mRNA_C-australica_Contig_9942.2.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_9942.2.1 vs. uniprot
Match: A0A3D5S5U7_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D5S5U7_9BACT) HSP 1 Score: 189 bits (481), Expect = 4.380e-56 Identity = 89/117 (76.07%), Postives = 101/117 (86.32%), Query Frame = 1 Query: 1 YGSLQGHILPKVQLGGSLMIPDEISEEAPAVVRLNADLERLADKVSLHASYIKGNLATLKDAFIFDENSLAKIRFIYHMNKFLAVGMDYYWAFAPADDGSYKATRYISPYFGLSIAF 351 YGSL G IL KVQ+GGSLM+PD IS+E PA VR+NAD++RL DKVS+HASYIKGNL+TL+D F FDE SLAK+RFIYHMNKFLA G+DYYWAF P DG YKA +YISPYFGLSIAF Sbjct: 354 YGSLTGQILQKVQIGGSLMLPDNISDETPATVRVNADIDRLGDKVSMHASYIKGNLSTLQDTFTFDERSLAKVRFIYHMNKFLAAGIDYYWAFTPTADGGYKAEKYISPYFGLSIAF 470
BLAST of mRNA_C-australica_Contig_9942.2.1 vs. uniprot
Match: A0A5E7XQM2_9BACT (Uncharacterized protein n=1 Tax=Imperialibacter sp. EC-SDR9 TaxID=2038371 RepID=A0A5E7XQM2_9BACT) HSP 1 Score: 189 bits (480), Expect = 4.540e-55 Identity = 87/117 (74.36%), Postives = 103/117 (88.03%), Query Frame = 1 Query: 1 YGSLQGHILPKVQLGGSLMIPDEISEEAPAVVRLNADLERLADKVSLHASYIKGNLATLKDAFIFDENSLAKIRFIYHMNKFLAVGMDYYWAFAPADDGSYKATRYISPYFGLSIAF 351 YGSL GHIL KVQLGGS+++PD++SE APAVVRLNAD++RL DKVS+H SY+KGNL+TLKDAF DE SL K+RFIYH+N+FLA G+DYYWAFAP DGSYKAT+Y SPYFG+SI F Sbjct: 459 YGSLTGHILQKVQLGGSILLPDDVSETAPAVVRLNADVDRLGDKVSIHGSYVKGNLSTLKDAFKLDERSLVKVRFIYHLNRFLAAGVDYYWAFAPTADGSYKATQYFSPYFGVSIKF 575
BLAST of mRNA_C-australica_Contig_9942.2.1 vs. uniprot
Match: A0A2D6AQG2_9BACT (Uncharacterized protein n=3 Tax=Bacteria TaxID=2 RepID=A0A2D6AQG2_9BACT) HSP 1 Score: 189 bits (481), Expect = 5.860e-55 Identity = 89/117 (76.07%), Postives = 101/117 (86.32%), Query Frame = 1 Query: 1 YGSLQGHILPKVQLGGSLMIPDEISEEAPAVVRLNADLERLADKVSLHASYIKGNLATLKDAFIFDENSLAKIRFIYHMNKFLAVGMDYYWAFAPADDGSYKATRYISPYFGLSIAF 351 YGSL G IL KVQ+GGSLM+PD IS+E PA VR+NAD++RL DKVS+HASYIKGNL+TL+D F FDE SLAK+RFIYHMNKFLA G+DYYWAF P DG YKA +YISPYFGLSIAF Sbjct: 496 YGSLTGQILQKVQIGGSLMLPDNISDETPATVRVNADIDRLGDKVSMHASYIKGNLSTLQDTFTFDERSLAKVRFIYHMNKFLAAGIDYYWAFTPTADGGYKAEKYISPYFGLSIAF 612
BLAST of mRNA_C-australica_Contig_9942.2.1 vs. uniprot
Match: A0A3D9KZQ5_MARFU (Uncharacterized protein n=1 Tax=Marinoscillum furvescens DSM 4134 TaxID=1122208 RepID=A0A3D9KZQ5_MARFU) HSP 1 Score: 184 bits (467), Expect = 5.230e-53 Identity = 87/117 (74.36%), Postives = 100/117 (85.47%), Query Frame = 1 Query: 1 YGSLQGHILPKVQLGGSLMIPDEISEEAPAVVRLNADLERLADKVSLHASYIKGNLATLKDAFIFDENSLAKIRFIYHMNKFLAVGMDYYWAFAPADDGSYKATRYISPYFGLSIAF 351 YGSL GHIL KV+LGG+LM+PDEIS+E PA VR+NADL+RLADK S H SYIKGNL+TL +AF FDE SLAK+R IYH+NKFLA G+DYYWAF P DGSYK T+Y+SPYFGLSI F Sbjct: 483 YGSLTGHILHKVRLGGALMLPDEISDENPATVRVNADLDRLADKFSFHGSYIKGNLSTLDEAFTFDERSLAKLRVIYHLNKFLAAGLDYYWAFTPTADGSYKPTKYVSPYFGLSIDF 599
