mRNA_C-australica_Contig_993.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_993.1.1
Unique NamemRNA_C-australica_Contig_993.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
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BLAST of mRNA_C-australica_Contig_993.1.1 vs. uniprot
Match: F0YHG2_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHG2_AURAN)

HSP 1 Score: 473 bits (1216), Expect = 3.220e-165
Identity = 231/267 (86.52%), Postives = 246/267 (92.13%), Query Frame = 1 
Query:    1 AVSWRSEVIKHRKNEIFLDVVEKLNLLVGGNGTVLHSEIMGAVKMKSFLSGMPELKLGLNDKVMFEGTGRGSSKGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPTDVDSPSFKSSIGTVSYMPGEDAIVWSIKQFNGGREYLMRAHFGLPK--------WKKPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQHGDYQ 777
            AVSWRSE IKHRKNEIFLDV+E+LNLLV GNGTVL+SEI+GA+KMKSFLSGMPELKLGLNDK+MFE TGR  ++GKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRL+THVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRS+ANNV+IIIPVP DVDSPSFKSSIGTV+Y+P  + IVWSIKQFNG REYLMRAHFGLP         WK PI VKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQ+GDYQ
Sbjct:  154 AVSWRSEGIKHRKNEIFLDVIERLNLLVAGNGTVLNSEIIGAIKMKSFLSGMPELKLGLNDKLMFEATGRPMTRGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSVANNVDIIIPVPHDVDSPSFKSSIGTVTYLPDRNVIVWSIKQFNGAREYLMRAHFGLPSVSSEDPEHWKAPIEVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQ 420
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BLAST of mRNA_C-australica_Contig_993.1.1 vs. uniprot
Match: A0A6H5JE16_9PHAE (MHD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE16_9PHAE)

HSP 1 Score: 471 bits (1212), Expect = 1.400e-164
Identity = 231/267 (86.52%), Postives = 246/267 (92.13%), Query Frame = 1 
Query:    1 AVSWRSEVIKHRKNEIFLDVVEKLNLLVGGNGTVLHSEIMGAVKMKSFLSGMPELKLGLNDKVMFEGTGRGSSKGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPTDVDSPSFKSSIGTVSYMPGEDAIVWSIKQFNGGREYLMRAHFGLP--------KWKKPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQHGDYQ 777
            AVSWRSE IKHRKNEIFLDVVEKLNLL   NGTVLHSEI+GAVKMKSFLSGMPELKLGLNDK++FE +GR S   KAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVP DVDSP+FK+SIG+V+Y+P +DA+VWSIKQFNG +EYLMRAHFGLP        +WK PI+VKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQ+GDYQ
Sbjct:  156 AVSWRSEGIKHRKNEIFLDVVEKLNLLESSNGTVLHSEIVGAVKMKSFLSGMPELKLGLNDKLLFESSGRSSGTKKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPNDVDSPTFKASIGSVAYLPDQDAVVWSIKQFNGSQEYLMRAHFGLPSISAEDAREWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQ 422
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BLAST of mRNA_C-australica_Contig_993.1.1 vs. uniprot
Match: A0A7S2R9Z0_9STRA (Hypothetical protein n=3 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2R9Z0_9STRA)

HSP 1 Score: 471 bits (1213), Expect = 1.500e-164
Identity = 232/267 (86.89%), Postives = 245/267 (91.76%), Query Frame = 1 
