mRNA_C-australica_Contig_993.5.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_993.5.1
Unique NamemRNA_C-australica_Contig_993.5.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_993.5.1 vs. uniprot
Match: A0A7R9UBX0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UBX0_9STRA)

HSP 1 Score: 173 bits (438), Expect = 1.940e-49
Identity = 100/216 (46.30%), Postives = 132/216 (61.11%), Query Frame = 2
Query:   62 KMPQLKLTYFPIAGRAEATRLAFTIGGIEFCDHTVTFQEFAPLKPT--LPTGQLPVLEVDGATIAQSAAILRYAGKLAGLYPEDPLEALKVDEIMDTLEDSGAGLRGTMRLK--------DEEEKKAKRLQFVKEDMPVWFGRLTTLCEKYGCGSGYAVGSSLTIADLAVYATVHHYTSGFIDYIPTDVVDAYPYIKGIYDKVLANPKVAEYYAAK 679
            KM  +KLTYF   GRAE TRLA  IGGI+F +H ++F++F  +K +  LP GQ+P+LE+DG    QS + LRY GKLAGLYPEDPLEAL+VD  +D  ED    +  T+  K        DE+EKKA R Q   E +P    +L       G  +G+ VG S TIADL  Y  ++   SG +DY+P  ++DAYP  KG+ DKV + P V  +Y A+
Sbjct:   22 KMSTMKLTYFDFGGRAEYTRLACVIGGIDFENHLISFEQFGQMKASGELPHGQVPILEIDGVKYPQSNSQLRYVGKLAGLYPEDPLEALRVDAYVDFAEDMAVPVGATISRKRFGLPDFADEDEKKAAREQLAFELLPPLLQQLEKKLADNG--TGWCVGDSCTIADLRWYQPLNTVLSGTLDYVPPSILDAYPLAKGLVDKVKSIPAVHAWYEAE 235          
BLAST of mRNA_C-australica_Contig_993.5.1 vs. uniprot
Match: A0A7S2V6C7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6C7_9STRA)

HSP 1 Score: 169 bits (427), Expect = 3.450e-48
Identity = 91/203 (44.83%), Postives = 126/203 (62.07%), Query Frame = 2
Query:   74 LKLTYFPIAGRAEATRLAFTIGGIEFCDHTVTFQEFAPLKPTLPTGQLPVLEVDGATIAQSAAILRYAGKLAGLYPEDPLEALKVDEIMDTLEDSGAGLRGTMRLKDEEEKKAKRLQFVKEDMPVWFGRLTTLCEKYGCGSGYAVGSSLTIADLAVYATVHHYTSGFIDYIPTDVVDAYPYIKGIYDKVLANPKVAEYYAAKK 682
            +KLTYFP+ GRA  TRLAF +GG++F D  V  ++F  +K +LP  QLPVLEV+G T  +S AILRYAGKL+GLYP DP+EALK D ++D ++ +G  +  T+R  D E+K   R +   + +P  FG L     K+G    + +G  LTIADL +   V   T G +D IP   +D +  +K I +    + KVAEYYA+ K
Sbjct:   12 IKLTYFPLPGRAGYTRLAFYVGGVDFEDVIVKGEDFQAMKDSLPGKQLPVLEVNGVTYCESMAILRYAGKLSGLYPSDPVEALKCDMLIDMIQGAGNKVAATIREPDAEKKMKMREELASQTLPTLFGYLEEQLNKFG--GNFCIGDQLTIADLELLIKVTWLTKGILDGIPPSWIDPFTKVKAIVEATKNHEKVAEYYASGK 212          
BLAST of mRNA_C-australica_Contig_993.5.1 vs. uniprot
Match: A0A061SAH2_9CHLO (Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAH2_9CHLO)

HSP 1 Score: 166 bits (420), Expect = 3.040e-47
Identity = 92/205 (44.88%), Postives = 124/205 (60.49%), Query Frame = 2
Query:   71 QLKLTYFPIAGRAEATRLAFTIGGIEFCDHTVTFQEFAPLKPTLPTGQLPVLEVDGATIAQSAAILRYAGKLAGLYPEDPLEALKVDEIMDTLEDSGAGLRGTMRLKDEEEKKAKRLQFVKEDMPVWFGRLTTLCEKYGCGSGYAVGSSLTIADLAVYATVHHYTSGFIDYIPTDVVDAYPYIKGIYDKVLANPKVAEYYAAKKK 685
