mRNA_C-australica_Contig_999.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_999.1.1 vs. uniprot
Match: A0A5D6XL70_9STRA (SAP domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XL70_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.620e-12 Identity = 92/223 (41.26%), Postives = 117/223 (52.47%), Query Frame = 3 Query: 69 PQKMKVAELKAELTKRGLEQTGLKQDLVQRLQAALDEEEFGMLPAANEAAAAVVDDQPASKPEAAVPASTATGAEVAADAVAPXXXXXXXXXXXXXXXXXXXXXXAAADEVVAPSETVVEVDMSEED-------------QKMAQRAARFNIPKTEREKAVERQRRFGTGKAVENAAKAAAGSAXXXXXXAETKEKLASRAQRFGIITPQVEEDKRQKRAERF 698 P+KMKV+EL+A L RGL GLK +L+QRL+ ALDEEEFG EA A DD +K AA+P + +T + AP XXXXXXXXXXXXX A A E AP+ V D + ED +K RAA++ IP E +K VER +RF AA A A +A E + K RA+RF + T E K++ RA+RF Sbjct: 5 PKKMKVSELRAALESRGLSSNGLKSELIQRLELALDEEEFGSDAQDLEALAPPKDD---AKAAAALPHAESTVSPTKQAKKAPEXXXXXXXXXXXXXAETHQSTKATATEPDAPA-VVKPADKAPEDVTAGDAPKALTEEEKRKARAAKYGIPLKEEDKKVERAKRFNVSGGTGAAATAGAAAAPSE----EERAKKLQRAERFNLETADTLEKKKEARADRF 219
BLAST of mRNA_C-australica_Contig_999.1.1 vs. uniprot
Match: A0A835Z395_9STRA (SAP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z395_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 4.210e-10 Identity = 37/47 (78.72%), Postives = 42/47 (89.36%), Query Frame = 3 Query: 69 PQKMKVAELKAELTKRGLEQTGLKQDLVQRLQAALDEEEFGMLPAAN 209 PQKMKVA+LKAEL KR L+ TGLKQDL+QRLQAALDEEEFG+ P A+ Sbjct: 6 PQKMKVADLKAELAKRNLDSTGLKQDLIQRLQAALDEEEFGLAPDAD 52
BLAST of mRNA_C-australica_Contig_999.1.1 vs. uniprot
Match: T0RQ52_SAPDV (SAP domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0RQ52_SAPDV) HSP 1 Score: 64.7 bits (156), Expect = 1.500e-8 Identity = 82/248 (33.06%), Postives = 117/248 (47.18%), Query Frame = 3 Query: 54 VTMTQPQKMKVAELKAELTKRGLEQTGLKQDLVQRLQAALDEEEFGMLPAANEAAAAVVDDQPASKPEAAVPASTATGAEVAADAV-APXXXXXXXXXXXXXXXXXXXXXXAAADEVVAPSETVVEVDMSEEDQKMAQRAARFNIPKTEREKAVERQRRFGTGKA---VENAAKAAAGSAXXXXXXAETKEKLASRAQRFGIITPQVEEDKRQ-KRAERFQSAGEPKPGTGLNREEEIAKLKKRQERF 782 + + P+KMKVAE+K EL KRGL G+K +LVQRL+ ALDEEEFG A +A A + A P +AT V A AP AAA V V M+EE+++ A RAA+F IP TE ++ +ER +RF KA V+ + S E+ +K+ ++ + G ++ K++ +RA RF + +E KLK+RQERF Sbjct: 1 MAIVNPKKMKVAEIKDELAKRGLSTVGVKAELVQRLELALDEEEFGS-EAHEQATLAAAE---------ASPIGSATPEPVEEPAQEAPKEASPPKHAEPVPELVKDAPVVAAAP---------VTVGMTEEEKRKA-RAAKFGIPLTEDQRKMERAQRFNALKAAGAVDATVETVKKSKRAERFGIESDDKVQAQKKARGXXXXXTDDSKKKLERALRFNL---------VTKEVVDEKLKQRQERF 219
BLAST of mRNA_C-australica_Contig_999.1.1 vs. uniprot