Query:    1 AVSWRSEVIKHRKNEIFLDVVEKLNLLVGGNGTVLHSEIMGAVKMKSFLSGMPELKLGLNDKVMFEGTGRGSSKGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPTDVDSPSFKSSIGTVSYMPGEDAIVWSIKQFNGGREYLMRAHFGLPK--------WKKPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQHGDYQ 777
            AVSWRSE IKHRKNEIFLDVVEKLNLLV  NGTVL+SEI+GA+KMKSFLSGMPELKLGLNDK+MFE TGR  SKGKAVEL DIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRL+THVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVP+DVDSPSFK+SIGTV Y+P  DA+VW+IKQFNG REYLMRAHFGLP         W+ PI V+FEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQ+GDYQ
Sbjct:  168 AVSWRSEGIKHRKNEIFLDVVEKLNLLVSSNGTVLNSEIVGAIKMKSFLSGMPELKLGLNDKLMFEATGRPMSKGKAVELADIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLSTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPSDVDSPSFKASIGTVVYLPDRDAVVWTIKQFNGSREYLMRAHFGLPSVGAEEPEHWRAPIEVQFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQ 434
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BLAST of mRNA_C-australica_Contig_993.1.1 vs. uniprot
Match: A0A7R9UAB2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAB2_9STRA)

HSP 1 Score: 467 bits (1201), Expect = 2.670e-163
Identity = 228/267 (85.39%), Postives = 242/267 (90.64%), Query Frame = 1 
Query:    1 AVSWRSEVIKHRKNEIFLDVVEKLNLLVGGNGTVLHSEIMGAVKMKSFLSGMPELKLGLNDKVMFEGTGRGSSKGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPTDVDSPSFKSSIGTVSYMPGEDAIVWSIKQFNGGREYLMRAHFGLPK--------WKKPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQHGDYQ 777
            AVSWRSE I+HRKNEIFLDVVEKLNLLV  NGTVLHSEI+GA+KMKSFLSGMPELKLGLNDK+MFE TGR  S+GKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRL T VKPL+WVEAVVE HSHSRIEYMIKAKS FK+RS+ANNVEIIIPVP DVD+PSFKSSIG V+Y+P  DAIVW+IKQFNGGREYLMRAHFGLP         W+ PI VKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQ+GDYQ
Sbjct:  130 AVSWRSEGIRHRKNEIFLDVVEKLNLLVNSNGTVLHSEIVGAIKMKSFLSGMPELKLGLNDKLMFEATGRTMSRGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLNTQVKPLVWVEAVVESHSHSRIEYMIKAKSNFKTRSVANNVEIIIPVPNDVDTPSFKSSIGAVTYLPDRDAIVWTIKQFNGGREYLMRAHFGLPSVSSEDSEHWRAPIEVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQ 396
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BLAST of mRNA_C-australica_Contig_993.1.1 vs. uniprot
Match: A0A024TRG0_9STRA (MHD domain-containing protein n=23 Tax=Oomycota TaxID=4762 RepID=A0A024TRG0_9STRA)

HSP 1 Score: 468 bits (1203), Expect = 3.760e-163
Identity = 232/271 (85.61%), Postives = 245/271 (90.41%), Query Frame = 1 
Query:    1 AVSWRSEVIKHRKNEIFLDVVEKLNLLVGGNGTVLHSEIMGAVKMKSFLSGMPELKLGLNDKVMFEGTGRGSS-KGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPTDVDSPSFKSSIGTVSYMPGEDAIVWSIKQFNGGREYLMRAHFGLP-----------KWKKPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQHGDYQ 777
            AVSWRSE IKHRKNEIFLDVVEKLNLLV  NGTVLHSEI+GAVKMKSFLSGMPELKLGLNDK++FE TGR SS KGKAVE+EDIKFHQCVRLARFE DRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHS SRIEYM+K KSQFKSRSIANNVEI+IPVP DVDSPSFK SIG+V+Y+P  DAIVW+IKQFNG REYLMRAHFGLP           +WK PI+VKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQ+GDYQ