            Q KL+YF   G AE  RLAF +GGI+F DH    +++  LKP  P G +P L +     AQS AILRYAGKLAGLYP DP+EAL VD+I+D LED    ++ T++ +DE++K   R    +E +P W G      E+ G  SGY VG SLTIADL +Y  +   TSG +D IP  + + +P +  + +KV A+ KV  + A   K
Sbjct:    2 QQKLSYFDFKGVAEPIRLAFAVGGIDFEDHRFQREDWPQLKPKTPYGSVPTLTIGDRVYAQSNAILRYAGKLAGLYPTDPVEALAVDQIVDALEDMFLHVKPTVQEQDEKKKMEMRKVLAEETLPKWLGYFNKHIEENG-SSGYIVGDSLTIADLKLYTLIGLLTSGMLDGIPKTIAEPFPKVTALLEKVGADEKVKAFEAKHAK 205          
BLAST of mRNA_C-australica_Contig_993.5.1 vs. uniprot
Match: A0A1V9YVK9_9STRA (Glutathione S-transferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YVK9_9STRA)

HSP 1 Score: 164 bits (414), Expect = 2.570e-46
Identity = 96/205 (46.83%), Postives = 127/205 (61.95%), Query Frame = 2
Query:   68 PQLKLTYFPIAGRAEATRLAFTIGGIEFCDHTVTFQEFAPLKPTLPTGQLPVLEVDGATIAQSAAILRYAGKLAGLYPEDPLEALKVDEIMDTLEDSGAGLRGTMRLKDEEEKKAKRLQFVKEDMPVWFGRLTTLCEKYGCGSGYAVGSSLTIADLAVYATVHHYTSGFIDYIPTDVVDAYPYIKGIYDKVLANPKVAEYYAAKK 682
            P LK+TYF + GRAE TRLA  IG I F D  +T + FA LKPTLP  Q+PVL VDG  +AQS A+ RYAG+LAGLYP D LEA +VDEI+   +D+ A L  + R +D  ++   R +     +P  F  +      +     Y +G +LTIADL +Y +    +SG++D IPTD++DAYP    I D V A+PKVA + AA K
Sbjct:    4 PTLKITYFDMTGRAELTRLALHIGDIPFEDDRLTREAFAALKPTLPFKQVPVLTVDGEVLAQSHAMARYAGRLAGLYPTDALEAFRVDEILAASDDTLAKLMPSFREQDAAKRLVLREELSAGPLPEHFACIEARLAAHK--GPYFLGDALTIADLELYGSRQMLSSGWLDGIPTDILDAYPRWNAIADAVAAHPKVAAWEAAHK 206          
BLAST of mRNA_C-australica_Contig_993.5.1 vs. uniprot
Match: K3W6R3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6R3_GLOUD)

HSP 1 Score: 169 bits (427), Expect = 5.820e-46
Identity = 95/205 (46.34%), Postives = 128/205 (62.44%), Query Frame = 2
Query:   68 PQLKLTYFPIAGRAEATRLAFTIGGIEFCDHTVTFQEFAPLKPTLPTGQLPVLEVDGATIAQSAAILRYAGKLAGLYP-EDPLEALKVDEIMDTLEDSGAGLRGTMRLKDEEEKKAKRLQFVKEDMPVWFGRLTTLCEKYGCGSGYAV--GSSLTIADLAVYATVHHYTSGFIDYIPTDVVDAYPYIKGIYDKVLANPKVAEYYA 673
            P+LKLTYFPI  RA ATRLAF IGG+ F D  +    F   KPT P GQ+PVLEVDG   AQS A+LRYAG+LA LYP  DPL ALK+DEI++ +E+    +    R +D E+KK  RL    + +P +   + +  + +     YAV     + I+D+A+YA V    +G+ID+IPT V D YP ++  + KV  +PKV E+YA
Sbjct:    5 PKLKLTYFPIEARAAATRLAFYIGGVPFVDERLDHDTFTANKPTYPFGQVPVLEVDGHVFAQSQAMLRYAGRLAKLYPTNDPLAALKIDEILNGIEELNEKMVPAFREQDPEKKKQLRLDLANDTIPRYLSIIESRLKTH---EKYAVLQTKDVHISDIAIYAWVKSLRAGYIDHIPTTVADGYPLVEASFQKVANHPKVVEWYA 206          
BLAST of mRNA_C-australica_Contig_993.5.1 vs. uniprot
