mRNA_C-australica_Contig_10046.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10046.1.1
Unique NamemRNA_C-australica_Contig_10046.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10046.1.1 vs. uniprot
Match: A0A2E9AM71_9GAMM (ADP-L-glycero-D-manno-heptose-6-epimerase n=2 Tax=Salinisphaera TaxID=180541 RepID=A0A2E9AM71_9GAMM)

HSP 1 Score: 439 bits (1129), Expect = 3.130e-153
Identity = 212/277 (76.53%), Postives = 232/277 (83.75%), Query Frame = 1
Query:    1 MLVVTGGAGFIGSNLVAGLNERGRRDIAVVDDLRDGRKSLNLADLDFADYFEFDDFEARLLAGEDLG-IEAVFHQGACSDTTEWDGRYVMANNYRYSVNLLDYCQARGIPFIYASSASVYGAGPTFTEDRAHERPLNMYAFSKFAFDQHVRSRQGAFKSQVAGLRYFNVYGPREQHKGKMASVAWHFNNQIAADGECRLFAGSDGYGDGEQRRDFVYVGDCVAVNLWLWESGTAGIYNCGTGRCQPFNDVADAVIAWRGAGSKRYIPFPDELKRRYQ 828
            M++VTG AGFIGSN+VAGLN RG RDI +VDD+ DG+K LNLADLDF+DY E+DD  AR+ AGEDLG I AVFHQGACSDTTEWDGRYVMA NYRYS +L D+C AR IPFIYASSASVYG GP F E R  ERPLNMYAFSKFAFDQ+VR++     SQVAGLRYFNVYGPREQHKGKMASVAWHF+ QI A+GECRLF GS+GY DGEQRRDFVYVGDCV VNLWL +SG +GI+NCGTGR Q FNDVADAVIAW G G KRYI FP  L  RYQ
Sbjct:    1 MIIVTGAAGFIGSNIVAGLNARGERDILIVDDMSDGQKCLNLADLDFSDYLEYDDLLARVEAGEDLGEIRAVFHQGACSDTTEWDGRYVMARNYRYSKSLHDWCVARSIPFIYASSASVYGMGPDFVEQRDAERPLNMYAFSKFAFDQYVRAQSATTGSQVAGLRYFNVYGPREQHKGKMASVAWHFSRQIEAEGECRLFEGSEGYDDGEQRRDFVYVGDCVDVNLWLLDSGVSGIFNCGTGRSQTFNDVADAVIAWYGRGEKRYIEFPQSLVGRYQ 277          
BLAST of mRNA_C-australica_Contig_10046.1.1 vs. uniprot
Match: A0A2E0IZZ2_9GAMM (ADP-L-glycero-D-manno-heptose-6-epimerase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2E0IZZ2_9GAMM)

HSP 1 Score: 438 bits (1126), Expect = 8.650e-153
Identity = 212/277 (76.53%), Postives = 230/277 (83.03%), Query Frame = 1
Query:    1 MLVVTGGAGFIGSNLVAGLNERGRRDIAVVDDLRDGRKSLNLADLDFADYFEFDDFEARLLAGEDLG-IEAVFHQGACSDTTEWDGRYVMANNYRYSVNLLDYCQARGIPFIYASSASVYGAGPTFTEDRAHERPLNMYAFSKFAFDQHVRSRQGAFKSQVAGLRYFNVYGPREQHKGKMASVAWHFNNQIAADGECRLFAGSDGYGDGEQRRDFVYVGDCVAVNLWLWESGTAGIYNCGTGRCQPFNDVADAVIAWRGAGSKRYIPFPDELKRRYQ 828
            M++VTG AGFIGSN+VAGLN RG RDI VVDDL DGRK LNLADLDF+DY E+DD  AR+ +G DLG + AVFHQGACSDTTEWDGRYVM  NYRYS +L D+C ARGIPFIYASSASVYG GP F E RA ERPLNMYAFSKFAFDQ+VR++     SQVAGLRYFNVYGPREQHKGKMASVAWHF+ QI   G+CRLF GSDGYGDGEQRRDFVYVGDCV VNLWL +SG +GI+NCGTGR Q FNDVADAV AW G G KRYI FP  L  RYQ