Sbjct:  156 AVSWRSEGIKHRKNEIFLDVVEKLNLLVASNGTVLHSEILGAVKMKSFLSGMPELKLGLNDKMLFEATGRSSSSKGKAVEMEDIKFHQCVRLARFETDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSRSRIEYMVKTKSQFKSRSIANNVEIVIPVPPDVDSPSFKCSIGSVTYVPDRDAIVWTIKQFNGSREYLMRAHFGLPSISNTNTAATDEWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQ 426
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BLAST of mRNA_C-australica_Contig_993.1.1 vs. uniprot
Match: F0YMC8_AURAN (MHD domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMC8_AURAN)

HSP 1 Score: 466 bits (1200), Expect = 3.790e-163
Identity = 227/267 (85.02%), Postives = 243/267 (91.01%), Query Frame = 1 
Query:    1 AVSWRSEVIKHRKNEIFLDVVEKLNLLVGGNGTVLHSEIMGAVKMKSFLSGMPELKLGLNDKVMFEGTGRGSSKGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPTDVDSPSFKSSIGTVSYMPGEDAIVWSIKQFNGGREYLMRAHFGLPK--------WKKPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQHGDYQ 777
            AVSWRSE IKHRKNEIFLDV+EKLNLLV  NGTVL SEI+GA+KMKSFLSGMPELKLGLNDK+MFE TGR  ++GKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTT VKPLIWVEAVVEPHSHSRIEYM+KAKSQFKSRS+AN V+I+IPVP DVDSPSFKSSIG+V+Y+P  +AIVWSIKQFNG REYLMRAHFGLP         WK PI +KFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQ+GDYQ
Sbjct:  130 AVSWRSEGIKHRKNEIFLDVIEKLNLLVSSNGTVLSSEIVGAIKMKSFLSGMPELKLGLNDKLMFEATGRSMTRGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTQVKPLIWVEAVVEPHSHSRIEYMVKAKSQFKSRSVANGVDIVIPVPHDVDSPSFKSSIGSVTYLPDRNAIVWSIKQFNGSREYLMRAHFGLPSVSSEDPEHWKAPIEIKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQ 396
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BLAST of mRNA_C-australica_Contig_993.1.1 vs. uniprot
Match: A0A835Z8U5_9STRA (Clathrin assembly complex, medium subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8U5_9STRA)

HSP 1 Score: 465 bits (1197), Expect = 2.500e-162
Identity = 226/267 (84.64%), Postives = 244/267 (91.39%), Query Frame = 1 
Query:    1 AVSWRSEVIKHRKNEIFLDVVEKLNLLVGGNGTVLHSEIMGAVKMKSFLSGMPELKLGLNDKVMFEGTGRGSSKGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPTDVDSPSFKSSIGTVSYMPGEDAIVWSIKQFNGGREYLMRAHFGLP--------KWKKPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQHGDYQ 777
            AVSWRSE IKHRKNEIFLDVVEKLNLLV  NGTVLHSEI+GAVKMKSFLSGMPELKLGLNDK++FE TGR S KGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRL THVKPLIWVE VVEPHSHSRIEYM+KAKSQFKSRS+ANNVEI+IPVP DVDSP+FK+S+G+V+Y P  +A VWSIKQF+G REYLMRAHFGLP        +W+ PI+V+FEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQ+GDYQ
Sbjct:  154 AVSWRSEGIKHRKNEIFLDVVEKLNLLVSSNGTVLHSEILGAVKMKSFLSGMPELKLGLNDKLLFESTGRTSGKGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLATHVKPLIWVETVVEPHSHSRIEYMVKAKSQFKSRSVANNVEIVIPVPGDVDSPAFKASVGSVAYHPERNAAVWSIKQFHGSREYLMRAHFGLPSIAADDQAEWRAPIQVRFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQ 420
[Close]
BLAST of mRNA_C-australica_Contig_993.1.1 vs. uniprot
Match: A0A6S8WNP8_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8WNP8_9STRA)