Match: UPI001B81D59D (glutathione S-transferase n=1 Tax=Undibacterium fentianense TaxID=2828728 RepID=UPI001B81D59D)

HSP 1 Score: 161 bits (408), Expect = 1.970e-45
Identity = 95/206 (46.12%), Postives = 126/206 (61.17%), Query Frame = 2
Query:   65 MPQLKLTYFPI-AGRAEATRLAFTIGGIEFCDHTVTFQEFAPLKPTLPTGQLPVLEVDGATIAQSAAILRYAGKLAGLYPEDPLEALKVDEIMDTLEDSGAGLRGTMRLKDEEEKKAKRLQFVKEDMPVWFGRLTTLCEKYGCGSG-YAVGSSLTIADLAVYATVHHYTSGFIDYIPTDVVDAY-PYIKGIYDKVLANPKVAEYYA 673
            MP+LK+TYF    GRAE  RLA  IGG+ F DH  ++ EFA ++   P GQ+PVLEVDG  I Q  A+LRYAGKLAGLYP D L+AL  DE+M  +E++G  +  T R+  EE+K A RL  V   +PV+   LT L +K   G G Y     LT+ADL V+  +    SG +D+IPTD+V+   P +     +V  +P +  YYA
Sbjct:    1 MPKLKITYFDFHGGRAEPVRLALAIGGVPFEDHRFSYPEFAEVRKNTPFGQVPVLEVDGEQITQCDAMLRYAGKLAGLYPSDALQALVCDEVMFVIEEAGIKMGPTYRMSGEEQKAA-RLALVNSSIPVY---LTWLEKKLAAGGGEYFADHRLTVADLKVFIDIRTLNSGRLDHIPTDLVEKVAPSLNAHMKRVAEHPAIVAYYA 202          
BLAST of mRNA_C-australica_Contig_993.5.1 vs. uniprot
Match: UPI001B820D64 (glutathione S-transferase n=2 Tax=Undibacterium TaxID=401469 RepID=UPI001B820D64)

HSP 1 Score: 160 bits (406), Expect = 3.930e-45
Identity = 92/205 (44.88%), Postives = 124/205 (60.49%), Query Frame = 2
Query:   65 MPQLKLTYFPI-AGRAEATRLAFTIGGIEFCDHTVTFQEFAPLKPTLPTGQLPVLEVDGATIAQSAAILRYAGKLAGLYPEDPLEALKVDEIMDTLEDSGAGLRGTMRLKDEEEKKAKRLQFVKEDMPVWFGRLTTLCEKYGCGSGYAVGSSLTIADLAVYATVHHYTSGFIDYIPTDVVDAY-PYIKGIYDKVLANPKVAEYYA 673
            MP+LK+TYF +  GRAE  RLA  IGG++F DH   + EFA ++ T P GQ+P LEVDG  I Q  ++LRYAGKLAGLYPED  +AL  DE+M  +E++G  +  T R+  EE+K A RL  V   MPV+   L    +  G    Y   + LT+ADL V+  V    SG +D+IPTD+V+   P +     ++  +P V  YYA
Sbjct:    1 MPKLKITYFDMHGGRAEPVRLALAIGGVDFEDHRFAYPEFAAVRKTTPFGQVPTLEVDGVQITQCDSMLRYAGKLAGLYPEDAYQALLCDEVMYVVEEAGVKMGPTYRMTGEEQKAA-RLALVNSSMPVYLAWLEKKLQANG--GNYFADNRLTVADLKVFVDVRTLNSGRLDHIPTDLVEKVAPALNAHAKRIAEHPAVVAYYA 202          
BLAST of mRNA_C-australica_Contig_993.5.1 vs. uniprot
Match: A0A1S8VHC2_9FUNG (Uncharacterized protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8VHC2_9FUNG)

HSP 1 Score: 160 bits (406), Expect = 4.700e-45
Identity = 92/209 (44.02%), Postives = 130/209 (62.20%), Query Frame = 2
Query:   65 MPQLKLTYFPIAGRAEATRLAFTIGGIEFCDHTVTFQEFAPLKPTLPTGQLPVLEVDGAT-IAQSAAILRYAGKLAGLYPE-DPLEALKVDEIMDTLEDSGAGLRGTMRLKDEEEKKAKRLQFVKEDMPVWFGRLTTLCEKYGCGSGYAVGSSLTIADLAVYATVHHYTSGFIDYIPTDVVDAYPYIKGIYDKVLANPKVAEYYAAKKK 685
