mRNA_C-australica_Contig_10158.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10158.1.1
Unique NamemRNA_C-australica_Contig_10158.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: UPI00146165D3 (GAF domain-containing protein n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI00146165D3)

HSP 1 Score: 530 bits (1365), Expect = 2.980e-188
Identity = 274/278 (98.56%), Postives = 276/278 (99.28%), Query Frame = 1
Query:    1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLSAFL 834
            LSI TGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFED PKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMD+GVIS+AIKKDEGDKVLVSVSDNGIGLSAFL
Sbjct:   51 LSIPTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDLPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDKGVISVAIKKDEGDKVLVSVSDNGIGLSAFL 328          
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A3D4UUL8_9BACT (GAF domain-containing protein n=4 Tax=Balneola sp. TaxID=2024824 RepID=A0A3D4UUL8_9BACT)

HSP 1 Score: 380 bits (977), Expect = 3.440e-129
Identity = 186/278 (66.91%), Postives = 231/278 (83.09%), Query Frame = 1
Query:    1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLSAFL 834
            LS+ TGPVKD+IKG +IPR+KGVAGWVL+N+KPYLVNDM+ S+EF+GDIS+ FTTRNM+CVPMFDS N A+GIMQALNKK G+DF EKDI  L TL+ HA+LSIEK +EVD LKN I +K+ RLKE+H+GFEN+L+AL+A VQLQ  +L+D + +F+MKSTG+RIE IA AHEVLF ++  + +D+GFYL HLT +I  IF DF KDI Y+ DIDK+ LK   ALTVGLI+ EVILNM+REAF G D+G ISIA+KKD GDKVL+S+SDNG G+S +L
Sbjct:   58 LSVPTGPVKDEIKGQIIPRDKGVAGWVLRNRKPYLVNDMANSKEFFGDISKGFTTRNMVCVPMFDSTNGAIGIMQALNKKNGEDFTEKDIPVLETLSAHAALSIEKAKEVDELKNTIKDKEVRLKEIHRGFENSLSALNALVQLQVPLLTDENAKFLMKSTGSRIETIAHAHEVLFNSEDNELIDVGFYLGHLTSTIVEIFGDFDKDISYNLDIDKIELKASTALTVGLIINEVILNMYREAFIGYDKGKISIAVKKDGGDKVLISISDNGNGISEYL 335          
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A1B6Y9U5_9BACT (GAF domain-containing protein n=1 Tax=Balneola sp. EhC07 TaxID=1849360 RepID=A0A1B6Y9U5_9BACT)

HSP 1 Score: 368 bits (944), Expect = 3.620e-124
Identity = 178/278 (64.03%), Postives = 228/278 (82.01%), Query Frame = 1
Query:    1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLSAFL 834
            LS+ TGPV+D++KG +IPR+KGVAGWVLKN+KPYLVNDM++S+EF+GDIS+ F TRNMICVPMFDS N  +GIMQALNKK  ++F EKDI  L TLA HA+LSIEK +EVD LKN I +K+ RLKE+H+GFEN+L+AL+A VQLQ  +LSD + +F+MKSTG+RIE IA AH++LF ++  + +D+GFYL HLT +I  IF D+ KDI Y+ DIDK+ LK   ALT GLI+ EVILNM+R+AF G D+G I+IA+KKD GDKVL+S+SDNG G+S +L
Sbjct:   58 LSVPTGPVRDEVKGQIIPRDKGVAGWVLKNEKPYLVNDMAKSKEFFGDISKGFKTRNMICVPMFDSKNNVIGIMQALNKKESREFAEKDIPVLETLAAHAALSIEKAKEVDDLKNTIKDKEHRLKEVHQGFENSLSALNALVQLQVPLLSDENAKFLMKSTGSRIETIAHAHKILFNSEDNELIDVGFYLGHLTSTIVEIFGDYDKDISYNLDIDKIELKASTALTAGLIINEVILNMYRDAFIGYDKGKIAIAVKKDGGDKVLISISDNGNGISEYL 335          
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A3D1GDK5_9BACT (GAF domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A3D1GDK5_9BACT)