HSP 1 Score: 464 bits (1193), Expect = 7.160e-162
Identity = 224/267 (83.90%), Postives = 245/267 (91.76%), Query Frame = 1 
Query:    1 AVSWRSEVIKHRKNEIFLDVVEKLNLLVGGNGTVLHSEIMGAVKMKSFLSGMPELKLGLNDKVMFEGTGRGSSKGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPTDVDSPSFKSSIGTVSYMPGEDAIVWSIKQFNGGREYLMRAHFGLP--------KWKKPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQHGDYQ 777
            AVSWRSE IKHRKNEIFLDV+EKLNLLV GNG VL+SEI+GA++MKS+LSGMPELKLGLNDK+MFE TGR  ++GKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTT VKPLIWVEAVVEPHSHSRIEYM+KAKSQFKSRS+AN+V+I+IPVP DVDSPSFKSSIG+VSY+P  + I+WSIKQFNG REYLMRAHFGLP        +WK PI V+FEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQ+GDYQ
Sbjct:  144 AVSWRSEGIKHRKNEIFLDVIEKLNLLVSGNGGVLNSEIIGAIRMKSYLSGMPELKLGLNDKLMFEATGRSIARGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTQVKPLIWVEAVVEPHSHSRIEYMVKAKSQFKSRSVANSVDIVIPVPHDVDSPSFKSSIGSVSYLPDRNVIIWSIKQFNGAREYLMRAHFGLPSVSGENPDRWKAPIEVRFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQ 410
[Close]
BLAST of mRNA_C-australica_Contig_993.1.1 vs. uniprot
Match: A0A7S4A236_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A236_9STRA)

HSP 1 Score: 464 bits (1193), Expect = 1.010e-161
Identity = 224/267 (83.90%), Postives = 245/267 (91.76%), Query Frame = 1 
Query:    1 AVSWRSEVIKHRKNEIFLDVVEKLNLLVGGNGTVLHSEIMGAVKMKSFLSGMPELKLGLNDKVMFEGTGRGSSKGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPTDVDSPSFKSSIGTVSYMPGEDAIVWSIKQFNGGREYLMRAHFGLP--------KWKKPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQHGDYQ 777
            AVSWRSE IKHRKNEIFLDV+EKLNLLV GNG VL+SEI+GA++MKS+LSGMPELKLGLNDK+MFE TGR  ++GKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTT VKPLIWVEAVVEPHSHSRIEYM+KAKSQFKSRS+AN+V+I+IPVP DVDSPSFKSSIG+VSY+P  + I+WSIKQFNG REYLMRAHFGLP        +WK PI V+FEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQ+GDYQ
Sbjct:  154 AVSWRSEGIKHRKNEIFLDVIEKLNLLVSGNGGVLNSEIIGAIRMKSYLSGMPELKLGLNDKLMFEATGRSIARGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTQVKPLIWVEAVVEPHSHSRIEYMVKAKSQFKSRSVANSVDIVIPVPHDVDSPSFKSSIGSVSYLPDRNVIIWSIKQFNGAREYLMRAHFGLPSVSGENPDRWKAPIEVRFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQ 420
[Close]
BLAST of mRNA_C-australica_Contig_993.1.1 vs. uniprot
Match: K3X9E5_GLOUD (Uncharacterized protein n=26 Tax=Oomycota TaxID=4762 RepID=K3X9E5_GLOUD)

HSP 1 Score: 461 bits (1186), Expect = 1.170e-160
Identity = 225/267 (84.27%), Postives = 240/267 (89.89%), Query Frame = 1 
Query:    1 AVSWRSEVIKHRKNEIFLDVVEKLNLLVGGNGTVLHSEIMGAVKMKSFLSGMPELKLGLNDKVMFEGTGRGSSKGKAVELEDIKFHQCVRLARFENDRTISFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKSRSIANNVEIIIPVPTDVDSPSFKSSIGTVSYMPGEDAIVWSIKQFNGGREYLMRAHFGLPK--------WKKPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQHGDYQ 777
