Homology
BLAST of mRNA_C-australica_Contig_992.7.1 vs. uniprot
Match:
A0A2D4BS22_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BS22_PYTIN)
HSP 1 Score: 67.8 bits (164), Expect = 4.500e-8
Identity = 61/203 (30.05%), Postives = 107/203 (52.71%), Query Frame = 1
Query: 1066 DGEVMQQNNNALLAVVRDEVALRERAQQQMRELEQDLLEALAACELSRDGARLEAAELKAKLRLLEAERADAHVFDVYEGDIQRLVSEVEALRGRNLAAEMRLLAMSLPPNSSSPAALSHLETSSVVFRPHHPEASLSAVKEVRRRLRESEMELTRVKQENEAFRRQQRRFMAQERLLEEHSSQSALLGRRLLDADQELRVTR 1674
D ++++N +ALL +V+++ LRE A+ + + +D E A EL + +LEAA L+ KLR LE + A VF+ YE D++ L EV+ LR N+ E+RL A +SS + S H ++ E++RR + E ++Q+ +R+++R+F+AQ +L+ + + + L R L ++ L R
Sbjct: 1050 DAALLRRNYDALLTIVQEQQRLREAAESRAADAVRDHEELRAQHELQIENLKLEAANLRRKLRALERQSPAATVFEHYEQDVESLHREVQQLRALNVQLELRL-AGGASESSSDAVVFGGVSGGSGSGSGVHX-----SLAELKRRYQAMAEERQALEQQLVEYRKRERQFLAQSKLVRDSTRKVDRLARELSAKEETLLAAR 1246
BLAST of mRNA_C-australica_Contig_992.7.1 vs. uniprot
Match:
A0A8K1C5R2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5R2_PYTOL)
HSP 1 Score: 66.6 bits (161), Expect = 9.400e-8
Identity = 61/211 (28.91%), Postives = 104/211 (49.29%), Query Frame = 1
Query: 1066 DGEVMQQNNNALLAVVRDEVALRERAQQQMRELEQDLLEALAACELSRDGARLEAAELKAKLRLLEAERADAHVFDVYEGDIQRLVSEVEALRGRNLAAEMRLLAMS--------LPPNSSSPAALSHLETSSVVFRPHHPEASLSAVKEVRRRLRESEMELTRVKQENEAFRRQQRRFMAQERLLEEHSSQSALLGRRLLDADQELRVTR 1674
D ++++N +ALL VVR++ RE A+ + + + E A EL + +L++ LK+K+R LE + A VFD YE +I RL E + LR +N+ E+RL ++ + P P +L+ L+ A+ E R +L +E +R+++R+F AQ RL+ E + ++ L R L + + L TR
Sbjct: 666 DAALLRKNYDALLTVVREQQQHRESAETRAADAIHECEELRAQYELQIENLKLDSVALKSKVRTLEKQSGCAQVFDQYEHEISRLHVEAQQLRTQNVQLELRLASVDGNNNNAAFMTPGLGGPGSLTELKK------------RYQAMAEDREQLERQLLE----------YRKKERQFYAQSRLVNESTRKADRLARELSEKEDALASTR 854
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_992.7.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 4.50e-8 / Id = 30.05 Expect = 9.40e-8 / Id = 28.91 Sequence A0A2D4BS22_PYTIN A0A8K1C5R2_PYTOL back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 0 Seed ortholog 115417.EPrPW00000016495 Model size 1676 Max annot lvl 121069|Pythiales Hectar predicted targeting category other localisation Exons 7 Evalue 3.71e-08 EggNOG OGs 2CYVQ@1|root,2S6RR@2759|Eukaryota,1MD6I@121069|Pythiales Description Source PGD Cds size 1674 COG category S
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682588860.0428162-CDS-C-australica_Contig_992:11412..11445 1682588860.0428162-CDS-C-australica_Contig_992:11412..11445 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_992 11413..11445 + 1682588860.056371-CDS-C-australica_Contig_992:11626..11812 1682588860.056371-CDS-C-australica_Contig_992:11626..11812 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_992 11627..11812 + 1682588860.0655854-CDS-C-australica_Contig_992:12123..12876 1682588860.0655854-CDS-C-australica_Contig_992:12123..12876 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_992 