mRNA_C-australica_Contig_9962.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_9962.1.1 vs. uniprot
Match: A3UK66_9PROT (Probable membrane transporter protein n=3 Tax=Oceanicaulis TaxID=153232 RepID=A3UK66_9PROT) HSP 1 Score: 266 bits (681), Expect = 5.840e-88 Identity = 140/155 (90.32%), Postives = 144/155 (92.90%), Query Frame = 1 Query: 1 MDASLIPFILTLLAVGAFAGLIAGLFGIGGGIVMVPALYYVLTALGYEAHAMHAAVGTSLMVIVTTSLRSVAAHAQKGAVDFAVLKGWTPFIVIGALLGSAVADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLADQLPGHPWKALLGGVIGVL 465 MDASLIPFIL LLAVGAFAGLIAGLFGIGGGI+MVPALYYVLT LGYEAHAMHAAVGTSLMVIV TSLRSVAAHAQKGAVDF VLK WTPFIV+GALLGSAVADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLAD LPG P K +LG IG+L Sbjct: 1 MDASLIPFILALLAVGAFAGLIAGLFGIGGGIIMVPALYYVLTGLGYEAHAMHAAVGTSLMVIVATSLRSVAAHAQKGAVDFKVLKTWTPFIVLGALLGSAVADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLADDLPGQPMKTVLGMTIGIL 155
BLAST of mRNA_C-australica_Contig_9962.1.1 vs. uniprot
Match: A0A2U2BSR8_9PROT (Probable membrane transporter protein n=1 Tax=Marinicauda salina TaxID=2135793 RepID=A0A2U2BSR8_9PROT) HSP 1 Score: 235 bits (600), Expect = 1.130e-75 Identity = 120/152 (78.95%), Postives = 134/152 (88.16%), Query Frame = 1 Query: 10 SLIPFILTLLAVGAFAGLIAGLFGIGGGIVMVPALYYVLTALGYEAHAMHAAVGTSLMVIVTTSLRSVAAHAQKGAVDFAVLKGWTPFIVIGALLGSAVADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLADQLPGHPWKALLGGVIGVL 465 S +PF+ L+AVGAFAGLIAGLFGIGGG+VMVPALYY ALGY+ HAMHAAVGTSL VIV TSLRSVAAHA++GAVDF VL+ WTP+IV+GAL GSA+ADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLAD LPG P + +LG IG+L Sbjct: 3 SYLPFLAGLIAVGAFAGLIAGLFGIGGGVVMVPALYYTFNALGYDGHAMHAAVGTSLAVIVATSLRSVAAHAKRGAVDFHVLRTWTPWIVVGALAGSAIADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLADDLPGLPLRGVLGAFIGIL 154
BLAST of mRNA_C-australica_Contig_9962.1.1 vs. uniprot
Match: A0A4V3RYU7_9PROT (Probable membrane transporter protein n=2 Tax=Marinicauda pacifica TaxID=1133559 RepID=A0A4V3RYU7_9PROT) HSP 1 Score: 217 bits (552), Expect = 1.960e-68 Identity = 112/144 (77.78%), Postives = 123/144 (85.42%), Query Frame = 1 Query: 34 LLAVGAFAGLIAGLFGIGGGIVMVPALYYVLTALGYEAHAMHAAVGTSLMVIVTTSLRSVAAHAQKGAVDFAVLKGWTPFIVIGALLGSAVADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLADQLPGHPWKALLGGVIGVL 465 LLA GAFAGLIAGLFGIGGG+VMVPALYY L+ALGYE HAMHAAVGTSL VIV+TSLRSVAAHA +GAVDF VL+ WTP+IV+GAL GS +ADLAPG LT LFG VALLLSAQFFFGRPDWKLA +PG P +LG +IG L Sbjct: 8 LLATGAFAGLIAGLFGIGGGVVMVPALYYTLSALGYEDHAMHAAVGTSLTVIVSTSLRSVAAHAGRGAVDFDVLRRWTPWIVLGALTGSVIADLAPGEVLTALFGIVALLLSAQFFFGRPDWKLAQDMPGLPMSGVLGTLIGTL 151
BLAST of mRNA_C-australica_Contig_9962.1.1 vs. uniprot
Match: A0A4S2H2Y2_9PROT (Probable membrane transporter protein n=1 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4S2H2Y2_9PROT) HSP 1 Score: 216 bits (551), Expect = 3.150e-68 Identity = 114/155 (73.55%), Postives = 126/155 (81.29%), Query Frame = 1 Query: 1 MDASLIPFILTLLAVGAFAGLIAGLFGIGGGIVMVPALYYVLTALGYEAHAMHAAVGTSLMVIVTTSLRSVAAHAQKGAVDFAVLKGWTPFIVIGALLGSAVADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLADQLPGHPWKALLGGVIGVL 465 M L F+ LLA GAFAGLIAGLFGIGGG+VMVPALY+ TALGYE HAMHAAVGTSL VIV TSLRSVAAHA++GAVD VLK WTP+IVIGAL GS +AD P R LTGLFGAVAL+LSAQFFFGRPDWKLA+ +PG P +LG IG+L Sbjct: 1 MSGELWLFLAGLLATGAFAGLIAGLFGIGGGVVMVPALYFTFTALGYETHAMHAAVGTSLTVIVATSLRSVAAHARRGAVDGHVLKTWTPWIVIGALAGSVLADFIPSRGLTGLFGAVALVLSAQFFFGRPDWKLAEAMPGLPLSGVLGAFIGIL 155