Sbjct:    1 MIIVTGAAGFIGSNIVAGLNARGERDILVVDDLADGRKCLNLADLDFSDYLEYDDLLARIESGADLGDVTAVFHQGACSDTTEWDGRYVMDRNYRYSKSLHDWCVARGIPFIYASSASVYGMGPDFVEQRAAERPLNMYAFSKFAFDQYVRAQSAKVNSQVAGLRYFNVYGPREQHKGKMASVAWHFSRQIEDSGDCRLFEGSDGYGDGEQRRDFVYVGDCVDVNLWLLDSGVSGIFNCGTGRSQTFNDVADAVTAWYGRGGKRYIEFPASLIGRYQ 277          
BLAST of mRNA_C-australica_Contig_10046.1.1 vs. uniprot
Match: A0A423PUC1_9GAMM (ADP-L-glycero-D-manno-heptose-6-epimerase n=2 Tax=Salinisphaera TaxID=180541 RepID=A0A423PUC1_9GAMM)

HSP 1 Score: 424 bits (1090), Expect = 2.180e-147
Identity = 205/278 (73.74%), Postives = 235/278 (84.53%), Query Frame = 1
Query:    1 MLVVTGGAGFIGSNLVAGLNERGRRDIAVVDDLRDGRKSLNLADLDFADYFEFDDFEARLLAGEDLG-IEAVFHQGACSDTTEWDGRYVMANNYRYSVNLLDYCQARGIPFIYASSASVYGAGPTFTEDRAHERPLNMYAFSKFAFDQHVRSRQGAFKSQVAGLRYFNVYGPREQHKGKMASVAWHFNNQIAADGECRLFAGSDGYGDGEQRRDFVYVGDCVAVNLWLWES-GTAGIYNCGTGRCQPFNDVADAVIAWRGAGSKRYIPFPDELKRRYQ 828
            M++VTG AGFIGSNLVAGLN RGR DI +VDDL DGRK LNLADLDFADY E+DD  AR+  G+ LG I+AVFHQGACS TTEWDGRY+MA NYRYS +L D+C ARG+PF+YASSASVYG GP F E R+ ERPLNMYAFSKFAFDQ+VR+  G  +SQVAGLRYFNVYGPREQHK  MASVA HF+ QIAA+GECRLF G++GYGDGEQRRDF++V DCVAVNLWL ++ G +GI+NCGTGR Q FN+VADAVIAW G G++RYIPFP+ L  RYQ
Sbjct:    1 MIIVTGAAGFIGSNLVAGLNARGRSDILLVDDLADGRKCLNLADLDFADYLEYDDLLARVERGDALGDIDAVFHQGACSATTEWDGRYMMARNYRYSKSLHDWCAARGVPFLYASSASVYGMGPHFVEQRSAERPLNMYAFSKFAFDQYVRANAGRVESQVAGLRYFNVYGPREQHKDGMASVARHFSRQIAAEGECRLFEGAEGYGDGEQRRDFIHVDDCVAVNLWLLDNPGVSGIFNCGTGRSQTFNEVADAVIAWHGRGARRYIPFPESLVGRYQ 278          
BLAST of mRNA_C-australica_Contig_10046.1.1 vs. uniprot
Match: A0A2D4S8K1_9GAMM (ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4S8K1_9GAMM)

HSP 1 Score: 414 bits (1063), Expect = 2.700e-143
Identity = 207/279 (74.19%), Postives = 229/279 (82.08%), Query Frame = 1
Query:    1 MLVVTGGAGFIGSNLVAGLNERGRRDIAVVDDLRDGRKSLNLADLDFADYFEFDDFEARLL-AGEDLGIEAVFHQGACSDTTEWDGRYVMANNYRYSVNLLDYCQARGIPFIYASSASVYGAGPTFTEDRAHERPLNMYAFSKFAFDQHVR-SRQGAFKSQVAGLRYFNVYGPREQHKGKMASVAWHFNNQIAADGECRLFAGSDGYGDGEQRRDFVYVGDCVAVNLWLWES-GTAGIYNCGTGRCQPFNDVADAVIAWRGAGSKRYIPFPDELKRRYQ 828
