLLLDDVVKN
Sbjct:  246 MLAGGIDLMVEVPPVALSEFQGDAYTVHEQAGPHVWFLILNAKEGPFADKLVRQAANYAINKTALVDEVLEGTAAVAAGPTPPAFAWAYNEDLEPYPYDPEKARELLAEAGVEGAELTFYVTEGGSGMLDPIAMGTAIQADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQVIVQEDAPWVFVANWKQNAVTSDKVEGFSLQPSFFLLLDDVVKN 525          
BLAST of mRNA_C-australica_Contig_9693.1.1 vs. uniprot
Match: A0A0B3RV27_9RHOB (Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein n=11 Tax=Rhodobacterales TaxID=204455 RepID=A0A0B3RV27_9RHOB)

HSP 1 Score: 539 bits (1388), Expect = 1.760e-189
Identity = 261/280 (93.21%), Postives = 273/280 (97.50%), Query Frame = 1
Query:    1 MLAGGIDLMVEVPPVALSEFQGAEYSVHEQAGPHVWFLILNAKEGPFADKLVRQAANYAINKTALVDEVLEGTAAVAAGPTPPAFAWAYNEELEPYPYDPEKAKELLAEAGVEGAELTFYVTEGGSGMLDPVAMGTAIQADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQVIVQEDAPWVFVANWKQNAVTSDKVEGFSLQPSFFLLLDDVVKN 840
            MLAGGIDLMVEVPPVALSEFQGAEY+VHEQAGPHVWFLILNAKEGPFADKLVRQAANYA+NKTALVD+VLEGTAAVAAGPTPPAFAWAYNE+LEPYPYDP+KA+ LLAEAG EGAELTF+VTEGGSGMLDP+AMGTAIQADLEAVGFDV IETYEWNTFLG VNPGL GKADMAEMAWMTNDPDTLPFLALRT+AWP+ GGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQ IVQEDAPWVFVANWKQNAVTS++VEGFSLQPSFFLLLDDVVKN
Sbjct:  246 MLAGGIDLMVEVPPVALSEFQGAEYTVHEQAGPHVWFLILNAKEGPFADKLVRQAANYAVNKTALVDDVLEGTAAVAAGPTPPAFAWAYNEDLEPYPYDPDKARALLAEAGAEGAELTFFVTEGGSGMLDPIAMGTAIQADLEAVGFDVTIETYEWNTFLGEVNPGLAGKADMAEMAWMTNDPDTLPFLALRTDAWPEAGGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQTIVQEDAPWVFVANWKQNAVTSERVEGFSLQPSFFLLLDDVVKN 525          
BLAST of mRNA_C-australica_Contig_9693.1.1 vs. uniprot
Match: A0A254QYF2_9RHOB (Peptide ABC transporter substrate-binding protein n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A254QYF2_9RHOB)

HSP 1 Score: 526 bits (1355), Expect = 1.820e-184
Identity = 257/280 (91.79%), Postives = 267/280 (95.36%), Query Frame = 1
Query:    1 MLAGGIDLMVEVPPVALSEFQGAEYSVHEQAGPHVWFLILNAKEGPFADKLVRQAANYAINKTALVDEVLEGTAAVAAGPTPPAFAWAYNEELEPYPYDPEKAKELLAEAGVEGAELTFYVTEGGSGMLDPVAMGTAIQADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQVIVQEDAPWVFVANWKQNAVTSDKVEGFSLQPSFFLLLDDVVKN 840
            MLAGGIDLMVEVPPVALSEF+  +YSV EQAGPHVWFLILNAKEGPFADKLVRQAANYAINK ALV+ VLEGTA VAAGPTPPAFAWAYN +LEPYPYDP+KAKELLAEAG EGA LTFYVTEGGSGMLDP+AMGTA+QADLEAVGFDV IETYEWNTFLG VNPGLEGKADMAEMAWMTNDPDTLPFLALRT+AWPDKGGFNSGYYSNPKVDELLEAARVATDQ+ERA LYKEMQVIVQEDAPWVFVANWKQNAVTSD+VE FSLQPSFFLLLDDVVKN