            +P LKLTYF I  RAEA+RLA  +GG+ F D  V+ + +  +K   P GQLP+L ++G+T IAQS AILRYAG L GLYP  DP++A  VD+I+  +ED    +  T+R KD E K  +R    ++  P  F  L  + EK+  G  +AVG S+++ADLA+Y  +    +G  D +P DV D++  +  +Y  VL +PKVAE+ AA  K
Sbjct:    5 LPSLKLTYFGIRARAEASRLALYVGGVPFEDERVSGEGWGAMKQATPFGQLPLLTINGSTQIAQSNAILRYAGSLGGLYPAADPIKAALVDQIVMHIEDMSNTVYSTVREKDPEVKMQQRKVIAQDKYPAMFKSLEQVIEKHSSGK-WAVGDSISVADLAIYVLIVLIKTGIWDGVPVDVADSFVRVSAVYTAVLTHPKVAEWEAAHAK 212          
BLAST of mRNA_C-australica_Contig_993.5.1 vs. uniprot
Match: A0A4P9YKU6_ROZAC (Glutathione S-transferase n=2 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A4P9YKU6_ROZAC)

HSP 1 Score: 159 bits (403), Expect = 1.170e-44
Identity = 91/202 (45.05%), Postives = 125/202 (61.88%), Query Frame = 2
Query:   74 LKLTYFPIAGRAEATRLAFTIGGIEFCDHTVTFQEFAPLKPTLPTGQLPVLEVDGATIAQSAAILRYAGKLAGLYPE-DPLEALKVDEIMDTLEDSGAGLRGTMRLKDEEEKKAKRLQFVKEDMPVWFGRLTTLCEKYGCGSGYAVGSSLTIADLAVYATVHHYTSGFIDYIPTDVVDAYPYIKGIYDKVLANPKVAEYYAA 676
            +KLTYF   GRAE  RLAF IGG+ F D  V  +EFA +KPTLP GQLP++ +DG  IAQS  ILRYAG L GLYP  DPL+AL VD+I+ +L D    L  T  ++D +++   R + V+   P  F  +    +K+G    Y VG +LT+ADL++Y  V    SG +D +P +VV+ YP +    ++V  +PKV E+  A
Sbjct:    7 IKLTYFAGKGRAEPIRLAFHIGGVAFQDERVKGEEFAKIKPTLPLGQLPIITIDGTVIAQSLGILRYAGTLTGLYPNNDPLKALLVDQIVFSLGDVTDMLAPTFGIQDLDQRIKARKEIVENRWPALFKGIEEALKKHG--GKYCVGDNLTVADLSLYTLVEGLKSGILDGVPKNVVEPYPLMTKFSNQVANHPKVVEWEKA 206          
BLAST of mRNA_C-australica_Contig_993.5.1 vs. uniprot
Match: B1N8I2_CHOCR (Glutathione S-transferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=B1N8I2_CHOCR)

HSP 1 Score: 159 bits (403), Expect = 1.250e-44
Identity = 91/200 (45.50%), Postives = 127/200 (63.50%), Query Frame = 2
Query:   71 QLKLTYFPIAGRAEATRLAFTIGGIEFCDHTVTFQEFAPLKPTLPTGQLPVLEVDGATIAQSAAILRYAGKLAGLYPEDPLEALKVDEIMDTLEDSGAGLRGTMRLKDEEEKKAKRLQFVKEDMPVWFGRLTTLCEKYGCGSGYAVGSSLTIADLAVYATVHHYTSGFIDYIPTDVVDAYPYIKGIYDKVLANPKVAEYY 670
            +LKL+YF ++GR EA RLA  IG +EF + T  F E+A  KP  P G +PV  VDG   AQS AILRY G++AGLYP     ALKVDE+MDT  D    + G    + EE+ +A+R +FV  ++P + G +    E++G G  YAV  +LT+ADLA+YA     TSG++D++P DV+D Y  +  + + V  +PKV E+Y
Sbjct:    5 ELKLSYFGVSGRGEAARLALAIGDVEFENDTFGFGEWAARKPNTPYGSVPVFYVDGMVHAQSNAILRYCGRVAGLYPGCVKHALKVDELMDTTSDV-ITISGRGSGEGEEKLRAERKKFVDVEIPRYCGGIEKRLEQFGDGP-YAVTENLTVADLAIYAMYLMLTSGYLDHVPKDVLDKYTRLTKVCNTVKEHPKVVEWY 202          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_993.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7R9UBX0_9STRA1.940e-4946.30Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2V6C7_9STRA3.450e-4844.83Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A061SAH2_9CHLO3.040e-4744.88Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis s... [more]