HSP 1 Score: 297 bits (761), Expect = 1.470e-96
Identity = 147/278 (52.88%), Postives = 205/278 (73.74%), Query Frame = 1
Query:    1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLSAFL 834
            +SI TGPVKD+IKGM IPR+KG+AGWVLKNKKP++ N   +S+ F GD+S +F TRN++CVP+ +S +EA+G++Q LNK  G+DF E++I    TLAGH +LSIEKV+EVD LK +I +K+ RLKE+H+G ++NL A++A +QL+   L+D   +F++K+TG+RIE IA AH VL+  D  + +DLG YL  LT  +S IFED   D+    D DK+ +K+  ALTVGLIV EV++ MF+EAF     G +S+A+KKDEG+ V +S+SD+G GL   L
Sbjct:   58 VSIPTGPVKDKIKGMSIPRDKGIAGWVLKNKKPFISNVPKDSDIFLGDLSTEFETRNILCVPLINSKDEAIGVIQVLNKNEGQDFTEENIPVFETLAGHIALSIEKVKEVDELKKQIKDKENRLKEVHQGLKSNLAAINALIQLEVPELADEQAKFILKATGSRIETIANAHHVLYNQDEFEYLDLGKYLGRLTGMVSEIFEDPEYDVSLMLDFDKIAIKSSVALTVGLIVNEVLVYMFKEAFAERGYGKVSLAVKKDEGNAVAISISDDGNGLQTIL 335          
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A3M8G098_9BACT (GAF domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8G098_9BACT)

HSP 1 Score: 287 bits (734), Expect = 1.770e-92
Identity = 138/278 (49.64%), Postives = 202/278 (72.66%), Query Frame = 1
Query:    1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLSAFL 834
            +SI TGP+KD+I GM IP++KGVAGWVL+NK+PY+ N +  S+ F+ D+S +F TRN++C+P+ +S  EA+G++Q LN++GGKDF E+ I    TLAGH +LSIEKV+EVD LK +I EK+E+LKE+H+G ++NL A++A VQL+   + +    F+MK+TG RIEAIA AH +L+  +  + +DLG YL  LT   + IFE   K+I    D+DK+ LK   ALTVGLI  EV+++M+ +AF     G I++ +KKDE + V++S+SD+G GL++ L
Sbjct:   58 VSIPTGPIKDKITGMTIPKDKGVAGWVLQNKQPYISNSLGNSDIFWKDLSSEFNTRNIVCLPLLNSREEAIGVIQVLNREGGKDFKEEQIPIFETLAGHIALSIEKVKEVDDLKKKIKEKEEKLKEVHQGLKSNLGAINALVQLEIPNVENDHARFVMKATGTRIEAIANAHHILYNQEEFEYIDLGLYLGRLTSMTTEIFESEEKEISLLLDMDKIALKASVALTVGLITNEVLIHMYNDAFENSSYGKIALGVKKDEQNCVVISISDDGNGLNSIL 335          
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A6M1T3S9_9BACT (GAF domain-containing protein n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1T3S9_9BACT)

HSP 1 Score: 233 bits (595), Expect = 2.250e-71
Identity = 108/274 (39.42%), Postives = 184/274 (67.15%), Query Frame = 1
Query:    1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGL 822
            +S+ TGPVKD+IKG  IP+NKGV GWV++NK+PYL ND+  SE F+G+++E+F TRN+ICVP+ DS N A+G++QA+NK+G +DF   DI     LA H S++IE+ +  + +K+ I +K+  L E+H   +NNL  +S  ++++   + D     ++K+T +R++++ + H++L K     EV+LG YLS+LTE IS    +   ++  + + D +H+  D A+  GL++ E+++N+++ AF  + +G I+I +   + +K+ + V DNGIG+
Sbjct:   73 ISLPTGPVKDEIKGKRIPKNKGVGGWVIENKRPYLSNDLENSEIFFGEVAEEFQTRNIICVPLIDSKNNAMGVLQAINKRGLQDFTPHDIPVFQALASHVSMAIERTRMEERMKSRIKQKEVLLTEIHHRVKNNLATISGLIEMELDTVGDKHARHVLKNTYSRMQSMGEVHDMLCKKGLFDEVELGMYLSNLTEKISKTLSNPNTEVNITVEADTIHMAADRAMICGLVLNELLVNIYKHAFEDLKEGNITINLLALKDNKIQLDVRDNGIGI 346          
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A6A8Q5L0_9BACT (GAF domain-containing protein n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q5L0_9BACT)