BLAST of mRNA_C-australica_Contig_9962.1.1 vs. uniprot
Match: UPI00038128EE (sulfite exporter TauE/SafE family protein n=1 Tax=Woodsholea maritima TaxID=240237 RepID=UPI00038128EE) HSP 1 Score: 207 bits (527), Expect = 1.280e-64 Identity = 107/147 (72.79%), Postives = 125/147 (85.03%), Query Frame = 1 Query: 25 ILTLLAVGAFAGLIAGLFGIGGGIVMVPALYYVLTALGYEAHAMHAAVGTSLMVIVTTSLRSVAAHAQKGAVDFAVLKGWTPFIVIGALLGSAVADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLADQLPGHPWKALLGGVIGVL 465 I+ LL GA AGLIAGLFGIGGGI+MVPALYYV +ALG++ AMHAAVGTSL VI+ TSLRSV+AHA++GAVDFA++K W P+I+IGAL+GSA+A LAPG LTGLFG VAL+LSAQFFFGRPDWKLA+ LPG P A LG +IG L Sbjct: 8 IIALLITGAVAGLIAGLFGIGGGIIMVPALYYVFSALGFDDTAMHAAVGTSLAVIIATSLRSVSAHAKRGAVDFALIKVWAPWIIIGALIGSALAGLAPGIVLTGLFGVVALILSAQFFFGRPDWKLAEDLPGFPLNAGLGALIGGL 154
BLAST of mRNA_C-australica_Contig_9962.1.1 vs. uniprot
Match: A0A5M6ZCS8_9PROT (Probable membrane transporter protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A5M6ZCS8_9PROT) HSP 1 Score: 202 bits (513), Expect = 1.740e-62 Identity = 106/148 (71.62%), Postives = 118/148 (79.73%), Query Frame = 1 Query: 22 FILTLLAVGAFAGLIAGLFGIGGGIVMVPALYYVLTALGYEAHAMHAAVGTSLMVIVTTSLRSVAAHAQKGAVDFAVLKGWTPFIVIGALLGSAVADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLADQLPGHPWKALLGGVIGVL 465 FIL LLAVGAFAGLIAGLFGIGGG+VMVPA+YY L LGY HAMHAAVGTSL VIV TSLRSVAAHA + AVDF VL+ WTP+IV+GAL GSA+A P R L +F +AL+LS QFFFGR DW+L D LPG PW+A L G IGVL Sbjct: 8 FILALLAVGAFAGLIAGLFGIGGGVVMVPAMYYTLKLLGYPDHAMHAAVGTSLAVIVVTSLRSVAAHAGRDAVDFKVLRQWTPWIVLGALAGSALAGAIPTRGLVFIFAIMALILSLQFFFGRGDWRLGDDLPGQPWRAGLAGFIGVL 155
BLAST of mRNA_C-australica_Contig_9962.1.1 vs. uniprot
Match: A0A3T0EAU1_9PROT (Probable membrane transporter protein n=4 Tax=Maricaulaceae TaxID=2800061 RepID=A0A3T0EAU1_9PROT) HSP 1 Score: 201 bits (510), Expect = 4.810e-62 Identity = 103/150 (68.67%), Postives = 119/150 (79.33%), Query Frame = 1 Query: 16 IPFILTLLAVGAFAGLIAGLFGIGGGIVMVPALYYVLTALGYEAHAMHAAVGTSLMVIVTTSLRSVAAHAQKGAVDFAVLKGWTPFIVIGALLGSAVADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLADQLPGHPWKALLGGVIGVL 465 I ++LTLLAVGAFAGLIAGLFGIGGG+VMVPA+YY L LGY HAMHAAVGTSL VIV TS RSV AHA++GAVDF +LK W P+IV+GAL GSA+A P R L +F AL+LS QFFFGR DWKL D LPG P++ALL G IG++ Sbjct: 5 IVYLLTLLAVGAFAGLIAGLFGIGGGVVMVPAMYYTLVFLGYPEHAMHAAVGTSLAVIVITSARSVMAHAKRGAVDFDILKKWCPWIVLGALAGSAIAGAIPTRGLVFIFAITALVLSLQFFFGRADWKLGDDLPGQPFRALLAGTIGIM 154
BLAST of mRNA_C-australica_Contig_9962.1.1 vs. uniprot
