mRNA_C-australica_Contig_997.7.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_997.7.1 vs. uniprot
Match: D7G6E4_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E4_ECTSI) HSP 1 Score: 191 bits (485), Expect = 4.960e-57 Identity = 96/168 (57.14%), Postives = 124/168 (73.81%), Query Frame = 1 Query: 10 LKQIIIDQARGTDNGLSASPEAAELIKASVNKLVKLNKVRKTSTSELHNGTFKLVYTSTSGSSGGKLGPFVGTVQQIIDMKNVHYDNVVQLGPLQGVLGATWEVLNEKQWKVIFLDIAFKLLGVELIRKELGQEGLWTLTYVDDDFRVLTARSLERNDGGNLYVLARA 513 LKQ I+++A GT NGL A+P+ + I ++N L N + +TSEL GT+ L+YT+T G+SGGKLGPF+G VQQ +D+ Y N V+LGPL G L ATW+V+N+ QWKV+F IAF L G +L++ EL Q GLWTL+Y+DDD RVLTARSLER D GN+YVLARA Sbjct: 62 LKQTILEEAAGTSNGLKATPQQRDAISKAINGLAAANPTKDITTSELATGTWDLIYTTTPGASGGKLGPFIGEVQQEVDIAEGLYVNYVRLGPLTGRLEATWDVVNKSQWKVVFKSIAFLLFGQQLVKNELDQAGLWTLSYLDDDMRVLTARSLER-DTGNVYVLARA 228
BLAST of mRNA_C-australica_Contig_997.7.1 vs. uniprot
Match: A0A0G4HUN5_9ALVE (PAP_fibrillin domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HUN5_9ALVE) HSP 1 Score: 139 bits (351), Expect = 2.830e-37 Identity = 79/178 (44.38%), Postives = 106/178 (59.55%), Query Frame = 1 Query: 1 AEDLKQIIIDQARGTDNGLSASPEAAELIKASVNKLVKLNKVRKTSTSEL---HNGTFKLVYTSTSGSSGGKLGPFVGTVQQIIDMKNVHYDNVVQLGP----LQGVLGATWEVLNEKQWKVIFLDIAFKLLGVELIRKELGQEGLWTLTYVDDDFRVLTARSLERNDGGNLYVLARA 513 AE+LK I A T NG+ AS E + + KL K+NKV+ T+ S++ + T++LVYT T +S GKLGPFVG V Q D Y N VQLGP LQ LGA WE + +W V+F IAF++LGVE+ +KE G W LTY+D D R+L A S R + ++YVL ++ Sbjct: 22 AEELKASIKRLAAPTSNGVKASQAQREALDEMIKKLEKMNKVKNTAKSDIVGQGSATWRLVYTDTDSTSSGKLGPFVGEVLQKFDWPQKKYTNFVQLGPDGAILQAALGARWEPVGSDKWNVVFESIAFRILGVEVKKKEFEGAGTWRLTYIDPDMRILYAASSRRPEVEHVYVLEKS 199
BLAST of mRNA_C-australica_Contig_997.7.1 vs. uniprot
Match: K8Z6W7_NANGC (PAP_fibrillin domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z6W7_NANGC) HSP 1 Score: 140 bits (353), Expect = 4.420e-37 Identity = 83/176 (47.16%), Postives = 110/176 (62.50%), Query Frame = 1 Query: 10 LKQIIIDQARGTDNGLSASPEAAELIKASVNKLVKLNKVRKTSTSELHNGTFKLVYTSTSGSSGGKLGPFVGTVQQIIDMKNVHYDNVVQL--GPLQGVLGATWEVLNEKQWKVIFLDIAFKLLGVELIRKE--LGQEGLWTLTYVDDDFRVLTARSLERNDG-----GNLYVLAR 510 LKQ + A+ DNGL A+ I + ++L+K N + +TS+ +GT++LVYTSTSG S GKLGPFVG V Q ID Y N V+L G ++G L ATWEV +WKVIF DI F++ G+ L+ K+ GQ G W LTYVD+D R+LTA +L N+G N+YVL R Sbjct: 66 LKQDLYAVAKNKDNGLKATESDKAKILSLASELIKRNPTKNIATSDKVDGTWRLVYTSTSGGSAGKLGPFVGQVLQKIDTAGGDYVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRVFGIPLVDKKPLSGQAGQWKLTYVDEDLRILTAAALT-NEGKPAKVSNIYVLRR 240