HSP 1 Score: 224 bits (571), Expect = 8.210e-68
Identity = 103/278 (37.05%), Postives = 188/278 (67.63%), Query Frame = 1
Query:    1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLSAFL 834
            +SI TGPV++ I+G+ IP+NKG+ GWVL++ KPY  ND+S+SE F+ D+++DFT++N+ICVP+  S+ +  G++QA+N+K G DF EKD+     LA H S++I++ +  + +   + +++ +L E+H   +NNL  +S  +QL    LS+ +   ++K TG+RI +++  H +L+      E++LG Y+  + ++I +IF +  K+I  + D+D++ ++ + A+T GLI+ E+++N ++ AF GM++G I + ++    + V ++VSDNGIG+ + L
Sbjct:   64 VSIPTGPVQENIEGISIPKNKGIGGWVLRHNKPYFCNDISKSELFWKDLTDDFTSQNIICVPLCVSSGKPFGVIQAVNRKSGGDFIEKDVIVFEALAMHISIAIDRARNYEEMLKRLEDREIQLSEIHHRLKNNLATISGLIQLDLADLSEENCRDLLKVTGSRIRSVSDVHSLLYDQKDLGELELGNYIQRVAQNIKHIFSEPVKEISITTDLDEIQIEANRAMTAGLIINELLINGYKHAFEGMEKGEIGLQLRDIGDNTVKITVSDNGIGMKSIL 341          
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A2D8CJ87_9BACT (Histidine kinase domain-containing protein n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2D8CJ87_9BACT)

HSP 1 Score: 221 bits (562), Expect = 1.550e-66
Identity = 101/275 (36.73%), Postives = 181/275 (65.82%), Query Frame = 1
Query:    1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIGLS 825
            +SI TGPVKD+I GM +P++KG+ GWV+   +P++ ND+ ES+ F+ D+S  FTTRN+ICVP+ DS   A G++QA+NKKGGK F  +D+    +LA H S +IE+ +  D ++ ++ E+D ++ E+H   +NNL+ +   ++   + + D     ++ ST +RI ++A+AH +L+     ++++L  YL+ + +++  +F+   KDIR +  ++++ L  + ++  GLI+ E+++N ++ AFT  + G I I++KK   DK+ + V+D+GIG S
Sbjct:   62 VSIPTGPVKDEIMGMRVPKSKGIGGWVISYNQPFISNDVVESDIFWKDLSTGFTTRNIICVPLQDSKGNAFGVLQAINKKGGKSFENEDVPVFESLALHVSSAIERSKRYDEIEEKLKERDMQMMEIHHRLKNNLSMICGLLEFDLRDVKDEKYRDLLSSTNSRIRSVAEAHSLLYDQRDSEKLELSRYLTAIAQNVEKVFDTSEKDIRLNIQLEEITLDPNRSMLCGLILNELLINAYKHAFTKKNTGEIVISLKKTSKDKIALIVTDDGIGFS 336          
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: UPI000369A130 (GAF domain-containing protein n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI000369A130)

HSP 1 Score: 218 bits (556), Expect = 1.040e-65
Identity = 105/273 (38.46%), Postives = 178/273 (65.20%), Query Frame = 1
Query:    1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIG 819
            +SI TGPVKD++KGM IP+NKG+ GWV+   +P++ ND+ ES+ F+ D+S  FTTRN+ICVP+ +S  EA G+MQA+NKK GK F  +D+      A H + +IE+ ++ D L+N++++++ +L E+H   +NNL  +SA ++   + + D   + ++ +T +RI ++A AH +L+    + ++DL  YL  +  ++ NIF    KDI  S   + V L +  ++  GLI+ E+++N ++ AF   D G I I++K+   DK+++ V+D+GIG
Sbjct:   55 ISIPTGPVKDEVKGMTIPKNKGIGGWVISYNQPFISNDVVESDIFWKDLSTGFTTRNIICVPLRNSKGEAFGVMQAINKKEGKPFVNEDVPVFEAFAIHVATAIERSKKYDELENKLHDRNTQLSEIHHRLKNNLAIISALIEFDLEEVQDERSKEVLSATSSRIRSVADAHALLYDKPDQSKMDLSEYLLSIAHNVENIFSSPDKDIILSTRFEPVMLNSSRSMVCGLILNELLINAYKHAFVKKDSGDIIISLKRTGKDKIVMIVTDDGIG 327          
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Match: A0A2D9FV90_9BACT (Histidine kinase domain-containing protein n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FV90_9BACT)