Sbjct:  246 MLAGGIDLMVEVPPVALSEFESEQYSVFEQAGPHVWFLILNAKEGPFADKLVRQAANYAINKEALVNNVLEGTAEVAAGPTPPAFAWAYNPDLEPYPYDPDKAKELLAEAGAEGASLTFYVTEGGSGMLDPIAMGTAMQADLEAVGFDVTIETYEWNTFLGEVNPGLEGKADMAEMAWMTNDPDTLPFLALRTDAWPDKGGFNSGYYSNPKVDELLEAARVATDQEERAALYKEMQVIVQEDAPWVFVANWKQNAVTSDRVENFSLQPSFFLLLDDVVKN 525          
BLAST of mRNA_C-australica_Contig_9693.1.1 vs. uniprot
Match: A0A7Y6ZDY4_9RHOB (ABC transporter substrate-binding protein n=3 Tax=Rhodobacterales TaxID=204455 RepID=A0A7Y6ZDY4_9RHOB)

HSP 1 Score: 525 bits (1352), Expect = 6.840e-184
Identity = 257/280 (91.79%), Postives = 265/280 (94.64%), Query Frame = 1
Query:    1 MLAGGIDLMVEVPPVALSEFQGAEYSVHEQAGPHVWFLILNAKEGPFADKLVRQAANYAINKTALVDEVLEGTAAVAAGPTPPAFAWAYNEELEPYPYDPEKAKELLAEAGVEGAELTFYVTEGGSGMLDPVAMGTAIQADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQVIVQEDAPWVFVANWKQNAVTSDKVEGFSLQPSFFLLLDDVVKN 840
            MLAGGIDLMVEVPPVALSEFQ   Y V+EQAGPHVWFLILNAKEGPFAD  VRQAANYA+NK ALV+EVLEGTA VAAGPTPPAFAWAYN+EL PYPYDPEKAK LLAEAG EGA+LTFYVTEGGSGMLDP+AMGTAIQADLEAVGFDVKIETYEWNTFLG VNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWP+ GGFNSGYYSNPKVDELLEAARVATDQDERA LYKEMQ IVQEDAPWVFVANWKQNAVTSDKVEGF+LQPSFFLLLDDVVKN
Sbjct:  254 MLAGGIDLMVEVPPVALSEFQSDAYQVYEQAGPHVWFLILNAKEGPFADVRVRQAANYAVNKEALVNEVLEGTADVAAGPTPPAFAWAYNDELSPYPYDPEKAKSLLAEAGAEGADLTFYVTEGGSGMLDPIAMGTAIQADLEAVGFDVKIETYEWNTFLGEVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPEAGGFNSGYYSNPKVDELLEAARVATDQDERAALYKEMQTIVQEDAPWVFVANWKQNAVTSDKVEGFALQPSFFLLLDDVVKN 533          
BLAST of mRNA_C-australica_Contig_9693.1.1 vs. uniprot
Match: Q1GD48_RUEST (Extracellular solute-binding protein family 5 n=14 Tax=Rhodobacterales TaxID=204455 RepID=Q1GD48_RUEST)

HSP 1 Score: 523 bits (1348), Expect = 2.340e-183
Identity = 254/280 (90.71%), Postives = 267/280 (95.36%), Query Frame = 1
Query:    1 MLAGGIDLMVEVPPVALSEFQGAEYSVHEQAGPHVWFLILNAKEGPFADKLVRQAANYAINKTALVDEVLEGTAAVAAGPTPPAFAWAYNEELEPYPYDPEKAKELLAEAGVEGAELTFYVTEGGSGMLDPVAMGTAIQADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQVIVQEDAPWVFVANWKQNAVTSDKVEGFSLQPSFFLLLDDVVKN 840
            MLAGGIDLMVEVPPVALSEFQG  ++VHEQAGPHVWFLILNAKEGPFADK VRQAANYAINK+A+V++VLEGTA VAAGPTPPAFAWAYNE LEPYPYDP+KA+ELLAEAG EGAELTFYVTEGGSGMLDP+AMGTAIQADL AVG DVKIETYEWNTFLG VNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERA+LY+EMQ IVQEDAPWVFVANWKQNAVTSD+V  F+LQPSFFLLLDDV KN