            M+VVTG AGFIGSN+VAGLN RGR DI VVDDLRDGRK LNLADLDFADY E+D+F A L    +   IEAVFHQGACSDTTEWDGRYVM NNYRYS +LL+YC AR IPFIYASSASVYG G  F E+R HERPLNMYAFSKFAFDQ+VR S +    +QVAGLRYFNVYGPRE HKGKM+SVA+HF+NQI   GECRLF GSDGY DG QRRDFVYV D V VNLWL+++   +GI+NCGTGR Q F+DVADAVIAW G G KR+IPFP+EL  RYQ
Sbjct:    1 MIVVTGAAGFIGSNIVAGLNARGRTDILVVDDLRDGRKCLNLADLDFADYMEYDEFLACLGDVSQPWVIEAVFHQGACSDTTEWDGRYVMENNYRYSRSLLEYCAAREIPFIYASSASVYGGGEIFVEERRHERPLNMYAFSKFAFDQYVRASHERLAHTQVAGLRYFNVYGPRESHKGKMSSVAYHFHNQIGESGECRLFEGSDGYPDGGQRRDFVYVKDVVEVNLWLFDNPSVSGIFNCGTGRSQTFSDVADAVIAWHGRGEKRFIPFPEELVGRYQ 279          
BLAST of mRNA_C-australica_Contig_10046.1.1 vs. uniprot
Match: A0A084IKX2_SALHC (ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Salinisphaera hydrothermalis (strain C41B8) TaxID=1304275 RepID=A0A084IKX2_SALHC)

HSP 1 Score: 400 bits (1028), Expect = 5.690e-138
Identity = 198/279 (70.97%), Postives = 225/279 (80.65%), Query Frame = 1
Query:    1 MLVVTGGAGFIGSNLVAGLNERGRRDIAVVDDLRDGRKSLNLADLDFADYFEFDDFEARLLAGEDL--GIEAVFHQGACSDTTEWDGRYVMANNYRYSVNLLDYCQARGIPFIYASSASVYGAGPTFTEDRAHERPLNMYAFSKFAFDQHVRSRQGAFKSQVAGLRYFNVYGPREQHKGKMASVAWHFNNQIAADGECRLFAGSDGYGDGEQRRDFVYVGDCVAVNLWLWESG-TAGIYNCGTGRCQPFNDVADAVIAWRGAGSKRYIPFPDELKRRYQ 828
            M++VTG AGFIGSN+VAGLN RG RDI +VDDL DG K LNLADLDFADY E+D+ E R+ A +D+  GI+AVFH+GACSDTTEWDGRYVMA N+ YS  L  +CQ   + F+YASSASVYG GP F E R  E+PLNMYAFSKFAFDQ+VR++  A +SQV GLRYFNVYGPRE HKG+MASVA HF+NQIA DGECRLFAGSDGYG GEQRRDF++V D VAVNLWL ++   +GIYNCGTGR Q FNDVADAVIAW G G KRYI FP  L  RYQ
Sbjct:    1 MIIVTGAAGFIGSNIVAGLNARGVRDILIVDDLADGHKCLNLADLDFADYLEYDELERRM-AADDMPGGIDAVFHEGACSDTTEWDGRYVMARNFTYSKTLHAWCQRHRVAFLYASSASVYGMGPDFVERRNAEKPLNMYAFSKFAFDQYVRAQGRARRSQVVGLRYFNVYGPREGHKGRMASVARHFSNQIAEDGECRLFAGSDGYGSGEQRRDFIHVDDVVAVNLWLLDNPQVSGIYNCGTGRSQTFNDVADAVIAWHGRGEKRYIDFPKSLVGRYQ 278          
BLAST of mRNA_C-australica_Contig_10046.1.1 vs. uniprot
Match: A0A2Z3J9P6_9GAMM (ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Salinisphaera sp. LB1 TaxID=2183911 RepID=A0A2Z3J9P6_9GAMM)

HSP 1 Score: 394 bits (1012), Expect = 1.490e-135
Identity = 195/279 (69.89%), Postives = 220/279 (78.85%), Query Frame = 1