BLAST of mRNA_C-australica_Contig_9942.2.1 vs. uniprot
Match: A0A654DYT3_9BACT (Uncharacterized protein n=1 Tax=Marinoscillum sp. 108 TaxID=2653151 RepID=A0A654DYT3_9BACT) HSP 1 Score: 177 bits (450), Expect = 1.430e-50 Identity = 83/117 (70.94%), Postives = 94/117 (80.34%), Query Frame = 1 Query: 1 YGSLQGHILPKVQLGGSLMIPDEISEEAPAVVRLNADLERLADKVSLHASYIKGNLATLKDAFIFDENSLAKIRFIYHMNKFLAVGMDYYWAFAPADDGSYKATRYISPYFGLSIAF 351 YGSL GHIL KVQLGGSLMIPD+++E PA VR+NADL+RLADK S H SYIKGNL L D F FDE SLAK+R IYH+NKFLA G DYYWAF P DG YK T+Y+SPYFG+S+ F Sbjct: 478 YGSLTGHILKKVQLGGSLMIPDDVTEATPATVRVNADLDRLADKFSFHGSYIKGNLTDLGDTFKFDERSLAKLRVIYHLNKFLAAGFDYYWAFTPTADGGYKPTKYVSPYFGVSVQF 594
BLAST of mRNA_C-australica_Contig_9942.2.1 vs. uniprot
Match: A0A239H681_9BACT (Uncharacterized protein n=1 Tax=Ekhidna lutea TaxID=447679 RepID=A0A239H681_9BACT) HSP 1 Score: 164 bits (415), Expect = 9.580e-46 Identity = 76/116 (65.52%), Postives = 93/116 (80.17%), Query Frame = 1 Query: 1 YGSLQGHILPKVQLGGSLMIPDEISEEAPAVVRLNADLERLADKVSLHASYIKGNLATLKDAFIFDENSLAKIRFIYHMNKFLAVGMDYYWAFAPADDGSYKATRYISPYFGLSIA 348 YGSL+GH+L KV LGGSLMIPD+IS +PA V L AD+ERLADK S H +Y+KG+L L DAF DE SLAK+RFIYHMNKFLA G+DYYW F P +G ++AT+Y+ PYFG+SI+ Sbjct: 438 YGSLRGHVLKKVSLGGSLMIPDDISASSPAFVELTADMERLADKFSFHGNYVKGDLDDLGDAFKLDERSLAKMRFIYHMNKFLATGVDYYWLFTPTAEGGFEATKYVMPYFGVSIS 553
BLAST of mRNA_C-australica_Contig_9942.2.1 vs. uniprot
Match: UPI000D6E3FB8 (hypothetical protein n=1 Tax=Reichenbachiella versicolor TaxID=1821036 RepID=UPI000D6E3FB8) HSP 1 Score: 162 bits (411), Expect = 3.950e-45 Identity = 76/115 (66.09%), Postives = 94/115 (81.74%), Query Frame = 1 Query: 1 YGSLQGHILPKVQLGGSLMIPDEISEEAPAVVRLNADLERLADKVSLHASYIKGNLATLKDAFIFDENSLAKIRFIYHMNKFLAVGMDYYWAFAPADDGSYKATRYISPYFGLSI 345 YGSL GHIL V LGGSLM+PD+ISE +PA V L+AD++RLA+K S+HA+Y KG L L DAF D+NSLAK+RF YHMNKF+ +G+DY+W F P DDG YKATRY+SP+FG+SI Sbjct: 445 YGSLTGHILKIVSLGGSLMLPDDISESSPATVTLHADVDRLANKFSIHANYFKGGLTDLNDAFKLDDNSLAKVRFAYHMNKFMVMGVDYFWTFTPTDDG-YKATRYVSPFFGVSI 558
BLAST of mRNA_C-australica_Contig_9942.2.1 vs. uniprot
Match: A0A1W2G5P5_9BACT (Uncharacterized protein n=1 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2G5P5_9BACT) HSP 1 Score: 155 bits (393), Expect = 1.800e-42 Identity = 75/115 (65.22%), Postives = 92/115 (80.00%), Query Frame = 1 Query: 1 YGSLQGHILPKVQLGGSLMIPDEISEEAPAVVRLNADLERLADKVSLHASYIKGNLATLKDAFIFDENSLAKIRFIYHMNKFLAVGMDYYWAFAPADDGSYKATRYISPYFGLSI 345 YGSL+GHIL K+ LGGSLMIPDEISE APAVV LNAD++RL +K S+HA Y KG L L DAF DE SLAK+RF+YH+NKFL G+DY+++F + G YK T+Y+SPYFG+SI Sbjct: 457 YGSLKGHILKKLTLGGSLMIPDEISETAPAVVTLNADVDRLFNKFSMHARYYKGGLTDLGDAFSLDERSLAKVRFVYHLNKFLVTGVDYFYSFTATESG-YKTTKYVSPYFGVSI 570