Sbjct:  249 MLAGGIDLMVEVPPVALSEFQGDAFTVHEQAGPHVWFLILNAKEGPFADKRVRQAANYAINKSAIVNDVLEGTAEVAAGPTPPAFAWAYNETLEPYPYDPDKARELLAEAGAEGAELTFYVTEGGSGMLDPIAMGTAIQADLNAVGLDVKIETYEWNTFLGEVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERAKLYQEMQTIVQEDAPWVFVANWKQNAVTSDRVGDFALQPSFFLLLDDVTKN 528          
BLAST of mRNA_C-australica_Contig_9693.1.1 vs. uniprot
Match: A0A1I6E2W3_9RHOB (Peptide/nickel transport system substrate-binding protein n=8 Tax=Rhodobacterales TaxID=204455 RepID=A0A1I6E2W3_9RHOB)

HSP 1 Score: 522 bits (1344), Expect = 8.540e-183
Identity = 253/280 (90.36%), Postives = 267/280 (95.36%), Query Frame = 1
Query:    1 MLAGGIDLMVEVPPVALSEFQGAEYSVHEQAGPHVWFLILNAKEGPFADKLVRQAANYAINKTALVDEVLEGTAAVAAGPTPPAFAWAYNEELEPYPYDPEKAKELLAEAGVEGAELTFYVTEGGSGMLDPVAMGTAIQADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQVIVQEDAPWVFVANWKQNAVTSDKVEGFSLQPSFFLLLDDVVKN 840
            MLAGGIDLMVEVPPVALSEFQG  Y++HEQAGPHVWFLILNAKEGPFAD  VRQAANYA+NK ALV+EVLEGTA VAAGPTPPAFAWAYN +LEPYP+DP+KA+ LLAEAG EGAELTFYVTEGGSGMLDP+AMGTAIQADLEAVGFDV IETYEWNTFLG VNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNP+VD LLEAARVATDQDERARLY+EMQ IVQEDAPWVFVANWKQNAVTSD+VEGF+LQPSFFLLLD+VVKN
Sbjct:  246 MLAGGIDLMVEVPPVALSEFQGDAYTLHEQAGPHVWFLILNAKEGPFADVRVRQAANYAVNKEALVNEVLEGTAEVAAGPTPPAFAWAYNPDLEPYPFDPDKARALLAEAGAEGAELTFYVTEGGSGMLDPIAMGTAIQADLEAVGFDVTIETYEWNTFLGEVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPEVDALLEAARVATDQDERARLYREMQTIVQEDAPWVFVANWKQNAVTSDRVEGFALQPSFFLLLDEVVKN 525          
BLAST of mRNA_C-australica_Contig_9693.1.1 vs. uniprot
Match: A0A2Y9B624_9RHOB (Peptide/nickel transport system substrate-binding protein n=3 Tax=Rhodobacterales TaxID=204455 RepID=A0A2Y9B624_9RHOB)

HSP 1 Score: 522 bits (1344), Expect = 9.140e-183
Identity = 253/280 (90.36%), Postives = 268/280 (95.71%), Query Frame = 1
Query:    1 MLAGGIDLMVEVPPVALSEFQGAEYSVHEQAGPHVWFLILNAKEGPFADKLVRQAANYAINKTALVDEVLEGTAAVAAGPTPPAFAWAYNEELEPYPYDPEKAKELLAEAGVEGAELTFYVTEGGSGMLDPVAMGTAIQADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQVIVQEDAPWVFVANWKQNAVTSDKVEGFSLQPSFFLLLDDVVKN 840