Query:    1 MLVVTGGAGFIGSNLVAGLNERGRRDIAVVDDLRDGRKSLNLADLDFADYFEFDDFEARLLAGEDL--GIEAVFHQGACSDTTEWDGRYVMANNYRYSVNLLDYCQARGIPFIYASSASVYGAGPTFTEDRAHERPLNMYAFSKFAFDQHVRSRQGAFKSQVAGLRYFNVYGPREQHKGKMASVAWHFNNQIAADGECRLFAGSDGYGDGEQRRDFVYVGDCVAVNLWLWESG-TAGIYNCGTGRCQPFNDVADAVIAWRGAGSKRYIPFPDELKRRYQ 828
            M++VTG AGFIGSN+VAGLN RG RDI VVDDL DG K LNLADLDF+DY E+D+ E R+ A +D+  G++AVFHQGACSDTTEWDGRYVMA N+ YS  L  +C    +PF+YASSASVYG GP F E RA E PLNMYA SKFAFDQ+VR+R     SQV GLRYFNVYGPRE HKG+MASVA HF+NQI  DGECRLFAGSDGYGDGEQRRDF++V D VAVNLWL +    +GI+NCGTGR Q FN+VADAVIAW G G KRYI FP  L   YQ
Sbjct:    1 MIIVTGAAGFIGSNIVAGLNARGIRDILVVDDLTDGHKCLNLADLDFSDYLEYDELERRM-AADDMPRGVDAVFHQGACSDTTEWDGRYVMARNFTYSKTLHAWCAQHRVPFLYASSASVYGMGPDFVERRAAESPLNMYAVSKFAFDQYVRARAKTRHSQVVGLRYFNVYGPREGHKGRMASVARHFSNQIVEDGECRLFAGSDGYGDGEQRRDFIHVDDVVAVNLWLLDHPQVSGIFNCGTGRSQTFNEVADAVIAWHGRGEKRYIQFPQSLLGHYQ 278          
BLAST of mRNA_C-australica_Contig_10046.1.1 vs. uniprot
Match: A0A3M1WUX4_9GAMM (ADP-L-glycero-D-manno-heptose-6-epimerase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A3M1WUX4_9GAMM)

HSP 1 Score: 387 bits (993), Expect = 1.190e-132
Identity = 187/280 (66.79%), Postives = 215/280 (76.79%), Query Frame = 1
Query:    1 MLVVTGGAGFIGSNLVAGLNERGRRDIAVVDDLRDGRKSLNLADLDFADYFEFDDFEARLLAGEDLG---IEAVFHQGACSDTTEWDGRYVMANNYRYSVNLLDYCQARGIPFIYASSASVYGAGPTFTEDRAHERPLNMYAFSKFAFDQHVRSRQGAFKSQVAGLRYFNVYGPREQHKGKMASVAWHFNNQIAADGECRLFAGSDGYGDGEQRRDFVYVGDCVAVNLWLWES-GTAGIYNCGTGRCQPFNDVADAVIAWRGAGSKRYIPFPDELKRRYQ 828
            M++VTGGAGFIGSN+V  LN+RG RDI VVDDL DG K  N+ADLD ADY + D F   + +G D G   + AVFH+GACS TTEW+G+++M NNY YS  LL +C  R +PF+YASSASVYG GP F EDRA+ERPLN+Y +SKF FDQ+VR      +SQV G RYFNVYGPREQHKG MASVA+HFNNQI   G+CRLF GSDGY DGEQ+RDFVYVGDCVAVNLW  +    +GI+N GTGR Q FNDVADAVIAW G G K YIPFPD LK RYQ
Sbjct:    1 MIIVTGGAGFIGSNIVKALNDRGERDILVVDDLEDGTKFRNIADLDIADYLDKDAFRELIRSGLDTGWGEVRAVFHEGACSATTEWNGKFMMDNNYAYSKELLHWCLDRQVPFLYASSASVYGMGPKFIEDRAYERPLNVYGYSKFQFDQYVRRLLPQAESQVVGFRYFNVYGPREQHKGSMASVAFHFNNQIREQGKCRLFEGSDGYADGEQQRDFVYVGDCVAVNLWFMDHPDKSGIFNLGTGRAQSFNDVADAVIAWHGRGEKEYIPFPDHLKGRYQ 280          
BLAST of mRNA_C-australica_Contig_10046.1.1 vs. uniprot
Match: A0A3A5J6Z5_9GAMM (ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Salinisphaera sp. Q1T1-3 TaxID=2321229 RepID=A0A3A5J6Z5_9GAMM)

HSP 1 Score: 386 bits (992), Expect = 1.530e-132