            AVSWRSE IKH+KNEIFLDVVEKLNLLV  NGTVLHSEI+GAVKM+S LSGMPELKLGLNDK +FE TGR  SKGKAVE+EDIKFHQCVRLARFE DRTISFIPPDGEFDLMTYRL+THVKPLIWVEAVVEPHS SRIEYM+KAKSQFK RS ANNVEI+IPVP DVDSPSFK+S+G V+Y+P  DAIVW+IKQFNG REYLMRAHFGLP         WK PI+VKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQ+GDYQ
Sbjct:  154 AVSWRSEGIKHKKNEIFLDVVEKLNLLVSSNGTVLHSEIIGAVKMRSNLSGMPELKLGLNDKALFEATGRSQSKGKAVEMEDIKFHQCVRLARFETDRTISFIPPDGEFDLMTYRLSTHVKPLIWVEAVVEPHSRSRIEYMVKAKSQFKPRSTANNVEIVIPVPPDVDSPSFKASVGVVTYVPDRDAIVWTIKQFNGSREYLMRAHFGLPSVNNEEVEDWKAPIQVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITQNGDYQ 420
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_993.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0YHG2_AURAN3.220e-16586.52MHD domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A6H5JE16_9PHAE1.400e-16486.52MHD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2R9Z0_9STRA1.500e-16486.89Hypothetical protein n=3 Tax=Dictyochophyceae TaxI... [more]
A0A7R9UAB2_9STRA2.670e-16385.39Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A024TRG0_9STRA3.760e-16385.61MHD domain-containing protein n=23 Tax=Oomycota Ta... [more]
F0YMC8_AURAN3.790e-16385.02MHD domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A835Z8U5_9STRA2.500e-16284.64Clathrin assembly complex, medium subunit n=1 Tax=... [more]
A0A6S8WNP8_9STRA7.160e-16283.90Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
A0A7S4A236_9STRA1.010e-16183.90Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
K3X9E5_GLOUD1.170e-16084.27Uncharacterized protein n=26 Tax=Oomycota TaxID=47... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_993contigC-australica_Contig_993:2..2683 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog42099.EPrPV00000014635
PFAMsAdap_comp_sub,Clat_adaptor_s
Model size780
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons10
Evalue2.81e-166
EggNOG OGsKOG0937@1|root,KOG0937@2759|Eukaryota,1MF6U@121069|Pythiales
DescriptionClathrin assembly complex, medium subunit. Source PGD
Cds size780
COG categoryU
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_993.1.1prot_C-australica_Contig_993.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_993 2..2683 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588861.3064086-CDS-C-australica_Contig_993:1..551682588861.3064086-CDS-C-australica_Contig_993:1..55Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 2..55 +
1682588861.3206182-CDS-C-australica_Contig_993:434..5021682588861.3206182-CDS-C-australica_Contig_993:434..502Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 435..502 +
1682588861.3310893-CDS-C-australica_Contig_993:723..7871682588861.3310893-CDS-C-australica_Contig_993:723..787Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 724..787 +
1682588861.3447711-CDS-C-australica_Contig_993:952..10091682588861.3447711-CDS-C-australica_Contig_993:952..1009Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 953..1009 +
1682588861.3558104-CDS-C-australica_Contig_993:1330..14611682588861.3558104-CDS-C-australica_Contig_993:1330..1461Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 1331..1461 +