            MLAGGIDLMVEVPPVALS+FQ A Y+VHEQAGPHVWFLILNAKEGPFAD  VRQAANYAINK+A+V++VLEGTA VAAGPTPPAFAWAYNE LEPYPYDP+KA+ L+AEAG EGAELTFYVTEGGSGMLDPVAMGTA+QADLEAVGFDV IETYEWNTFLGNVNPGLEGKADMA+MAWMTNDPDTLP+LALRTEAWPD+GGFNSGYYSNP+VD LLE ARVATDQDERARLYKEMQ IVQEDAPWVFVANWKQNAVTSD+VEGFSLQPSFFLLLDDVVKN
Sbjct:  248 MLAGGIDLMVEVPPVALSQFQDAPYTVHEQAGPHVWFLILNAKEGPFADVRVRQAANYAINKSAIVNDVLEGTAEVAAGPTPPAFAWAYNEALEPYPYDPDKARALIAEAGAEGAELTFYVTEGGSGMLDPVAMGTAMQADLEAVGFDVSIETYEWNTFLGNVNPGLEGKADMAQMAWMTNDPDTLPYLALRTEAWPDQGGFNSGYYSNPEVDALLEQARVATDQDERARLYKEMQEIVQEDAPWVFVANWKQNAVTSDRVEGFSLQPSFFLLLDDVVKN 527          
BLAST of mRNA_C-australica_Contig_9693.1.1 vs. uniprot
Match: A0A1B1PXQ1_9RHOB (Peptide ABC transporter substrate-binding protein n=6 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A1B1PXQ1_9RHOB)

HSP 1 Score: 520 bits (1339), Expect = 4.910e-182
Identity = 252/280 (90.00%), Postives = 266/280 (95.00%), Query Frame = 1
Query:    1 MLAGGIDLMVEVPPVALSEFQGAEYSVHEQAGPHVWFLILNAKEGPFADKLVRQAANYAINKTALVDEVLEGTAAVAAGPTPPAFAWAYNEELEPYPYDPEKAKELLAEAGVEGAELTFYVTEGGSGMLDPVAMGTAIQADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQVIVQEDAPWVFVANWKQNAVTSDKVEGFSLQPSFFLLLDDVVKN 840
            MLAGGIDLMVEVPPVALSEFQG  Y++HEQAGPHVWFLILNAKEGPFADK VRQAANYAINK ALV++VLEGTA VAAGPTPPAFAWAYN++LEPYPYDPEKAKELLAEAG E AELTFYVTEGGSGMLDP+AMGTAIQADL AVGFD KIETYEWNTFLG VNPGLEGKADMAEMAWMTNDPDTLPFLALR++AWPDKGGFNSGYYSNP+VDELLEAARVATDQ ERA LYK+MQ IVQEDAPWVFVANWKQNAVTS++VE F+LQPSFFLLLDDVVKN
Sbjct:  246 MLAGGIDLMVEVPPVALSEFQGEAYTLHEQAGPHVWFLILNAKEGPFADKRVRQAANYAINKEALVNDVLEGTAEVAAGPTPPAFAWAYNDDLEPYPYDPEKAKELLAEAGAERAELTFYVTEGGSGMLDPIAMGTAIQADLNAVGFDTKIETYEWNTFLGEVNPGLEGKADMAEMAWMTNDPDTLPFLALRSDAWPDKGGFNSGYYSNPEVDELLEAARVATDQGERAELYKQMQTIVQEDAPWVFVANWKQNAVTSERVENFTLQPSFFLLLDDVVKN 525          
BLAST of mRNA_C-australica_Contig_9693.1.1 vs. uniprot
Match: UPI001F56D779 (ABC transporter substrate-binding protein n=1 Tax=Aliiroseovarius sp. N1F302 TaxID=2925839 RepID=UPI001F56D779)

HSP 1 Score: 520 bits (1338), Expect = 6.970e-182
Identity = 251/280 (89.64%), Postives = 267/280 (95.36%), Query Frame = 1
Query:    1 MLAGGIDLMVEVPPVALSEFQGAEYSVHEQAGPHVWFLILNAKEGPFADKLVRQAANYAINKTALVDEVLEGTAAVAAGPTPPAFAWAYNEELEPYPYDPEKAKELLAEAGVEGAELTFYVTEGGSGMLDPVAMGTAIQADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQVIVQEDAPWVFVANWKQNAVTSDKVEGFSLQPSFFLLLDDVVKN 840