A0A1V9YVK9_9STRA2.570e-4646.83Glutathione S-transferase n=1 Tax=Achlya hypogyna ... [more]
K3W6R3_GLOUD5.820e-4646.34Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
UPI001B81D59D1.970e-4546.12glutathione S-transferase n=1 Tax=Undibacterium fe... [more]
UPI001B820D643.930e-4544.88glutathione S-transferase n=2 Tax=Undibacterium Ta... [more]
A0A1S8VHC2_9FUNG4.700e-4544.02Uncharacterized protein n=1 Tax=Batrachochytrium s... [more]
A0A4P9YKU6_ROZAC1.170e-4445.05Glutathione S-transferase n=2 Tax=Rozella allomyci... [more]
B1N8I2_CHOCR1.250e-4445.50Glutathione S-transferase n=1 Tax=Chondrus crispus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_993contigC-australica_Contig_993:3019..4872 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog65071.PYU1_T000654
PFAMsGST_C_3,GST_N
Model size878
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons9
Evalue8.59e-48
EggNOG OGsKOG1695@1|root,KOG1695@2759|Eukaryota,1MFV7@121069|Pythiales
DescriptionGlutathione S-transferase. Source PGD
Cds size624
COG categoryO
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_993.5.1prot_C-australica_Contig_993.5.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_993 3209..4808 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588861.4334457-UTR-C-australica_Contig_993:3018..32081682588861.4334457-UTR-C-australica_Contig_993:3018..3208Chrysoparadoxa australica CS_1217UTRC-australica_Contig_993 3019..3208 -
1682588861.5422187-UTR-C-australica_Contig_993:4808..48721682588861.5422187-UTR-C-australica_Contig_993:4808..4872Chrysoparadoxa australica CS_1217UTRC-australica_Contig_993 4809..4872 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588861.4441009-CDS-C-australica_Contig_993:3208..32411682588861.4441009-CDS-C-australica_Contig_993:3208..3241Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 3209..3241 -
1682588861.4529488-CDS-C-australica_Contig_993:3388..34381682588861.4529488-CDS-C-australica_Contig_993:3388..3438Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 3389..3438 -
1682588861.4624066-CDS-C-australica_Contig_993:3565..36151682588861.4624066-CDS-C-australica_Contig_993:3565..3615Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 3566..3615 -
