prot_C-australica_Contig_101.2.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_101.2.1
Unique Nameprot_C-australica_Contig_101.2.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length289
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_101.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.340.70coord: 214..288
e-value: 2.1E-6
score: 29.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..84
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 234..287
e-value: 7.7E-7
score: 29.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_101contigC-australica_Contig_101:703..2408 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_101.2.1mRNA_C-australica_Contig_101.2.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_101 703..2523 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_101.2.1 ID=prot_C-australica_Contig_101.2.1|Name=mRNA_C-australica_Contig_101.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=289bp
MAPGLPDLLYKMETGDSHALALPPPAYGAASGKHEKPQSTQPHASPATGQ
GKEGDSSVAFDGLPGSVAPLPRGGPAPVPSGFEHAELASQLASLPLEAQG
KGKATGENFGKVLTAPTPMAGSSSSTSRAKKSRHVEFGPVYTTENSNFQK
PGHSRYFLFDEVYDYHTQGWYPARLKGVGSPAGKRRDFRVTASKYSVIQG
TFFTFILGRHGRVPSEPSETHRSPRSTVKILPRKDEIPKILEQYHNHTHS
GINKARELLSRSYKIEDFDRFYSETKQKCAQCNQSKDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041588Integrase_H2C2