Identity = 194/278 (69.78%), Postives = 217/278 (78.06%), Query Frame = 1
Query:    1 MLVVTGGAGFIGSNLVAGLNERGRRDIAVVDDLRDGRKSLNLADLDFADYFEFDDFEARLLAGEDLG-IEAVFHQGACSDTTEWDGRYVMANNYRYSVNLLDYCQARGIPFIYASSASVYGAGPTFTEDRAHERPLNMYAFSKFAFDQHVRSRQGAFKSQVAGLRYFNVYGPREQHKGKMASVAWHFNNQIAADGECRLFAGSDGYGDGEQRRDFVYVGDCVAVNLWLWESG-TAGIYNCGTGRCQPFNDVADAVIAWRGAGSKRYIPFPDELKRRYQ 828
            M++VTG AGFIGSNLVAGLN RG  DI  VDD  DG K +NLADLDF DY E+DD  AR+ AGE  G I+A+FHQGACSDTTEWDGRYVMA N+ YS  L  +    G+PFIYASSASVYG GP F E R+ ERPLNMYAFSKFAFDQ+VR+R  +  S VAGLRYFNVYGPRE HKGKMASVA HF+ QIA  GECRLF GS GYGDGEQRRDF++V D VAVNLWL ++   +G++NCGTGR Q FN+VADAVIAW G G KRYI FPD L   YQ
Sbjct:    1 MIIVTGAAGFIGSNLVAGLNARGITDIMAVDDFADGHKCINLADLDFFDYLEYDDLAARMDAGEYFGDIDAIFHQGACSDTTEWDGRYVMARNFTYSKCLHRWAGVHGVPFIYASSASVYGMGPQFIESRSAERPLNMYAFSKFAFDQYVRARPSS--SPVAGLRYFNVYGPREGHKGKMASVARHFSAQIAETGECRLFRGSHGYGDGEQRRDFIHVDDVVAVNLWLLDNPHVSGVFNCGTGRSQTFNEVADAVIAWHGRGEKRYIDFPDSLVGAYQ 276          
BLAST of mRNA_C-australica_Contig_10046.1.1 vs. uniprot
Match: A0A1A6C4Y8_9GAMM (ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Acidihalobacter prosperus TaxID=160660 RepID=A0A1A6C4Y8_9GAMM)

HSP 1 Score: 382 bits (980), Expect = 9.850e-131
Identity = 184/277 (66.43%), Postives = 208/277 (75.09%), Query Frame = 1
Query:    1 MLVVTGGAGFIGSNLVAGLNERGRRDIAVVDDLRDGRKSLNLADLDFADYFEFDDFEARLLAGEDLGIEAVFHQGACSDTTEWDGRYVMANNYRYSVNLLDYCQARGIPFIYASSASVYGAGPTFTEDRAHERPLNMYAFSKFAFDQHVRSRQGAFKSQVAGLRYFNVYGPREQHKGKMASVAWHFNNQIAADGECRLFAGSDGYGDGEQRRDFVYVGDCVAVNLWLWES-GTAGIYNCGTGRCQPFNDVADAVIAWRGAGSKRYIPFPDELKRRYQ 828
            M++VTGGAGFIGSN+V  LN RG  DI VVDDL DG K +NLADL  ADY + DDF  R+ AGED G  A+FH+GACS TTEWDGR++M NNY YS  LL YC  RG+ F+YASSASVYGAGP F E    ERPLN+Y +SKF FDQ+VR      +SQ+AG RYFNVYGPREQHKG MASVA+H NNQ+   G CRLF G+DGYGDGEQ RDFVYVGDC  VNLW  +    +GI+N GTGR Q FNDVA AVIAW G G  +YIPFPD LK RYQ
Sbjct:    1 MIIVTGGAGFIGSNIVQRLNARGETDILVVDDLTDGTKFVNLADLQIADYLDKDDFIVRVRAGEDFGARAIFHEGACSATTEWDGRFMMENNYAYSKTLLHYCLDRGVAFLYASSASVYGAGPDFVERLDCERPLNVYGYSKFQFDQYVRRLLPGARSQIAGFRYFNVYGPREQHKGSMASVAFHLNNQLLESGRCRLFEGTDGYGDGEQSRDFVYVGDCADVNLWFLDHPDVSGIFNLGTGRAQTFNDVARAVIAWHGKGDLQYIPFPDHLKGRYQ 277          