HSP 1 Score: 213 bits (542), Expect = 1.490e-63
Identity = 98/273 (35.90%), Postives = 177/273 (64.84%), Query Frame = 1
Query:    1 LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDISEDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHASLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLSDASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNIFEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGVISIAIKKDEGDKVLVSVSDNGIG 819
            +SI TGPVKD+I+GM +P++KG+ GWV+   + ++ ND+ ES+ F+ D+S  FTTRN+ICVP+ DS  +A G++QA+N+K  K F  +D+      A H SL+I++ ++ D L+ ++ E++ +L E+H   +NNL  +S  ++   + +SD+  + ++ +T +RI ++A AH +L+    + ++DL  YL ++  ++ NIF    K I  S   + V L +  ++  GLI+ E+++N ++ AF   D+G I I++K+   DKV++ ++D+G+G
Sbjct:   60 ISIPTGPVKDEIRGMTVPKSKGIGGWVISYNQAFISNDVVESDIFWKDLSTGFTTRNIICVPLQDSEGQAFGVLQAINRKNNKPFLNEDVPVFEAFAIHVSLAIQRSKKYDKLEQKVQERNMQLSEIHHRLKNNLAIISGLIEFDLEAISDSMSKEILSATSSRIRSVADAHSLLYDKKDQSKMDLSTYLGYIAHNVENIFSSPQKKITLSTRFEPVQLDSSRSMLCGLIINELLINAYKHAFVKKDRGDIIISLKQTNKDKVVLIITDDGVG 332          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10158.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00146165D32.980e-18898.56GAF domain-containing protein n=1 Tax=Balneola vul... [more]
A0A3D4UUL8_9BACT3.440e-12966.91GAF domain-containing protein n=4 Tax=Balneola sp.... [more]
A0A1B6Y9U5_9BACT3.620e-12464.03GAF domain-containing protein n=1 Tax=Balneola sp.... [more]
A0A3D1GDK5_9BACT1.470e-9652.88GAF domain-containing protein n=1 Tax=Balneolaceae... [more]
A0A3M8G098_9BACT1.770e-9249.64GAF domain-containing protein n=1 Tax=Balneola sp.... [more]
A0A6M1T3S9_9BACT2.250e-7139.42GAF domain-containing protein n=1 Tax=Balneolaceae... [more]
A0A6A8Q5L0_9BACT8.210e-6837.05GAF domain-containing protein n=1 Tax=Balneolaceae... [more]
A0A2D8CJ87_9BACT1.550e-6636.73Histidine kinase domain-containing protein n=1 Tax... [more]
UPI000369A1301.040e-6538.46GAF domain-containing protein n=1 Tax=Gracilimonas... [more]
A0A2D9FV90_9BACT1.490e-6335.90Histidine kinase domain-containing protein n=2 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10158contigC-australica_Contig_10158:3..836 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1121104.AQXH01000009_gene2231
Preferred namepdtaS
PFAMsGAF_2,HATPase_c,HATPase_c_2,H_kinase_N,HisKA_2
Model size834
Max annot lvl2|Bacteria
KEGG koko:K00936
KEGG ModuleM00839
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.28e-189
EggNOG OGsCOG2203@1|root,COG3920@1|root,COG2203@2|Bacteria,COG3920@2|Bacteria
EC2.7.13.3
DescriptionHistidine kinase
Cds size834
COG categoryT
BRITEko00000,ko00002,ko01000,ko01001,ko02022
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586750.485005-CDS-C-australica_Contig_10158:2..8361682586750.485005-CDS-C-australica_Contig_10158:2..836Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10158 3..836 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10158.1.1prot_C-australica_Contig_10158.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10158 3..836 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10158.1.1