1682588861.3649411-CDS-C-australica_Contig_993:1639..17201682588861.3649411-CDS-C-australica_Contig_993:1639..1720Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 1640..1720 +
1682588861.3733106-CDS-C-australica_Contig_993:1934..20081682588861.3733106-CDS-C-australica_Contig_993:1934..2008Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 1935..2008 +
1682588861.3816478-CDS-C-australica_Contig_993:2180..22821682588861.3816478-CDS-C-australica_Contig_993:2180..2282Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 2181..2282 +
1682588861.3926709-CDS-C-australica_Contig_993:2452..25141682588861.3926709-CDS-C-australica_Contig_993:2452..2514Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 2453..2514 +
1682588861.4024076-CDS-C-australica_Contig_993:2596..26831682588861.4024076-CDS-C-australica_Contig_993:2596..2683Chrysoparadoxa australica CS_1217CDSC-australica_Contig_993 2597..2683 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_993.1.1

>prot_C-australica_Contig_993.1.1 ID=prot_C-australica_Contig_993.1.1|Name=mRNA_C-australica_Contig_993.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=260bp
AVSWRSEVIKHRKNEIFLDVVEKLNLLVGGNGTVLHSEIMGAVKMKSFLS
GMPELKLGLNDKVMFEGTGRGSSKGKAVELEDIKFHQCVRLARFENDRTI
SFIPPDGEFDLMTYRLTTHVKPLIWVEAVVEPHSHSRIEYMIKAKSQFKS
RSIANNVEIIIPVPTDVDSPSFKSSIGTVSYMPGEDAIVWSIKQFNGGRE
YLMRAHFGLPKWKKPIRVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVR
YITQHGDYQ*
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mRNA from alignment at C-australica_Contig_993:2..2683+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_993.1.1 ID=mRNA_C-australica_Contig_993.1.1|Name=mRNA_C-australica_Contig_993.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2682bp|location=Sequence derived from alignment at C-australica_Contig_993:2..2683+ (Chrysoparadoxa australica CS_1217)
GCGGTCAGCTGGAGAAGTGAAGTGATAAAGCACCGAAAGAATGAGATCTT
CCTGGTCAGCCACAGCTATTCCAACCTTCTCTCTCTCTCTCTCTCTCTCT
CCCCCCCCCTCTCTCCCTCTCTCCCCCTGCTGCATCTGACTCACTTACAT
TCATTCTTTAAGCTAACTTTCGCACTTCACACACACCCACTCTGCTTGCC
CCTACTCCAGACCACAGCGTTGCCCTCACCTTGGCAACAAGAGCCATGCA
TATTTTTTATTCTTTCATGAAAAATATGACGCAAGCTCAACATACCACCA
CTATTTGCCTAGCCCCAGTTATCTCAATATGTCCACCATGCAAACCACTC
ACCTCACCACCGTGTGCTTCCATTCATCCACCATTCACCATTTACTTTGC
ACCTGTTCAATCGACGCCTTCCTTTTCACTCAGGACGTGGTGGAAAAGCT
CAATCTCCTCGTGGGAGGGAACGGCACGGTGCTGCACAGCGAGATCATGG
GGTAAGTACGATAAAAACAAAGATAAAGATGCAGGCAAATGATGCACTTG
GAGAGAAAGGATGCACCCAGGCACACTATTCTCACCCAGTTGGTCCGATT
TGTACAGTGAGCACATCCTCTTTCTTCCCCTCCCTCTCTCTGCCGTAATC
ATTTCGCTCACCGCCCCAAACTGATGCGGCTGACAACAAACAACGTTTTG
AACGCTTTTCTCTGCGCTGTAGGGCCGTCAAGATGAAGTCGTTTCTGAGC
GGAATGCCGGAGCTAAAACTGGGCCTTAACGATAAGGTAGGTCTCAAGCT
CACCAGAGCCCAACTCACGATAGCTTGACTCACCACTGCTTTGCTCAGCA
ATGCTAACTTACCAGAGCTTAACTCACTACTGCTTGACTCAACGCTGCAA
GCTTGCTCCGGCTCGTGTAACCATCTATCTCATCTGGTTGGCTGCCATCA
GGTCATGTTTGAGGGCACAGGGAGAGGGAGCAGCAAAGGGAAAGCTGTGG
AGCTAGAGGTGACGAGGGGAGCACCCCACTCGCTGAATGACTTGTTTATC