BLAST of mRNA_C-australica_Contig_10046.1.1 vs. uniprot
Match: A0A1P8UG13_9GAMM (ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=Acidihalobacter ferrooxydans TaxID=1765967 RepID=A0A1P8UG13_9GAMM)

HSP 1 Score: 380 bits (977), Expect = 2.720e-130
Identity = 181/277 (65.34%), Postives = 211/277 (76.17%), Query Frame = 1
Query:    1 MLVVTGGAGFIGSNLVAGLNERGRRDIAVVDDLRDGRKSLNLADLDFADYFEFDDFEARLLAGEDLGIEAVFHQGACSDTTEWDGRYVMANNYRYSVNLLDYCQARGIPFIYASSASVYGAGPTFTEDRAHERPLNMYAFSKFAFDQHVRSRQGAFKSQVAGLRYFNVYGPREQHKGKMASVAWHFNNQIAADGECRLFAGSDGYGDGEQRRDFVYVGDCVAVNLWLWESG-TAGIYNCGTGRCQPFNDVADAVIAWRGAGSKRYIPFPDELKRRYQ 828
            M++VTGGAGFIG+N+V  LN RG  DI VVDDL DG K +N+ADL  ADY + DDF AR+ AG D G +A+FH+GACS TTE DGRY+M NN+ YS  LL YC   G  ++YASSASVYGAGP FTE   HE+PLN+Y +SKF FDQ+VR      +SQVAG RYFNVYGPREQHKG MASVA+HFNNQI  DG CRLF G+DGY +G Q+RDFVYVGDCVAVNLW  +    +GI+N GTGR Q FNDVA AVI W GAG  +Y+PFP+ LK RYQ
Sbjct:    1 MIIVTGGAGFIGANIVQALNGRGETDILVVDDLEDGTKFVNIADLQIADYMDKDDFLARVEAGRDFGAQAIFHEGACSATTEGDGRYMMRNNFEYSKTLLHYCLDHGTQYLYASSASVYGAGPVFTEGLEHEKPLNVYGYSKFQFDQYVRRLSAQARSQVAGFRYFNVYGPREQHKGSMASVAFHFNNQIKTDGRCRLFEGTDGYANGGQQRDFVYVGDCVAVNLWFLDHPEVSGIFNLGTGRAQTFNDVASAVIDWHGAGEIKYVPFPEHLKGRYQ 277          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10046.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E9AM71_9GAMM3.130e-15376.53ADP-L-glycero-D-manno-heptose-6-epimerase n=2 Tax=... [more]
A0A2E0IZZ2_9GAMM8.650e-15376.53ADP-L-glycero-D-manno-heptose-6-epimerase n=2 Tax=... [more]
A0A423PUC1_9GAMM2.180e-14773.74ADP-L-glycero-D-manno-heptose-6-epimerase n=2 Tax=... [more]
A0A2D4S8K1_9GAMM2.700e-14374.19ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=... [more]
A0A084IKX2_SALHC5.690e-13870.97ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=... [more]
A0A2Z3J9P6_9GAMM1.490e-13569.89ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=... [more]
A0A3M1WUX4_9GAMM1.190e-13266.79ADP-L-glycero-D-manno-heptose-6-epimerase n=2 Tax=... [more]
A0A3A5J6Z5_9GAMM1.530e-13269.78ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=... [more]
A0A1A6C4Y8_9GAMM9.850e-13166.43ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=... [more]
