Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Stop | 1 |
Start | 1 |
Model size | 248 |
Hectar predicted targeting category | no signal peptide or anchor |
Exons | 2 |
Cds size | 129 |
Relationships
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1682588864.7142856-UTR-C-australica_Contig_997:3824..3859 | 1682588864.7142856-UTR-C-australica_Contig_997:3824..3859 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_997 3825..3859 - |
1682588864.7475805-UTR-C-australica_Contig_997:4207..4291 | 1682588864.7475805-UTR-C-australica_Contig_997:4207..4291 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_997 4208..4291 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1682588864.726809-CDS-C-australica_Contig_997:3859..3902 | 1682588864.726809-CDS-C-australica_Contig_997:3859..3902 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_997 3860..3902 - |
1682588864.7353544-CDS-C-australica_Contig_997:4121..4207 | 1682588864.7353544-CDS-C-australica_Contig_997:4121..4207 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_997 4122..4207 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_997.4.1 >prot_C-australica_Contig_997.4.1 ID=prot_C-australica_Contig_997.4.1|Name=mRNA_C-australica_Contig_997.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=43bp
MWCGMIRNIGSRNMGAMGEHYPPSLQEPSDALLCLSCCCPSS* back to topmRNA from alignment at C-australica_Contig_997:3825..4291- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_997.4.1 ID=mRNA_C-australica_Contig_997.4.1|Name=mRNA_C-australica_Contig_997.4.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=467bp|location=Sequence derived from alignment at C-australica_Contig_997:3825..4291- (Chrysoparadoxa australica CS_1217) GTTTTTCGGGTTGATTTTTCCCTTTGTACACCCTTTCGAGCAGAGCCAAG
GAAAGCATCTCTCTCTGTCTCCATATATTTCCTAATGTGGTGCGGTATGA
TTAGGAACATTGGGAGCAGGAACATGGGAGCAATGGGGGAACATTATCCC
CCTTCACTTCAAGAACCCAGGTAAGCTAAGGGAGTAAGCCTTTGAAAGGC
CTCGTTCAGGACAGACTTGCCAAATGTACGGCATAGAGAGCTTGAGATAC
CATGCAGATTCCCTACTTTAAACTGCAGTTGGTTCCTCTACTCTCCCCTT
CACTTCCTTTAGTTCATCAGGCACCTCCACTTCTCCGAGCCCCAAACTGT
TCCCTTTTAAACTACTCTCTGCATCTCCTCCACCTCCAGCGATGCGCTTC
TCTGCCTCAGTTGCTGCTGTCCTAGCAGCTAATGTTGCTAGCGGGGAGGG
CGCAGCATTCAACTCCG back to topCoding sequence (CDS) from alignment at C-australica_Contig_997:3825..4291- >mRNA_C-australica_Contig_997.4.1 ID=mRNA_C-australica_Contig_997.4.1|Name=mRNA_C-australica_Contig_997.4.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=129bp|location=Sequence derived from alignment at C-australica_Contig_997:3825..4291- (Chrysoparadoxa australica CS_1217) ATGTGGTGCGGTATGATTAGGAACATTGGGAGCAGGAACATGGGAGCAAT GGGGGAACATTATCCCCCTTCACTTCAAGAACCCAGCGATGCGCTTCTCT GCCTCAGTTGCTGCTGTCCTAGCAGCTAA back to top
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