BLAST of mRNA_C-australica_Contig_997.7.1 vs. uniprot
Match: A0A8J6CA72_DIALT (PAP_fibrillin domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CA72_DIALT) HSP 1 Score: 138 bits (347), Expect = 1.250e-36 Identity = 81/176 (46.02%), Postives = 107/176 (60.80%), Query Frame = 1 Query: 1 AEDLKQIIIDQARGTDNGLSASPEAAELIKASVNKLVKLNKVRKTSTSELHNGTFKLVYTSTSGSSGGKLGPFVGTVQQIIDMKNVHYDNVVQLGP-----LQGVLGATWEVLNEKQWKVIFLDIAFKLLGVELIR-KELGQEGLWTLTYVDDDFRVLTARSLERNDGGNLYVLAR 510 A LK I+ A GT NGL+A A I+A L +LN +TSEL +G ++LVYTSTSG S GK+GPFVG V+Q D++ Y N V LGP + G L ATW+VL + W+V F I+F LLG+ +++ K L Q G W L Y DDDFR+L A+ + + N+YVL R Sbjct: 24 ARPLKSSIVRLAAGTQNGLTADVSTAAQIQALAKLLEELNPTAHLATSELVDGQWQLVYTSTSGGSAGKIGPFVGRVEQHFDLRQGRYKNFVHLGPQAIDLVTGELQATWDVLGDALWRVNFKSISFFLLGLPIVKDKPLSQCGTWRLVYTDDDFRILWAQGGTKPE--NIYVLKR 197
BLAST of mRNA_C-australica_Contig_997.7.1 vs. uniprot
Match: A0A0G4E8H9_VITBC (PAP_fibrillin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4E8H9_VITBC) HSP 1 Score: 137 bits (346), Expect = 5.390e-36 Identity = 76/175 (43.43%), Postives = 110/175 (62.86%), Query Frame = 1 Query: 1 AEDLKQIIIDQARGTDNGLSASPEAAELIKASVNKLVKLNKVRKTSTSELHNGTFKLVYTSTSGSSGGKLGPFVGTVQQIIDMKNVHYDNVVQLGPLQGVLGATWEVLNEKQWKVIFLDIAFKLLGVELIRKELGQEGLWTLTYVDDDFRVLTAR-SLERNDGG----NLYVLAR 510 A LK+ I A+G DNG+ +P E I + V +L + ++ + S+ NG ++LVYT+T GSS GKLGPFVG V Q+IDM + Y N V +GP+Q L A+W+VL +W+V F +I F++ G+ L + EL G W +TY+DDD+R+L AR S ++ D N+YVL R Sbjct: 69 AASLKREIGRIAKGKDNGIKVTPAEREKILSLVKQLESSSPIKAAAQSKRLNGLWRLVYTTTPGSSAGKLGPFVGDVTQMIDMDSDVYINYVDIGPVQAFLEASWDVLGPNRWRVKFQNIGFRVFGIPLAKNELKNVGDWRMTYLDDDYRILWARGSRQQPDASAMPENVYVLRR 243
BLAST of mRNA_C-australica_Contig_997.7.1 vs. uniprot