            MLAGGIDL+VEVPPVALSEFQG  Y+VHEQAGPHVWFLILNAKEGPFAD  VRQAANYAINK A+V++VLEGTA VAAGPTPPAFAWAYN +LEPYPYDP+KA+EL+AEAG+EGAELTFYVTEGGSGMLDP+AMGTA+QADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMA+MAWMTNDPDTLPFL LRT AWPD+GGFNSGYYSN KVDELLEAAR ATDQ+ERA LYKEMQ IVQEDAPWVFVANWKQNAVTSD+VEGFSLQPSFFLLLDDVVKN
Sbjct:  246 MLAGGIDLIVEVPPVALSEFQGDAYTVHEQAGPHVWFLILNAKEGPFADVRVRQAANYAINKEAIVNDVLEGTAEVAAGPTPPAFAWAYNPDLEPYPYDPDKARELIAEAGMEGAELTFYVTEGGSGMLDPIAMGTAMQADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMAQMAWMTNDPDTLPFLTLRTSAWPDQGGFNSGYYSNAKVDELLEAARAATDQNERAALYKEMQTIVQEDAPWVFVANWKQNAVTSDRVEGFSLQPSFFLLLDDVVKN 525          
BLAST of mRNA_C-australica_Contig_9693.1.1 vs. uniprot
Match: A0A1B0ZTW2_9RHOB (Peptide ABC transporter substrate-binding protein n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A1B0ZTW2_9RHOB)

HSP 1 Score: 519 bits (1337), Expect = 9.550e-182
Identity = 250/280 (89.29%), Postives = 266/280 (95.00%), Query Frame = 1
Query:    1 MLAGGIDLMVEVPPVALSEFQGAEYSVHEQAGPHVWFLILNAKEGPFADKLVRQAANYAINKTALVDEVLEGTAAVAAGPTPPAFAWAYNEELEPYPYDPEKAKELLAEAGVEGAELTFYVTEGGSGMLDPVAMGTAIQADLEAVGFDVKIETYEWNTFLGNVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKGGFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQVIVQEDAPWVFVANWKQNAVTSDKVEGFSLQPSFFLLLDDVVKN 840
            MLAGGIDLMVEVPPVAL EFQ   Y+VHEQAGPHVWFLILNAKEGPFADK VRQAANYAINK+A+V++VLEGTA VAAGPTPPAFAWAYNEELEPYPYDP KAKEL+++AG EGAELTFYVTEGGSGMLDP+AMGTAIQADLEAVGFDVKIETYEWNTFLG VNPGLEGKADMAEMAWMTNDPDTLPFLALRT AWP++GGFNSGYYSNPKVDELLEAAR ATDQ+ERA+LY+EMQ IVQEDAPWVFVANWKQNAVTSD+VEGF+LQPSFFLLLDDV K 
Sbjct:  245 MLAGGIDLMVEVPPVALGEFQSDAYTVHEQAGPHVWFLILNAKEGPFADKRVRQAANYAINKSAIVNDVLEGTAEVAAGPTPPAFAWAYNEELEPYPYDPAKAKELISDAGAEGAELTFYVTEGGSGMLDPLAMGTAIQADLEAVGFDVKIETYEWNTFLGQVNPGLEGKADMAEMAWMTNDPDTLPFLALRTSAWPEEGGFNSGYYSNPKVDELLEAARAATDQEERAKLYREMQTIVQEDAPWVFVANWKQNAVTSDRVEGFALQPSFFLLLDDVAKK 524          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9693.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A222E4H2_9RHOB3.130e-19797.86Heme-binding protein A n=1 Tax=Antarctobacter heli... [more]
A0A0B3RV27_9RHOB1.760e-18993.21Peptide/opine/nickel uptake family ABC transporter... [more]
A0A254QYF2_9RHOB1.820e-18491.79Peptide ABC transporter substrate-binding protein ... [more]
A0A7Y6ZDY4_9RHOB6.840e-18491.79ABC transporter substrate-binding protein n=3 Tax=... [more]