Match: A0A6G0XW40_9STRA (SAP domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XW40_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.020e-7 Identity = 95/245 (38.78%), Postives = 118/245 (48.16%), Query Frame = 3 Query: 54 VTMTQPQKMKVAELKAELTKRGLEQTGLKQDLVQRLQAALDEEEFG-------------MLPAANEAAAAVV-----------DDQPASKPEAAVPASTATGAEVAADAVAPXXXXXXXXXXXXXXXXXXXXXXAAADEVVAPSETVVE--VDMSEEDQKMAQRAARFNIPKTEREKAVERQRRFGTGKAVENAAKAAAGSAXXXXXXAETKEKLA----SRAQRFGIITPQVEEDKRQKRAERF 698 + + P+KMKV E+K EL KRGL Q GLK +L+QRL+ ALDEEEFG + P A E + V DD P S PE V V AV XXXXXXXX AAA + P T V+ + E++K RA +F IP +E +K +ER +RF A + XXXXXX E+ EKL +RA RFGI E DK+ KRA RF Sbjct: 1 MAILNPKKMKVNEIKDELAKRGLSQAGLKAELIQRLELALDEEEFGGMDGPDSPVTKVDVTPVAVETKSPVHKKVDSIRSLLNDDTPPSAPEKPV---------VTQPAVKXXXXXXXXXTPAPKPTPLDTTPKAAA--ALVPQTTTVQPPAKVLTEEEKKRLRAEKFGIPLSEEQKILERAKRFQLPNAKLDETXXXXXXXXXXXXXEESAEKLEEKKKARADRFGI---NAEADKKLKRAMRF 231
BLAST of mRNA_C-australica_Contig_999.1.1 vs. uniprot
Match: K0RSW7_THAOC (SAP domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RSW7_THAOC) HSP 1 Score: 62.4 bits (150), Expect = 1.460e-7 Identity = 77/180 (42.78%), Postives = 94/180 (52.22%), Query Frame = 3 Query: 72 QKMKVAELKAELTKRGLEQTGLKQDLVQRLQAALDEEEFGMLPAANEAAAAVVDDQPASKPEAAVPASTATGAEVAAD---------AVAPXXXXXXXXXXXXXXXXXXXXXX------------AAADEVVAPSETVVEVD--MSEEDQKMAQRAARFNIPKTEREKAVERQRRFGTGK 542 +KMKVA+LK L++RGL GLK +L RLQ LDEEE+G++ A +AAA QPAS+ V A AEVAA+ V P XXXXXXXXXX A E VAP + + +V+ MS D +MAQRA RF I + K V R RFGTGK Sbjct: 7 KKMKVADLKEALSRRGLSTNGLKAELASRLQERLDEEEYGLISAPPASAAAA---QPASEAAGGVSAEQENKAEVAAEENPSAEEKSGVEPGSADDQLVLGXXXXXXXXXXEVVEHPKKETENNEARKPEAVAPKQDITKVNPGMSFAD-RMAQRAKRFGITPNDDVKKVMRAHRFGTGK 182
BLAST of mRNA_C-australica_Contig_999.1.1 vs. uniprot
Match: K3X8E5_GLOUD (SAP domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X8E5_GLOUD) HSP 1 Score: 62.0 bits (149), Expect = 2.020e-7 Identity = 87/232 (37.50%), Postives = 114/232 (49.14%), Query Frame = 3 Query: 57 TMTQPQKMKVAELKAELTKRGLEQTGLKQDLVQRLQAALDEEEFGMLPAANEAAAAVVDDQPASK--PEAAVPASTATGAEVAADAVAPXXXXXXXXXXXXXXXXXXXXXX----------------AAADEVVAPSETVVEVDMSEEDQKMAQRAARFNIPKTEREKAVERQRRFGTGKAVENAAKAAAGSAXXXXXXAETKEKLASRAQRFGIITPQVEEDKRQKRAERF 698 T P+KMKV+EL+A L RGL GLK +L+QRL+ ALDEEEFG E A +D ++ PEA PA+ A A P XXXXXXXXXXXXXXX A A EV +++ V E++K RAA+F IP + +RF AAA +A E +EK RA+RF + TP+ + K++ RA+RF Sbjct: 3 TAMVPKKMKVSELRAALESRGLSSNGLKSELIQRLELALDEEEFGSAAQEMEDLAPPSEDAAKAEAAPEAPSPAAPAVSTSPKKQATTPKKKEADAXXXXXXXXXXXXXXXXXXXXXXPADSVGKKDAPAKEVTPEADSGSAVQPLTEEEKRKARAAKFGIPLKHEDXLSXXXKRFNI---------AAAPAALTD----EDREKKLKRAERFNLETPETLDLKKEARADRF 221
BLAST of mRNA_C-australica_Contig_999.1.1 vs. uniprot
Match: A0A7S2UET9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UET9_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 2.910e-7 Identity = 61/154 (39.61%), Postives = 71/154 (46.10%), Query Frame = 3 Query: 60 MTQPQKMKVAELKAELTKRGLEQTGLKQDLVQRLQAALDEEEFGMLPAANEAAAAV-----------VDDQPASKPEAAVPASTATGAEVAADAVAPXXXXXXXXXXXXXXXXXXXXXXAAADEVVAPSETVVEVDMSEEDQKMAQRAARFNIP 488 M +KMKV+EL+ EL KRGL GLK DLV RLQA LDEEEFGM+ E AA +D PAS PE V S A+ D P A + P VVE +MS ++K A RAARF IP Sbjct: 1 MVDVKKMKVSELRDELQKRGLSTDGLKADLVNRLQARLDEEEFGMVEGVVEPVAAASSVPVEKVEPTAEDPPASTPEPVVQKSVTEPADQTPDVANPETTEAPVATSQKVETAPVAPL---ASTLAGP---VVENEMSFAEKKAA-RAARFGIP 147