Match: A0A7S4NCX2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NCX2_9STRA) HSP 1 Score: 135 bits (340), Expect = 8.900e-35 Identity = 75/174 (43.10%), Postives = 110/174 (63.22%), Query Frame = 1 Query: 7 DLKQIIIDQARGTDNGLSASPEAAELIKASVNKLVKLNKVRKTSTSELHNGTFKLVYTSTSGSSGGKLGPFVGTVQQIIDMK----NVHYDNVVQLG--PLQGVLGATWEVLNEKQWKVIFLDIAFKLLGVELIRKELGQEGLWTLTYVDDDFRVLTARSLERNDGGNLYVLAR 510 ++K I D A GT NG +AS E + I A ++L N STS +G++KL Y++ G+S GKLGPFVG V+Q+I ++ + Y N V+LG ++G L ATW+VL E +W+V F + F++LGV L+ KELG EG+W +TY+D+DFR+L A N+Y+LA+ Sbjct: 102 EIKSEIKDLAAGTSNGCTASEEVRDGIAALASELEGANPTPDLSTSPRMDGSWKLTYSTNGGTSAGKLGPFVGEVEQLIRIEGREDSPDYINYVRLGGGAVEGALTATWDVLAEDKWRVKFGSVTFRVLGVPLVEKELGAEGIWRMTYLDEDFRILYAAGGVNVPKENIYILAK 275
BLAST of mRNA_C-australica_Contig_997.7.1 vs. uniprot
Match: A0A7S4CQT7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CQT7_9EUGL) HSP 1 Score: 126 bits (317), Expect = 1.050e-30 Identity = 73/171 (42.69%), Postives = 102/171 (59.65%), Query Frame = 1 Query: 4 EDLKQIIIDQARGTDNGLSASPEAAELIKASVNKLVKLNKVRKTSTSELHNGTFKLVYTSTSGSSGGKLGPFVGTVQQIIDMKNVHYDNVVQLGP--LQGVLGATWEVLNEKQWKVIFLDIAFKLLGVELIRKELGQEGLWTLTYVDDDFRVLTARSLERNDGGNLYVLAR 510 E LK+ I A GT NG SAS + +V+KL KLN + +TSE G +KL+YT+ +G+S GKLGPFVG V Q + + Y+N+V+LGP ++ LGA W+VL +W+V F I F L G + KE+ G+W +TY+DD RVL A + N+YVL + Sbjct: 180 ESLKKEIFRLAEGTSNGTSASEDTKAAFLDAVSKLEKLNPEPEIATSEGMTGNWKLLYTTNTGNSAGKLGPFVGDVFQNVVYSSGKYENIVRLGPGIVEACLGADWDVLGPCKWQVNFRYIRFSLFGNVVSEKEVSNCGVWRMTYLDDSMRVLWASGGKNAKVENVYVLVK 350
BLAST of mRNA_C-australica_Contig_997.7.1 vs. uniprot
Match: L1J7Z3_GUITC (PAP_fibrillin domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J7Z3_GUITC) HSP 1 Score: 106 bits (265), Expect = 1.470e-24 Identity = 60/183 (32.79%), Postives = 97/183 (53.01%), Query Frame = 1 Query: 40 GTDNGLSASPEAAELIKASVNKLVKLNKVRKTSTSELHNGTFKLVYTSTSGSSGGKLGPFVGTVQQIIDMKNVHYDNVVQLGPLQGVLGATWEVLNEKQWKVIFLDIAFKLLGVELIRKELGQE-------------------------GLWTLTYVDDDFRVLTARSLERNDG-GNLYVLAR 510 G NG+ AS + +K +L KLN ++ +TS + +G ++LV+++T G S G LGPFVG V Q I ++ Y N+++LG ++ VL A W+V+ +++W+V F DI F L G+ + +KE G+W + Y +D RVL A ++R ++YVL R Sbjct: 13 GPKNGVGASEDLILSVKEKATELAKLNPTQRQATSPMLDGKWRLVFSTTKGPSSGMLGPFVGDVFQDIVLEQEKYFNILELGFVEAVLSAHWDVMGQEKWRVFFDDIQFSLFGIPVFKKEFSSSQRDQVLEGLDTLGGTEKEARSSNNGGIWDMAYCNDTLRVLWAYGVQREASKASIYVLER 195
BLAST of mRNA_C-australica_Contig_997.7.1 vs. uniprot