A0A1P8UG13_9GAMM2.720e-13065.34ADP-L-glycero-D-manno-heptose-6-epimerase n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10046contigC-australica_Contig_10046:14..841 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1033802.SSPSH_002782
Preferred namehldD
PFAMsEpimerase
Model size828
Max annot lvl1236|Gammaproteobacteria
KEGG rclassRC01291
KEGG koko:K03274
KEGG ReactionR05176
KEGG Pathwayko00540,ko01100,map00540,map01100
KEGG ModuleM00064
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008712,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033692,GO:0034637,GO:0034645,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0048037,GO:0050661,GO:0050662,GO:0070401,GO:0071704,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901576,GO:1903509
Exons1
Evalue1.47e-153
EggNOG OGsCOG0451@1|root,COG0451@2|Bacteria,1MVE4@1224|Proteobacteria,1RP2S@1236|Gammaproteobacteria
EC5.1.3.20
DescriptionCatalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose
Cds size828
COG categoryGM
BiGG ReactioniPC815.YPO0058,iYL1228.KPN_03963
BRITEko00000,ko00001,ko00002,ko01000,ko01005
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586739.181652-CDS-C-australica_Contig_10046:13..8411682586739.181652-CDS-C-australica_Contig_10046:13..841Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10046 14..841 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10046.1.1prot_C-australica_Contig_10046.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10046 14..841 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10046.1.1

>prot_C-australica_Contig_10046.1.1 ID=prot_C-australica_Contig_10046.1.1|Name=mRNA_C-australica_Contig_10046.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=276bp
MLVVTGGAGFIGSNLVAGLNERGRRDIAVVDDLRDGRKSLNLADLDFADY
FEFDDFEARLLAGEDLGIEAVFHQGACSDTTEWDGRYVMANNYRYSVNLL
DYCQARGIPFIYASSASVYGAGPTFTEDRAHERPLNMYAFSKFAFDQHVR
SRQGAFKSQVAGLRYFNVYGPREQHKGKMASVAWHFNNQIAADGECRLFA
GSDGYGDGEQRRDFVYVGDCVAVNLWLWESGTAGIYNCGTGRCQPFNDVA
DAVIAWRGAGSKRYIPFPDELKRRYQ
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mRNA from alignment at C-australica_Contig_10046:14..841+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10046.1.1 ID=mRNA_C-australica_Contig_10046.1.1|Name=mRNA_C-australica_Contig_10046.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10046:14..841+ (Chrysoparadoxa australica CS_1217)