BLAST of mRNA_C-australica_Contig_999.1.1 vs. uniprot
Match: A0A7S1D3T5_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D3T5_CYCTE) HSP 1 Score: 61.2 bits (147), Expect = 4.690e-7 Identity = 45/78 (57.69%), Postives = 51/78 (65.38%), Query Frame = 3 Query: 72 QKMKVAELKAELTKRGLEQTGLKQDLVQRLQAALDEEEFGML--PAANEAAAAVVDDQPASKPEAAVPASTATGAEVA 299 +KMKV+EL+A L KRGL GLK DLV RLQA LDEEEFGM+ P + E A V Q KPE A PAST +VA Sbjct: 30 KKMKVSELRAALQKRGLSTEGLKADLVNRLQARLDEEEFGMVVAPQSTETTAEKVTKQE-DKPEKAAPASTTELEQVA 106
BLAST of mRNA_C-australica_Contig_999.1.1 vs. uniprot
Match: A0A024UH29_9STRA (SAP domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UH29_9STRA) HSP 1 Score: 60.5 bits (145), Expect = 7.080e-7 Identity = 48/113 (42.48%), Postives = 58/113 (51.33%), Query Frame = 3 Query: 54 VTMTQPQKMKVAELKAELTKRGLEQTGLKQDLVQRLQAALDEEEFGMLPAA-------------NEAAAAVV------------DDQPASKPEAAVPASTATGAEVAADAVAP 317 + + P+KMKV E+K EL KRGL QTGLK +L+QRL+ ALDEEEFG L NE A VV DD P+++P A A A G A VAP Sbjct: 1 MAILNPKKMKVNEIKDELAKRGLSQTGLKPELIQRLELALDEEEFGGLDVPESSPVSTAVAVVENEVAPTVVMKKTDSIRSLLNDDTPSAEPAATALAKAAVGKPSATSTVAP 113
BLAST of mRNA_C-australica_Contig_999.1.1 vs. uniprot
Match: A0A6H5KS91_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS91_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 3.160e-6 Identity = 32/44 (72.73%), Postives = 36/44 (81.82%), Query Frame = 3 Query: 69 PQKMKVAELKAELTKRGLEQTGLKQDLVQRLQAALDEEEFGMLP 200 P KMKVA+LKAEL +RGL QTGLK DL QRLQ A+D +EFG LP Sbjct: 6 PLKMKVADLKAELGRRGLSQTGLKFDLAQRLQTAMDVDEFGTLP 49 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_999.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_999.1.1 >prot_C-australica_Contig_999.1.1 ID=prot_C-australica_Contig_999.1.1|Name=mRNA_C-australica_Contig_999.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=293bp MTQPQKMKVAELKAELTKRGLEQTGLKQDLVQRLQAALDEEEFGMLPAANback to top mRNA from alignment at C-australica_Contig_999:204..1710- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_999.1.1 ID=mRNA_C-australica_Contig_999.1.1|Name=mRNA_C-australica_Contig_999.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1507bp|location=Sequence derived from alignment at C-australica_Contig_999:204..1710- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_999:204..1710- >mRNA_C-australica_Contig_999.1.1 ID=mRNA_C-australica_Contig_999.1.1|Name=mRNA_C-australica_Contig_999.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=879bp|location=Sequence derived from alignment at C-australica_Contig_999:204..1710- (Chrysoparadoxa australica CS_1217)back to top |