Match: A0A7S4PIN3_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PIN3_GUITH) HSP 1 Score: 107 bits (266), Expect = 3.390e-24 Identity = 62/194 (31.96%), Postives = 103/194 (53.09%), Query Frame = 1 Query: 10 LKQIIIDQAR-GTDNGLSASPEAAELIKASVNKLVKLNKVRKTSTSELHNGTFKLVYTSTSGSSGGKLGPFVGTVQQIIDMKNVHYDNVVQLGPLQGVLGATWEVLNEKQWKVIFLDIAFKLLGVELIRKELGQE-------------------------GLWTLTYVDDDFRVLTARSLERNDG-GNLYVLAR 510 L+Q ++ + G NG+ AS + +K +L KLN ++ +TS + +G ++LV+++T G S G LGPFVG V Q I ++ Y N+++LG ++ VL A W+V+ +++W+V F DI F L G+ + +KE G+W + Y +D RVL A ++R ++YVL R Sbjct: 52 LRQGLLQLCKSGPKNGVGASEDLILSVKEKATELAKLNPTQRQATSPMLDGKWRLVFSTTKGPSSGMLGPFVGDVFQDIVLEQEKYFNILELGFVEAVLSAHWDVMGQEKWRVFFDDIQFSLFGIPVFKKEFSSSQRDQVLEGLDTLGGTEKEARSSNNGGIWDMAYCNDTLRVLWAYGVQREASKASIYVLER 245
BLAST of mRNA_C-australica_Contig_997.7.1 vs. uniprot
Match: A0A7S0G154_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G154_9RHOD) HSP 1 Score: 99.4 bits (246), Expect = 1.320e-21 Identity = 48/120 (40.00%), Postives = 75/120 (62.50%), Query Frame = 1 Query: 157 GTFKLVYTSTSGSSGGKLGPFVGTVQQIIDMKNVHYDNVVQLGPLQGVLGATWEVLNEKQWKVIFLDIAFKLLGVELIRKEL--GQEGLWTLTYVDDDFRVLTARSLERNDGGNLYVLAR 510 G++ L YTS+ +S GK+GPFVG V+Q ID++N ++N+ LGPL+ LGATW+VL++ + V+FL L G+ + + G G W + Y D+D RVL + +++ L+VL R Sbjct: 93 GSWYLEYTSSISTSSGKVGPFVGQVKQKIDLENRRFENICLLGPLKFDLGATWKVLDDNNFNVLFLTKEISLFGISVQKSPFPDGSGGFWRMGYTDEDLRVLWTKRFQKDKNEMLFVLRR 212 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_997.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_997.7.1 >prot_C-australica_Contig_997.7.1 ID=prot_C-australica_Contig_997.7.1|Name=mRNA_C-australica_Contig_997.7.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=90bp MKNVHYDNVVQLGPLQGVLGATWEVLNEKQWKVIFLDIAFKLLGVELIRKback to top mRNA from alignment at C-australica_Contig_997:7201..8534+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_997.7.1 ID=mRNA_C-australica_Contig_997.7.1|Name=mRNA_C-australica_Contig_997.7.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1334bp|location=Sequence derived from alignment at C-australica_Contig_997:7201..8534+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_997:7201..8534+ >mRNA_C-australica_Contig_997.7.1 ID=mRNA_C-australica_Contig_997.7.1|Name=mRNA_C-australica_Contig_997.7.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=270bp|location=Sequence derived from alignment at C-australica_Contig_997:7201..8534+ (Chrysoparadoxa australica CS_1217)back to top |