Match: A0A1G9Q0X2_9PROT (Probable membrane transporter protein n=1 Tax=Maricaulis salignorans TaxID=144026 RepID=A0A1G9Q0X2_9PROT) HSP 1 Score: 195 bits (495), Expect = 9.230e-60 Identity = 99/143 (69.23%), Postives = 118/143 (82.52%), Query Frame = 1 Query: 40 AVGAFAGLIAGLFGIGGGIVMVPALYYVLTALGYEAHA-MHAAVGTSLMVIVTTSLRSVAAHAQKGAVDFAVLKGWTPFIVIGALLGSAVADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLADQLPGHPWKALLGGVIGVL 465 A GAFAGL+AGLFGIGGG+VMVPA+YY L+ALGY+ MH AVGTSL VIV TS+RS++AHA++GAVDF VL+ W P+IV G LLGS +AD GR LTGLFG +ALLLS QFFFGRPDWKL D+LPG P +A LGG+IG++ Sbjct: 13 ATGAFAGLVAGLFGIGGGVVMVPAMYYALSALGYQDDKLMHVAVGTSLAVIVATSMRSLSAHAKRGAVDFQVLRSWGPWIVGGTLLGSVIADQVSGRVLTGLFGGMALLLSLQFFFGRPDWKLRDELPGGPARAGLGGLIGIM 155
BLAST of mRNA_C-australica_Contig_9962.1.1 vs. uniprot
Match: Q0AR39_MARMM (Probable membrane transporter protein n=3 Tax=Maricaulis TaxID=74317 RepID=Q0AR39_MARMM) HSP 1 Score: 190 bits (483), Expect = 6.200e-58 Identity = 98/148 (66.22%), Postives = 117/148 (79.05%), Query Frame = 1 Query: 25 ILTLLAVGAFAGLIAGLFGIGGGIVMVPALYYVLTALGYE-AHAMHAAVGTSLMVIVTTSLRSVAAHAQKGAVDFAVLKGWTPFIVIGALLGSAVADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLADQLPGHPWKALLGGVIGVL 465 ++ + A GAFAGLIAGLFGIGGGIVMVPA+Y+ LGY+ M AVGTSL VI+ TS RSVAAHA++ AVDFAVL+GW P+IVIG L+GS +A L PG LTGLFG A++LSAQFFFGRPDW+LAD LPG P + LGG+IG+L Sbjct: 8 VVAMAATGAFAGLIAGLFGIGGGIVMVPAMYFAFQFLGYDDPRIMQVAVGTSLAVIIATSARSVAAHAKRDAVDFAVLRGWAPWIVIGTLVGSRIAHLLPGNFLTGLFGVTAMILSAQFFFGRPDWRLADDLPGGPLRWGLGGLIGIL 155
BLAST of mRNA_C-australica_Contig_9962.1.1 vs. uniprot
Match: A0A2D7Y2S7_9PROT (Probable membrane transporter protein n=3 Tax=Maricaulis TaxID=74317 RepID=A0A2D7Y2S7_9PROT) HSP 1 Score: 189 bits (481), Expect = 1.210e-57 Identity = 98/148 (66.22%), Postives = 116/148 (78.38%), Query Frame = 1 Query: 25 ILTLLAVGAFAGLIAGLFGIGGGIVMVPALYYVLTALGYE-AHAMHAAVGTSLMVIVTTSLRSVAAHAQKGAVDFAVLKGWTPFIVIGALLGSAVADLAPGRALTGLFGAVALLLSAQFFFGRPDWKLADQLPGHPWKALLGGVIGVL 465 +L + A GAFAGLIAGLFGIGGGIVMVPA+YY LGY+ M AVGTSL VI+ TSLRSV AHA++GAVDF VLKGW +I+IG L+GS +A L PG LTG+FG +A+LLSAQFFFGRPDW LAD +P P + LLGG+IG+L Sbjct: 8 VLAMAATGAFAGLIAGLFGIGGGIVMVPAMYYAFQFLGYDDPRIMQIAVGTSLAVIIATSLRSVNAHAKRGAVDFDVLKGWALWIIIGTLIGSRIAHLIPGYILTGIFGGMAILLSAQFFFGRPDWTLADDMPSGPLRWLLGGIIGIL 155 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9962.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9962.1.1 >prot_C-australica_Contig_9962.1.1 ID=prot_C-australica_Contig_9962.1.1|Name=mRNA_C-australica_Contig_9962.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=155bp MDASLIPFILTLLAVGAFAGLIAGLFGIGGGIVMVPALYYVLTALGYEAHback to top mRNA from alignment at C-australica_Contig_9962:382..846+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_9962.1.1 ID=mRNA_C-australica_Contig_9962.1.1|Name=mRNA_C-australica_Contig_9962.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=465bp|location=Sequence derived from alignment at C-australica_Contig_9962:382..846+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_9962:382..846+ >mRNA_C-australica_Contig_9962.1.1 ID=mRNA_C-australica_Contig_9962.1.1|Name=mRNA_C-australica_Contig_9962.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=465bp|location=Sequence derived from alignment at C-australica_Contig_9962:382..846+ (Chrysoparadoxa australica CS_1217)back to top |