Q1GD48_RUEST2.340e-18390.71Extracellular solute-binding protein family 5 n=14... [more]
A0A1I6E2W3_9RHOB8.540e-18390.36Peptide/nickel transport system substrate-binding ... [more]
A0A2Y9B624_9RHOB9.140e-18390.36Peptide/nickel transport system substrate-binding ... [more]
A0A1B1PXQ1_9RHOB4.910e-18290.00Peptide ABC transporter substrate-binding protein ... [more]
UPI001F56D7796.970e-18289.64ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A1B0ZTW2_9RHOB9.550e-18289.29Peptide ABC transporter substrate-binding protein ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9693contigC-australica_Contig_9693:21..863 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog292414.TM1040_2686
PFAMsSBP_bac_5
Model size843
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02035
KEGG TC3.A.1.5
KEGG Pathwayko02024,map02024
KEGG ModuleM00239
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.83e-184
EggNOG OGsCOG0747@1|root,COG0747@2|Bacteria,1MUZH@1224|Proteobacteria,2TR1D@28211|Alphaproteobacteria,4NA81@97050|Ruegeria
Descriptionhmm pf00496
Cds size843
COG categoryE
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588835.0385313-CDS-C-australica_Contig_9693:20..8631682588835.0385313-CDS-C-australica_Contig_9693:20..863Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9693 21..863 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9693.1.1prot_C-australica_Contig_9693.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9693 21..863 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9693.1.1

>prot_C-australica_Contig_9693.1.1 ID=prot_C-australica_Contig_9693.1.1|Name=mRNA_C-australica_Contig_9693.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=281bp
MLAGGIDLMVEVPPVALSEFQGAEYSVHEQAGPHVWFLILNAKEGPFADK
LVRQAANYAINKTALVDEVLEGTAAVAAGPTPPAFAWAYNEELEPYPYDP
EKAKELLAEAGVEGAELTFYVTEGGSGMLDPVAMGTAIQADLEAVGFDVK
IETYEWNTFLGNVNPGLEGKADMAEMAWMTNDPDTLPFLALRTEAWPDKG
GFNSGYYSNPKVDELLEAARVATDQDERARLYKEMQVIVQEDAPWVFVAN
WKQNAVTSDKVEGFSLQPSFFLLLDDVVKN*
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mRNA from alignment at C-australica_Contig_9693:21..863-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9693.1.1 ID=mRNA_C-australica_Contig_9693.1.1|Name=mRNA_C-australica_Contig_9693.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=843bp|location=Sequence derived from alignment at C-australica_Contig_9693:21..863- (Chrysoparadoxa australica CS_1217)