1682588861.4723969-CDS-C-australica_Contig_993:3728..37991682588861.4723969-CDS-C-australica_Contig_993:3728..3799Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 3729..3799 -
1682588861.4827209-CDS-C-australica_Contig_993:3883..39431682588861.4827209-CDS-C-australica_Contig_993:3883..3943Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 3884..3943 -
1682588861.4939177-CDS-C-australica_Contig_993:4022..41121682588861.4939177-CDS-C-australica_Contig_993:4022..4112Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 4023..4112 -
1682588861.5087633-CDS-C-australica_Contig_993:4325..43951682588861.5087633-CDS-C-australica_Contig_993:4325..4395Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 4326..4395 -
1682588861.5200412-CDS-C-australica_Contig_993:4502..46461682588861.5200412-CDS-C-australica_Contig_993:4502..4646Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 4503..4646 -
1682588861.53067-CDS-C-australica_Contig_993:4752..48081682588861.53067-CDS-C-australica_Contig_993:4752..4808Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 4753..4808 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_993.5.1

>prot_C-australica_Contig_993.5.1 ID=prot_C-australica_Contig_993.5.1|Name=mRNA_C-australica_Contig_993.5.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=208bp
MPQLKLTYFPIAGRAEATRLAFTIGGIEFCDHTVTFQEFAPLKPTLPTGQ
LPVLEVDGATIAQSAAILRYAGKLAGLYPEDPLEALKVDEIMDTLEDSGA
GLRGTMRLKDEEEKKAKRLQFVKEDMPVWFGRLTTLCEKYGCGSGYAVGS
SLTIADLAVYATVHHYTSGFIDYIPTDVVDAYPYIKGIYDKVLANPKVAE
YYAAKKK*
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mRNA from alignment at C-australica_Contig_993:3019..4872-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_993.5.1 ID=mRNA_C-australica_Contig_993.5.1|Name=mRNA_C-australica_Contig_993.5.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1854bp|location=Sequence derived from alignment at C-australica_Contig_993:3019..4872- (Chrysoparadoxa australica CS_1217)
CTTCCATTTGCGCATTTGCACTTGCTCCCAATTGACTTAGACCAGCTTCA AGCCACCAAGAAAGATGCCTCAGCTCAAGCTCACCTACTTTCCCATTGCC GGCAGGGCTGAAGCCACCAGGTGCAATAAGCATACGCTCCCTACCTACCT ACCCCTACCTACCCCTGCCTGCTGCGATGTTCTCATCCCTCCTCCCCTCC CCGCCCTCCCTCTGCTGCCCTCCTAGGCTGGCCTTCACCATCGGTGGTAT TGAGTTCTGCGACCACACCGTCACCTTTCAAGAGTTCGCTCCGCTCAAGC CTACCCTGCCCACTGGCCAGCTACCAGTCCTTGAGGTGGATGGCGCCACC ATTGCACAGAGCGCCGCCATGTAAGTGATCCATATATTTCTGAAAGATAA GTGCCAGTGCTAGCTCCTACTCCGTGTGCTCATAATGGAGTGGCATTGCA GTGACCCCGCCTCATCTCCCTCTTCAGCCTGAGATATGCCGGAAAGCTGG CCGGGTTGTACCCTGAGGATCCTCTAGAAGCACTGAAGGTTGATGAGGTA