BLAST of mRNA_C-australica_Contig_9942.2.1 vs. uniprot
Match: A0A1M6JEY7_9BACT (Uncharacterized protein n=3 Tax=Reichenbachiella TaxID=156993 RepID=A0A1M6JEY7_9BACT) HSP 1 Score: 155 bits (393), Expect = 2.410e-42 Identity = 72/117 (61.54%), Postives = 91/117 (77.78%), Query Frame = 1 Query: 1 YGSLQGHILPKVQLGGSLMIPDEISEEAPAVVRLNADLERLADKVSLHASYIKGNLATLKDAFIFDENSLAKIRFIYHMNKFLAVGMDYYWAFAPADDGSYKATRYISPYFGLSIAF 351 YGS+ GHIL KV +GGSL++PD I E APAVV L AD++RL DKVS+HA Y KG L L DAF DE SLAK+RF+YH+N+F+ G+DY++ F P ++G Y+ T+YISPYFGLSI F Sbjct: 483 YGSITGHILQKVNIGGSLLLPDHIGEAAPAVVTLTADVDRLFDKVSIHAKYFKGGLTELNDAFTLDERSLAKVRFVYHLNRFIVAGVDYFYTFTPTENG-YETTQYISPYFGLSIQF 598
BLAST of mRNA_C-australica_Contig_9942.2.1 vs. uniprot
Match: A0A2E9G4G7_9RHOB (Uncharacterized protein n=1 Tax=Thalassobius sp. TaxID=1979401 RepID=A0A2E9G4G7_9RHOB) HSP 1 Score: 127 bits (318), Expect = 4.970e-32 Identity = 59/115 (51.30%), Postives = 82/115 (71.30%), Query Frame = 1 Query: 1 YGSLQGHILPKVQLGGSLMIPDEISEEAPAVVRLNADLERLADKVSLHASYIKGNLATLKDAFIFDENSLAKIRFIYHMNKFLAVGMDYYWAFAPADDGSYKATRYISPYFGLSI 345 YG L +L KV++ GSL++PD +SEE PA+++LNA+L + DK+SL A+YIK NL L+D + D+ SLA++R Y +NKFL VG DY W +A +DGS+KA Y PYFG S+ Sbjct: 383 YGVLSATLLDKVRVSGSLLMPDVVSEETPALMQLNAELINMFDKLSLKATYIKSNLVDLEDVIMLDDRSLARMRMSYQLNKFLVVGADYQWTYALQEDGSFKADHYFMPYFGFSL 497 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9942.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9942.2.1 >prot_C-australica_Contig_9942.2.1 ID=prot_C-australica_Contig_9942.2.1|Name=mRNA_C-australica_Contig_9942.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=118bp YGSLQGHILPKVQLGGSLMIPDEISEEAPAVVRLNADLERLADKVSLHASback to top mRNA from alignment at C-australica_Contig_9942:496..849- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_9942.2.1 ID=mRNA_C-australica_Contig_9942.2.1|Name=mRNA_C-australica_Contig_9942.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=354bp|location=Sequence derived from alignment at C-australica_Contig_9942:496..849- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_9942:496..849- >mRNA_C-australica_Contig_9942.2.1 ID=mRNA_C-australica_Contig_9942.2.1|Name=mRNA_C-australica_Contig_9942.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=354bp|location=Sequence derived from alignment at C-australica_Contig_9942:496..849- (Chrysoparadoxa australica CS_1217)back to top |