ATGCTGGCTGGTGGCATCGACCTGATGGTCGAGGTGCCGCCCGTAGCGCT GAGCGAGTTTCAGGGCGCGGAATACTCCGTGCATGAACAAGCCGGCCCGC ATGTGTGGTTCCTGATCCTGAACGCCAAAGAAGGCCCCTTTGCGGACAAG CTGGTCCGGCAAGCCGCGAACTACGCGATCAACAAGACCGCGCTGGTGGA TGAGGTGCTGGAAGGCACCGCCGCCGTCGCCGCAGGCCCGACGCCCCCGG CCTTTGCTTGGGCGTATAACGAGGAGCTGGAGCCTTATCCCTATGATCCG GAAAAGGCCAAGGAACTGTTGGCCGAGGCCGGTGTCGAGGGTGCCGAACT GACGTTCTATGTGACTGAAGGCGGATCTGGAATGTTGGACCCGGTGGCGA TGGGCACGGCCATTCAGGCGGATCTTGAGGCCGTGGGGTTTGACGTCAAA ATAGAGACCTATGAGTGGAATACTTTCCTTGGCAACGTGAATCCGGGGCT GGAGGGAAAGGCGGACATGGCCGAAATGGCCTGGATGACCAATGACCCCG ATACGCTGCCGTTTTTGGCATTGCGGACAGAGGCGTGGCCGGACAAGGGC GGGTTCAACTCTGGTTATTATTCCAATCCGAAGGTGGATGAGTTGCTGGA GGCTGCCCGTGTCGCCACCGATCAGGACGAACGCGCGCGTCTTTACAAGG AAATGCAGGTGATTGTGCAGGAAGATGCGCCTTGGGTCTTTGTCGCGAAC TGGAAACAGAACGCGGTGACCAGTGACAAGGTCGAAGGTTTCTCTTTGCA GCCTTCGTTCTTTTTGCTGCTGGATGACGTTGTGAAAAACTGA
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Coding sequence (CDS) from alignment at C-australica_Contig_9693:21..863-

>mRNA_C-australica_Contig_9693.1.1 ID=mRNA_C-australica_Contig_9693.1.1|Name=mRNA_C-australica_Contig_9693.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=843bp|location=Sequence derived from alignment at C-australica_Contig_9693:21..863- (Chrysoparadoxa australica CS_1217)
ATGCTGGCTGGTGGCATCGACCTGATGGTCGAGGTGCCGCCCGTAGCGCT
GAGCGAGTTTCAGGGCGCGGAATACTCCGTGCATGAACAAGCCGGCCCGC
ATGTGTGGTTCCTGATCCTGAACGCCAAAGAAGGCCCCTTTGCGGACAAG
CTGGTCCGGCAAGCCGCGAACTACGCGATCAACAAGACCGCGCTGGTGGA
TGAGGTGCTGGAAGGCACCGCCGCCGTCGCCGCAGGCCCGACGCCCCCGG
CCTTTGCTTGGGCGTATAACGAGGAGCTGGAGCCTTATCCCTATGATCCG
GAAAAGGCCAAGGAACTGTTGGCCGAGGCCGGTGTCGAGGGTGCCGAACT
GACGTTCTATGTGACTGAAGGCGGATCTGGAATGTTGGACCCGGTGGCGA
TGGGCACGGCCATTCAGGCGGATCTTGAGGCCGTGGGGTTTGACGTCAAA
ATAGAGACCTATGAGTGGAATACTTTCCTTGGCAACGTGAATCCGGGGCT
GGAGGGAAAGGCGGACATGGCCGAAATGGCCTGGATGACCAATGACCCCG
ATACGCTGCCGTTTTTGGCATTGCGGACAGAGGCGTGGCCGGACAAGGGC
GGGTTCAACTCTGGTTATTATTCCAATCCGAAGGTGGATGAGTTGCTGGA
GGCTGCCCGTGTCGCCACCGATCAGGACGAACGCGCGCGTCTTTACAAGG
AAATGCAGGTGATTGTGCAGGAAGATGCGCCTTGGGTCTTTGTCGCGAAC
TGGAAACAGAACGCGGTGACCAGTGACAAGGTCGAAGGTTTCTCTTTGCA
GCCTTCGTTCTTTTTGCTGCTGGATGACGTTGTGAAAAACTGA
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