CAACCTCACTAGTTCATTCACATACTCTACTCATCAAGCACCAACTCAAC
TTTCCTTCTCTCATCTCTCTCATTTTTTTCTACTTCTCTCGATCTTACCT
CCCTTCATGCGGCTGTTCTTTCCCCATTTTTTCCCTATCTGTTTCTTCTA
CTTCCTCAGGACATCTCATCCCTCTCTCTGCCTGCTTCTCTTGCTCTCAC
CTCCCGCCATGGGGCTCTTGTTTTCCCATTTTTTTCTCATCCATTTCTTC
AACTGTTTCTTCAACTTTAACTCCCTCAGGACATCAAGTTCCATCAATGC
GTGAGGCTGGCGCGCTTTGAGAATGACCGCACCATCAGCTTCATCCCACC
TGATGGTGAATTTGACCTTATGACTTACCGGCTCACCACGCATGTTAAGC
CACTCATATGGTAAGTTGAAACAGTGAATTACTCTCATGACTTATCGGCT
ATCTCACCACGCCTGTTCAGCCACTCATATGGTGCGTTGCACCAGTGAAT
GACTGGGTGGCTCAGAGATTTGTGGCTGGCTAACCTTCACCCTCTTGCTT
TCTCAACTCACAATTTATCACATTGATCTCAATGACAGGGTGGAGGCTGT
GGTGGAACCGCACAGCCACAGCCGCATTGAGTACATGATCAAAGCCAAGA
GCCAGTTCAAGAGCCGGAGGTCAGCCCTTTTCTCACCCCACAAGTTAGCT
CTTTTAGCATCTCTTTAGTCACCCCAAAAGTTAGCTCTTTTAGCAGCTCT
TTACTCACCCCATCAGCATCAGTTAGCTAAGCAGCAGCATTCAATCAAGC
AGTCAGGCAGGGCAAACTAGGCCCCTCGTCCAGATCAGTCAGTGCCTCAG
TAACCAAGGCTGACTGCTCCCTCCGATCACCAGTATTGCCAACAACGTGG
AGATCATCATCCCGGTGCCCACTGATGTCGATAGCCCCAGCTTTAAGAGC
AGCATAGGTGGGGGACCACCTCCAGCTCCACAGCCTGCTGCTGCAGTCTT
ATGCCCTCACACATCAGCTCTACATGACTGCTGAGTGTGGTCTCTTCCCC
GCACTTGCTCTCACGCATCCAAAGCACTTGACGACCGAGAGTCGACCGAG
TGTTGACTGAGAACCACTGCACCCCCTAGGCACTGTCTCCTATATGCCTG
GTGAGGACGCCATTGTCTGGTCCATCAAGCAGTTCAACGGCGGCAGGGAG
TACCTCATGCGGGCGCACTTTGGGCTGCCCAGTATTAGCGCAGAGGAGGC
ACGAAGCAATTGCTAATCTGATCTAACCTGACCTGACCCTACCTGAGCTG
AACAATACCTTGGCACGAAGCAATCCTAACCTAACCTGACCTGACCTGAC
CTAATCTGACCCTACCTAAGCTGAACGATACCTTGCCACTCCAGACGCAA
GAATGGAAGAAGCCAATCCGGGTAAAATTTGAAATACCGTACTTTACAGT
CAGCGGCATTCAGGTGGGATGGATAAGATAATGCAATTGAATGATTGGCA
CGCATTTTCCTTGACCCAACCCTAATGCCATATATGCTCTGCTAGGTGAG
GTATTTGAAGATTATTGAAAAGAGCGGGTACCAAGCGCTGCCATGGGTCC
GGTACATCACTCAACATGGCGACTACCAGTGA
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Coding sequence (CDS) from alignment at C-australica_Contig_993:2..2683+

>mRNA_C-australica_Contig_993.1.1 ID=mRNA_C-australica_Contig_993.1.1|Name=mRNA_C-australica_Contig_993.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=780bp|location=Sequence derived from alignment at C-australica_Contig_993:2..2683+ (Chrysoparadoxa australica CS_1217)
GCGGTCAGCTGGAGAAGTGAAGTGATAAAGCACCGAAAGAATGAGATCTT
CCTGGACGTGGTGGAAAAGCTCAATCTCCTCGTGGGAGGGAACGGCACGG
TGCTGCACAGCGAGATCATGGGGGCCGTCAAGATGAAGTCGTTTCTGAGC
GGAATGCCGGAGCTAAAACTGGGCCTTAACGATAAGGTCATGTTTGAGGG
CACAGGGAGAGGGAGCAGCAAAGGGAAAGCTGTGGAGCTAGAGGACATCA
AGTTCCATCAATGCGTGAGGCTGGCGCGCTTTGAGAATGACCGCACCATC
AGCTTCATCCCACCTGATGGTGAATTTGACCTTATGACTTACCGGCTCAC
CACGCATGTTAAGCCACTCATATGGGTGGAGGCTGTGGTGGAACCGCACA
GCCACAGCCGCATTGAGTACATGATCAAAGCCAAGAGCCAGTTCAAGAGC
CGGAGTATTGCCAACAACGTGGAGATCATCATCCCGGTGCCCACTGATGT
CGATAGCCCCAGCTTTAAGAGCAGCATAGGCACTGTCTCCTATATGCCTG
GTGAGGACGCCATTGTCTGGTCCATCAAGCAGTTCAACGGCGGCAGGGAG
TACCTCATGCGGGCGCACTTTGGGCTGCCCAAATGGAAGAAGCCAATCCG
GGTAAAATTTGAAATACCGTACTTTACAGTCAGCGGCATTCAGGTGAGGT
ATTTGAAGATTATTGAAAAGAGCGGGTACCAAGCGCTGCCATGGGTCCGG
TACATCACTCAACATGGCGACTACCAGTGA
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