prot_C-australica_Contig_97.6.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_97.6.1
Unique Nameprot_C-australica_Contig_97.6.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length1336
Homology
BLAST of mRNA_C-australica_Contig_97.6.1 vs. uniprot
Match: D7FI79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI79_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 8.070e-32
Identity = 168/552 (30.43%), Postives = 228/552 (41.30%), Query Frame = 0
Query:  352 EALVEALMKRGFSKNGVIRAARATRNASLDVALAWCFAHCGDKDFDAPL--------PPPS--SRRRDERVQGRERHEGEQGRDPAAVAALAVSGVAALEALAIAGKDIQTAVGNGVEAWELLQAAADASLPTAQAAMGAESIRLAGLSAHLPAPVLTVLEKHQANAASDEETRRLRAVLPG-VDSQRLTSDPAYVEE-----ALAQTVAASEDWSVLEAALEVAGADRAWGLVRGRLSSWLGEGWAERRA-GSDEATVCAGADAALRGVGGGQLLHIL-----------------RRDPAAVLQELRVFYGMAGGEEMGRLELLLRMASDVA-------------------EAPTTKRLQAHVGLLKRLLRIKLSGLDYKRLMGEDPFADPAV------------------------------------------TGGPLEEVQEAARSELRAVITRECLPTLSKLASRIHGLHASDIFLAYAHRVICGTASDLSEETQSLLRGE--GASAPVNDVAAASASVHHLLMEVMPKLAPGDKEQLLRAVMLPHS 806
            E LV+AL KRG S N   RA  AT+NAS + ALAWC  H  D   DAP          P S  S R+   V G     G  GR  AA+ +   +  AALEA   A    + AV NG                  + A+ A    +  L A     V+T   + Q+   ++E+ R    VLP  VD  R   DP Y +      ALA+    ++ W V  AA                 +  LG G+ + R+ G   +   +  +  LR  G G                       R+D   V+++L  F G A G ++  L+LLLR+  + A                   + P  +RL AH+GL++RLL+    GLDYK L+G+DP ADP                                            T   L   +  A +ELR+V   E    LSKLA+RI G+  S ++LA A RV+CG A  LS E   LLRG     S    +  A SASV+HLL  ++PK+A  D  +L  AV  PH+
Sbjct: 2085 EVLVQALGKRGISSNRARRACVATQNASREAALAWCVEHSADPAMDAPFVSSRRAPQAPTSGGSGRQASEVDGGSGSSGGDGRMRAAMRSRDRA-AAALEAYVRA----RLAVVNGGTXXXXXXX----XXXXVEGALPAVEEEIEELLA-----VITSFRQRQSLGLAEEKAR---GVLPATVDLGRFAGDPRYRQGPRGVIALAREYPDTDVWRVAAAA----------------TTGLLGRGYGKLRSKGVAASAAISRVETELRNSGAGXXXXXXXXXXXXXXXXXXXXXRGRQDALQVVRDL--FVGAADGADLHHLDLLLRLMYEAAARSGPSGGAEAGGGVGGGAKNPIERRLNAHIGLMRRLLKAAPPGLDYKALIGDDPLADPLADPEAGGGAPDAAAAFAGNSLAPXXXXXXXXXXXXXXXXXXXXTAAGLAAARARAMAELRSVAGLEHAAALSKLAARIPGMSVSAVYLAVAQRVLCGEAGGLSPEDMDLLRGALITDSGEEEEAEALSASVYHLLSPLLPKMAADDLVELAAAVCAPHA 2601          
BLAST of mRNA_C-australica_Contig_97.6.1 vs. uniprot
Match: A0A6H5JKW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW6_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 4.030e-22
Identity = 85/247 (34.41%), Postives = 116/247 (46.96%), Query Frame = 0
Query:  621 LQELR-VFYGMAGGEEMGRLELLLRMASDV-------------------AEAPTTKRLQAHVGLLKRLLRIKLSGLDYKRLMGEDPFADPAV---------------------------------------TGGPLEEVQEAARSELRAVITRECLPTLSKLASRIHGLHASDIFLAYAHRVICGTASDLSEETQSLLRGE--GASAPVNDVAAASASVHHLLMEVMPKLAPGDKEQLLRAVMLPHS 806
            LQ +R VF G AGG+++  L+LLLR+ S+                    A+ P  +RL AH+GL++RLL+    GLDYK L+G+DP AD                                          T   L   +  A +E+R+V   E +  LSKLA+RI G+  S ++LA A RV+CG    LS E   LLRG     S    +  A SASV+HLL  ++PK+A  D   L  AV  PH+
Sbjct: 1154 LQVVRDVFVGAAGGDDLHHLDLLLRLMSEASARSGPSGGAEAGGAIGGGAKNPIERRLNAHIGLMRRLLKAAPPGLDYKALIGDDPLADXXXXXXXGXXXXXXXXGNSSAPSSNDSTSTRSGAGGAAATQRTAAGLAAARARAMAEVRSVAGLEHVAVLSKLAARIPGMSVSAVYLAVAQRVLCGETGGLSPEDMDLLRGALITGSGEEEEAEALSASVYHLLSPLLPKMAAHDLVDLAAAVCAPHA 1400          