>prot_C-australica_Contig_10158.1.1 ID=prot_C-australica_Contig_10158.1.1|Name=mRNA_C-australica_Contig_10158.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=278bp
LSITTGPVKDQIKGMVIPRNKGVAGWVLKNKKPYLVNDMSESEEFYGDIS
EDFTTRNMICVPMFDSNNEAVGIMQALNKKGGKDFNEKDIETLNTLAGHA
SLSIEKVQEVDTLKNEINEKDERLKELHKGFENNLNALSAFVQLQGKMLS
DASVEFMMKSTGARIEAIAQAHEVLFKTDSEQEVDLGFYLSHLTESISNI
FEDFPKDIRYSFDIDKVHLKTDEALTVGLIVTEVILNMFREAFTGMDQGV
ISIAIKKDEGDKVLVSVSDNGIGLSAFL
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mRNA from alignment at C-australica_Contig_10158:3..836+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10158.1.1 ID=mRNA_C-australica_Contig_10158.1.1|Name=mRNA_C-australica_Contig_10158.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=834bp|location=Sequence derived from alignment at C-australica_Contig_10158:3..836+ (Chrysoparadoxa australica CS_1217)
TTAAGTATTACAACCGGACCAGTTAAAGATCAAATTAAAGGCATGGTTAT TCCTCGTAATAAAGGGGTAGCGGGATGGGTACTTAAAAATAAGAAGCCCT ATCTGGTAAATGATATGTCGGAAAGTGAAGAGTTTTACGGAGATATAAGT GAAGACTTTACCACTAGGAATATGATTTGCGTTCCTATGTTCGATTCCAA CAATGAAGCAGTGGGAATCATGCAGGCGTTAAATAAAAAAGGGGGCAAGG ACTTTAATGAGAAAGATATTGAAACCCTTAATACACTTGCTGGGCATGCA TCTCTTTCTATAGAAAAAGTGCAAGAAGTGGATACGCTCAAAAATGAGAT TAATGAAAAAGATGAACGACTAAAAGAGCTCCACAAAGGTTTCGAAAATA ACTTAAATGCCTTAAGTGCTTTTGTGCAATTGCAGGGCAAAATGCTTAGT GATGCTTCCGTTGAATTCATGATGAAATCAACAGGTGCACGCATTGAAGC TATAGCTCAAGCTCATGAAGTGCTGTTCAAAACTGATAGTGAGCAAGAAG TTGACTTAGGTTTTTACTTATCACATCTAACCGAATCGATTTCAAATATA TTTGAAGATTTCCCTAAAGATATTCGATACTCCTTCGATATTGATAAGGT GCATTTGAAAACAGATGAAGCACTAACTGTTGGATTAATTGTAACAGAAG TGATATTGAATATGTTTAGAGAGGCCTTTACCGGTATGGATCAAGGGGTG ATTTCTATCGCCATTAAAAAAGATGAGGGCGATAAAGTATTGGTGAGTGT TTCGGATAACGGAATTGGTTTATCTGCATTCCTT
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Coding sequence (CDS) from alignment at C-australica_Contig_10158:3..836+

>mRNA_C-australica_Contig_10158.1.1 ID=mRNA_C-australica_Contig_10158.1.1|Name=mRNA_C-australica_Contig_10158.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=834bp|location=Sequence derived from alignment at C-australica_Contig_10158:3..836+ (Chrysoparadoxa australica CS_1217)
TTAAGTATTACAACCGGACCAGTTAAAGATCAAATTAAAGGCATGGTTAT
TCCTCGTAATAAAGGGGTAGCGGGATGGGTACTTAAAAATAAGAAGCCCT
ATCTGGTAAATGATATGTCGGAAAGTGAAGAGTTTTACGGAGATATAAGT
GAAGACTTTACCACTAGGAATATGATTTGCGTTCCTATGTTCGATTCCAA
CAATGAAGCAGTGGGAATCATGCAGGCGTTAAATAAAAAAGGGGGCAAGG
ACTTTAATGAGAAAGATATTGAAACCCTTAATACACTTGCTGGGCATGCA
TCTCTTTCTATAGAAAAAGTGCAAGAAGTGGATACGCTCAAAAATGAGAT
TAATGAAAAAGATGAACGACTAAAAGAGCTCCACAAAGGTTTCGAAAATA
ACTTAAATGCCTTAAGTGCTTTTGTGCAATTGCAGGGCAAAATGCTTAGT
GATGCTTCCGTTGAATTCATGATGAAATCAACAGGTGCACGCATTGAAGC
TATAGCTCAAGCTCATGAAGTGCTGTTCAAAACTGATAGTGAGCAAGAAG
TTGACTTAGGTTTTTACTTATCACATCTAACCGAATCGATTTCAAATATA
TTTGAAGATTTCCCTAAAGATATTCGATACTCCTTCGATATTGATAAGGT
GCATTTGAAAACAGATGAAGCACTAACTGTTGGATTAATTGTAACAGAAG
TGATATTGAATATGTTTAGAGAGGCCTTTACCGGTATGGATCAAGGGGTG
ATTTCTATCGCCATTAAAAAAGATGAGGGCGATAAAGTATTGGTGAGTGT
TTCGGATAACGGAATTGGTTTATCTGCATTCCTT
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