AGCAAGCAAGGCACCAAGTCAACTTGAATGAAAAACTTTTTGCTTTGCCC ATGGTATTGAATTTAAATTCCAAACCAACTTGGTAGAAAGCCAATCCACA TACAACAGATTTAACCCTATACGAGTTGTGCTCAGATATGAAGCTCCTTT TCTATACCTGCCAGCAGTCATGACCACCCCCTCTATGCTGCTGTGCTTTT TCCAACGTAGATTATGGATACTCTTGAAGACTCTGGTGCTGGCTTGAGGG GAACCATGAGGCTCAAGGACGAAGAGGAGAAGAAGGCCAAGAGGCTGCAG GTAAACGAACAAATGAATGATATGCTTCAGTCACTCGATCTTCACTCCTG AAAACTGATCACTCCTCCCCTGTTGGCAGTTTGTTAAGGAGGACATGCCT GTATGGTTTGGAAGGTTGACTACCCTCTGCGAGAAATACGTGAGTGCGGA TAGATGCCACCGGCAGACCAACAGACCAGACGCCACTGACTGACTCTCTC TCTCACTCTCACGCTATGCTCAGGGCTGTGGGTCTGGCTACGCAGTCGGC TCCAGCCTAACCATTGCAGACCTCGCTGTGTACGCTACTGTCCAGTGAGT CCATAGTCAGCCTACATTTCTCTCACATGATGTGGAATATTCGTGGAGAC AACTCAGACAGTCAATGCCCTGCTCTTACCTGACTTCTTTGTTTGCTCCA CTCGCAGCCACTATACCAGCGGGTTCATTGACTACATCCCCACCGATGTC GTGGATGGTAAGCTGACTTACTTATGCTTATGTTGCCCAGCTGACATGCC GGAATTCACGATAGCTTCCCAGGCAAGACAAGATGAGACATCTCATAACA AGCCTAATGCCTCGCCCTTCCCCCACAATCTCAGCCTACCCTTACATCAA GGGAATTTACGACAAGGTCCTTGCCAACCCAAAGGTGAGTAACGTTAATA ACTTTAATAGCGTTTTTATCACATATAACATCAATAACTTTAGTAATTTG GCTGCTGCAGTTGGATACTTTCGGTTCCCATGAATTAGATTAACCCATCC CTCACCTACCTACCCCTGGACCTGACCATAGGTTGCCGAGTACTACGCAG CCAAGAAGAAGTAAGGCTGAGGTAGAGCCGAAGGGGCTCTGCATTTTTGG GGGAGCTCTCGTACGGATGGATCTGGTCTTGACAGCGGAACATTGAGTCT GGCTGTGCAGTGATTTCGGCTCGGGGCTCCTGCCCGCATGGGCGTAGGTA GTGATGTAGGGCAGCACGCCGGGTAGCGATAATAAACGTATACAGTACAT CATC
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Coding sequence (CDS) from alignment at C-australica_Contig_993:3019..4872-

>mRNA_C-australica_Contig_993.5.1 ID=mRNA_C-australica_Contig_993.5.1|Name=mRNA_C-australica_Contig_993.5.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=624bp|location=Sequence derived from alignment at C-australica_Contig_993:3019..4872- (Chrysoparadoxa australica CS_1217)
ATGCCTCAGCTCAAGCTCACCTACTTTCCCATTGCCGGCAGGGCTGAAGC
CACCAGGCTGGCCTTCACCATCGGTGGTATTGAGTTCTGCGACCACACCG
TCACCTTTCAAGAGTTCGCTCCGCTCAAGCCTACCCTGCCCACTGGCCAG
CTACCAGTCCTTGAGGTGGATGGCGCCACCATTGCACAGAGCGCCGCCAT
CCTGAGATATGCCGGAAAGCTGGCCGGGTTGTACCCTGAGGATCCTCTAG
AAGCACTGAAGGTTGATGAGATTATGGATACTCTTGAAGACTCTGGTGCT
GGCTTGAGGGGAACCATGAGGCTCAAGGACGAAGAGGAGAAGAAGGCCAA
GAGGCTGCAGTTTGTTAAGGAGGACATGCCTGTATGGTTTGGAAGGTTGA
CTACCCTCTGCGAGAAATACGGCTGTGGGTCTGGCTACGCAGTCGGCTCC
AGCCTAACCATTGCAGACCTCGCTGTGTACGCTACTGTCCACCACTATAC
CAGCGGGTTCATTGACTACATCCCCACCGATGTCGTGGATGCCTACCCTT
ACATCAAGGGAATTTACGACAAGGTCCTTGCCAACCCAAAGGTTGCCGAG
TACTACGCAGCCAAGAAGAAGTAA
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