BLAST of mRNA_C-australica_Contig_97.6.1 vs. uniprot
Match: F0Y1Z5_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1Z5_AURAN)

HSP 1 Score: 65.1 bits (157), Expect = 1.250e-6
Identity = 31/55 (56.36%), Postives = 34/55 (61.82%), Query Frame = 0
Query:  348 VVASEALVEALMKRGFSKNGVIRAARATRNASLDVALAWCFAHCGDKDFDAPLPP 402
            V   EALV  L+  GF ++G  RA RAT NA LD ALAWC  H GD DF AP  P
Sbjct: 1448 VAPDEALVAELVALGFVEHGARRACRATANADLDTALAWCVGHAGDADFAAPPAP 1502          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_97.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FI79_ECTSI8.070e-3230.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JKW6_9PHAE4.030e-2234.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F0Y1Z5_AURAN1.250e-656.36Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.10coord: 352..396
e-value: 1.4E-10
score: 42.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..349
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 398..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..329
NoneNo IPR availablePANTHERPTHR15922NEUROBLASTOMA-AMPLIFIED SEQUENCEcoord: 512..750
coord: 96..314
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 345..405

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_97contigC-australica_Contig_97:24098..33037 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_97.6.1mRNA_C-australica_Contig_97.6.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_97 23870..33291 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_97.6.1 ID=prot_C-australica_Contig_97.6.1|Name=mRNA_C-australica_Contig_97.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=1336bp
MGDMNCDAVPLQLRLKLEKSGPVAVVTELLAAEPYLYLHGWVASPKKRSS
RRISGALSFASDSSQQETEHLVEARQLHEEVLLNREGMIKTPPGTSVLRL
SQLLGAASADDLDQVRIAMARQALLNQDLDMASDLVQAVLCHPSRRTGAS
ASASPSKVGASNAALEVLVGILTAQGTEADAGKDSWYSRQLNMCAGGLAS
CHSSSISSLLGHWRKLELDRFNSRAELGGVTPAASALRSASLETMEQLTA
AAEGEEGQSLSARCTSPLLQLCQAALSSGDVNLAVGCGLAMQDPGSALVA
LERWKEEAETAALAEATSKGQSDFTAPSSSKEEAEIEKEPQSGGGDDVVA
SEALVEALMKRGFSKNGVIRAARATRNASLDVALAWCFAHCGDKDFDAPL
PPPSSRRRDERVQGRERHEGEQGRDPAAVAALAVSGVAALEALAIAGKDI
QTAVGNGVEAWELLQAAADASLPTAQAAMGAESIRLAGLSAHLPAPVLTV
LEKHQANAASDEETRRLRAVLPGVDSQRLTSDPAYVEEALAQTVAASEDW
SVLEAALEVAGADRAWGLVRGRLSSWLGEGWAERRAGSDEATVCAGADAA
LRGVGGGQLLHILRRDPAAVLQELRVFYGMAGGEEMGRLELLLRMASDVA
EAPTTKRLQAHVGLLKRLLRIKLSGLDYKRLMGEDPFADPAVTGGPLEEV
QEAARSELRAVITRECLPTLSKLASRIHGLHASDIFLAYAHRVICGTASD
LSEETQSLLRGEGASAPVNDVAAASASVHHLLMEVMPKLAPGDKEQLLRA
VMLPHSTRVRARAKELQPLELAVPYRQKLVDGSELPLPAGWARALRAMEH
APTPQVACLLEAVHEDTEASAKLALVKIAAAGQGGDGGCTVTAIAGVLGC
AASVEEVYREAAEGLLRDLSGSENFGSDEEAALSSLLCFFESLDQSELLW
GTVQPVMELFCSGAAIEQGDLRHQTHLLKLLGDAGRLGEGRQGPSMGFMR
IADLVMMSCGASITPEDIQGWQARSNLLAKCIPIVAGNASGIAALAEVLE
MWSGGGDDDGNGDTRWSVLQWLQERRVTVAMQAMAPTLLLEDVGEVPLSP
EAIGCMRVWWPQLLQLMCQAGDWGLLARSCTAGPALAFTEEAFEMELLAR
MGGTDARSGEGALPPQAPEAPVAPVEVRCKMALASLHPAVQKEAVRPSLI
KGLSKNDRELLGLLLTSTALLATIGAPVFLAAAEIACSSSATPHGVGEPP
TSTAYCLASLALVCGHYHHLAAGLACQKTHLHPGLRTLGAGLSLLGRSLR
SDAAWEEMEQLGPNWLALRLYAKEVFESATYDQPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009060UBA-like_sf