prot_C-australica_Contig_1025.5.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1025.5.1
Unique Nameprot_C-australica_Contig_1025.5.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length153
Homology
[Close]
BLAST of mRNA_C-australica_Contig_1025.5.1 vs. uniprot
Match: A0A0M0JCQ0_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JCQ0_9EUKA)

HSP 1 Score: 63.2 bits (152), Expect = 9.740e-9
Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0 
Query:   62 RTLQQKISRHLGHLRQYYAVGTCIEQLEKWEEAHNERYDIVLKLRDDSVLMEPLLVEHAH-TEGAHFLKCMGWGGLDDKHFI 142
            R   ++++R   HL Q+  + TC + +E+ E A +  YD++LKLRD++V + P ++   H T GA   KC+ WGG +DK  +
Sbjct:  301 RPAAERMTRLQHHLSQFAHMRTCAQMIEQREIATHSHYDVILKLRDNTVAVAPFVISPHHATGGARTKKCVEWGGYNDKAMV 382
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1025.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0M0JCQ0_9EUKA9.740e-936.59Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1025contigC-australica_Contig_1025:12362..14010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1025.5.1mRNA_C-australica_Contig_1025.5.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1025 12362..14010 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1025.5.1 ID=prot_C-australica_Contig_1025.5.1|Name=mRNA_C-australica_Contig_1025.5.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=153bp
LYNTTKTTNEHDLEPGPWVHRSIQSLEDFLKEFAHDASVRLDDVPYFQVR
RSFVGALDKTYRTLQQKISRHLGHLRQYYAVGTCIEQLEKWEEAHNERYD
IVLKLRDDSVLMEPLLVEHAHTEGAHFLKCMGWGGLDDKHFIGGRDSAGK
LMS
back to top