ATGCTAGTAGTCACCGGCGGCGCCGGCTTCATCGGCAGCAATCTGGTGGC CGGCCTGAATGAGCGGGGTCGTCGTGACATCGCGGTGGTGGATGACCTGC GCGACGGCCGCAAATCCCTGAATCTGGCCGATCTCGACTTTGCGGATTAC TTCGAATTCGACGATTTCGAGGCCCGGCTGCTAGCCGGCGAGGACCTCGG TATCGAGGCGGTATTTCACCAGGGCGCCTGCTCCGACACCACCGAGTGGG ATGGCCGTTACGTGATGGCCAACAACTACCGCTATTCGGTCAATTTGCTG GACTACTGCCAGGCGCGGGGCATTCCGTTCATCTACGCCTCCTCGGCCTC GGTCTACGGCGCCGGCCCGACATTCACGGAAGACCGCGCCCACGAACGTC CGCTGAACATGTACGCGTTTTCCAAGTTCGCTTTCGATCAGCACGTACGC AGCCGGCAGGGGGCGTTCAAGAGCCAGGTGGCCGGCCTGCGCTACTTCAA CGTCTACGGCCCCCGCGAGCAGCACAAGGGCAAGATGGCCAGTGTCGCCT GGCACTTCAACAACCAGATTGCCGCCGACGGCGAATGCCGGCTGTTTGCC GGGTCGGATGGTTACGGCGACGGCGAGCAGCGGCGTGATTTCGTCTACGT CGGCGACTGCGTGGCGGTGAATCTCTGGCTGTGGGAATCCGGCACGGCCG GCATTTACAACTGCGGCACCGGCCGTTGCCAGCCCTTCAACGATGTGGCC GATGCGGTGATCGCCTGGCGGGGTGCGGGCAGCAAGCGCTACATCCCCTT TCCGGACGAACTAAAGCGACGTTACCAG
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Coding sequence (CDS) from alignment at C-australica_Contig_10046:14..841+

>mRNA_C-australica_Contig_10046.1.1 ID=mRNA_C-australica_Contig_10046.1.1|Name=mRNA_C-australica_Contig_10046.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10046:14..841+ (Chrysoparadoxa australica CS_1217)
ATGCTAGTAGTCACCGGCGGCGCCGGCTTCATCGGCAGCAATCTGGTGGC
CGGCCTGAATGAGCGGGGTCGTCGTGACATCGCGGTGGTGGATGACCTGC
GCGACGGCCGCAAATCCCTGAATCTGGCCGATCTCGACTTTGCGGATTAC
TTCGAATTCGACGATTTCGAGGCCCGGCTGCTAGCCGGCGAGGACCTCGG
TATCGAGGCGGTATTTCACCAGGGCGCCTGCTCCGACACCACCGAGTGGG
ATGGCCGTTACGTGATGGCCAACAACTACCGCTATTCGGTCAATTTGCTG
GACTACTGCCAGGCGCGGGGCATTCCGTTCATCTACGCCTCCTCGGCCTC
GGTCTACGGCGCCGGCCCGACATTCACGGAAGACCGCGCCCACGAACGTC
CGCTGAACATGTACGCGTTTTCCAAGTTCGCTTTCGATCAGCACGTACGC
AGCCGGCAGGGGGCGTTCAAGAGCCAGGTGGCCGGCCTGCGCTACTTCAA
CGTCTACGGCCCCCGCGAGCAGCACAAGGGCAAGATGGCCAGTGTCGCCT
GGCACTTCAACAACCAGATTGCCGCCGACGGCGAATGCCGGCTGTTTGCC
GGGTCGGATGGTTACGGCGACGGCGAGCAGCGGCGTGATTTCGTCTACGT
CGGCGACTGCGTGGCGGTGAATCTCTGGCTGTGGGAATCCGGCACGGCCG
GCATTTACAACTGCGGCACCGGCCGTTGCCAGCCCTTCAACGATGTGGCC
GATGCGGTGATCGCCTGGCGGGGTGCGGGCAGCAAGCGCTACATCCCCTT
TCCGGACGAACTAAAGCGACGTTACCAG
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