12124..12876 + 1682588860.0734048-CDS-C-australica_Contig_992:13218..13428 1682588860.0734048-CDS-C-australica_Contig_992:13218..13428 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_992 13219..13428 + 1682588860.0832596-CDS-C-australica_Contig_992:13767..13910 1682588860.0832596-CDS-C-australica_Contig_992:13767..13910 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_992 13768..13910 + 1682588860.0922174-CDS-C-australica_Contig_992:14169..14257 1682588860.0922174-CDS-C-australica_Contig_992:14169..14257 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_992 14170..14257 + 1682588860.1037505-CDS-C-australica_Contig_992:14504..14765 1682588860.1037505-CDS-C-australica_Contig_992:14504..14765 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_992 14505..14765 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_992.7.1
>prot_C-australica_Contig_992.7.1 ID=prot_C-australica_Contig_992.7.1|Name=mRNA_C-australica_Contig_992.7.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=558bp
VLHSSVGGRLTTLHVVRLNVSPGSTYSPRLLEGFIRADALLQDPAEERLR back to top mRNA from alignment at C-australica_Contig_992:11413..14766+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_992.7.1 ID=mRNA_C-australica_Contig_992.7.1|Name=mRNA_C-australica_Contig_992.7.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3354bp|location=Sequence derived from alignment at C-australica_Contig_992:11413..14766+ (Chrysoparadoxa australica CS_1217)GTGCTGCATAGCTCTGTCGGAGGCAGGCTGACG GTACGATCACTCACACA
AGGGCTGCTGATGACTTACATAAGGGCTGCTAATGACCAACATACGGGCT
GCTGATCAGTCACATAAGGGGCTGCACCTGCACGTCAACTCGTATCACAT
GGCTCCTCCCATTGAGTATGGATGGGAGCTCACCCCCAAACCCCTTTGCG
CCCGTTGCCCTCAGACTCTGCACGTGGTTCGATTAAACGTCTCGCCAGGC
AGCACCTACAGTCCCAGGCTGTTGGAGGGGTTTATCAGGGCTGATGCACT
CCTCCAAGATCCAGCAGAGGAGAGGCTCAGGGACATCCTCATGCCACTGC
TTGATGGGAACAACCGCACCTGGGTGGTGGGGGAAGTTGGCACTGCAGAG
GTGAGGCGGTTATCTTTTGTCTTTCCCTAAGCTGATCGAGTGATAGGAGC
CCCCACCGCGGCATTTTGCTTTCGCTGACTCCGGGTCCATAAAATATCAC
AAATTGGATTGAGATTGAGCTATGTTAACTATGCTTACCCTAAGCTGACG
GAATGATAAGAGCCTCCACCTAGGCAGTTTGCTTTCGCTGACTCCGGGTC
CATAAATAGCACACATTGGATTGAGATTGAGTTTGAGACTGAGCTATGTT
AACCCTTAGAAAAGACTTAGCCCTAATGCCAGATCCCATTCTTTTCCTTT
TGCCCACTCAGGATTCATTTCCGGAAGATCTTGGAACCCTCAGATGCCTA
CAGAGTATGCACGGCAGAGAGTCGAGATGCCACCCCACCACTGGGGTTAG
CTTGGAGCAGCTGGAAATGCTGCAGCCAGGCGCAGTGGCAGGGCTAGAAG
GGGTCAGCCAGGCGAAGCAGCAGCAAGTGGATGAGAAGTCGCCTGGTGAC
AAGGGTGAAGTCAAGACTGAGGCTGAGGCTGACTTTGATGTGTTTAATGC
GTTGGCATCGGTGGTGGGACGTGCGAGAGCGACCAGTGCTGAGGCTCAGC
TGGAGAACCTCAGGTTGGCTGTTTCTGAGCGGCAGCAGGAGGTTGTGCCG
GAGAAGGATGCTCTCACTCACACCGAGGAGGTGTGCGCTACTGCAACTTC
CACCTCAACTGCAACTGCAACTGCAAGTGCTGGCGGTGGCAGCGAGAAGA
AGATAATCCGTGACATCAAGAGCGAGATCGAGGCGGTCATGTCCTCGTTC
TTGGCAGACAGGGATGAGCCAGATGAGTCAGAGCAACAGGAGGCTCTGGC
TCATCCGGCCAAGCAGCCAGGGCAGGTGACCATTGAGCCAACTGCCGGAG
CTGCACTAGATAGCCCACCTGAGCAGAAGCAGCAGCAGCCGAGCCTTCCG
CCAGCTCCCGCGTTGTCATCGGAAGTGACGGCTGATGTACCTTCGCCAAT
GTCACCGATGCCTATGCCGTCCATGTCAACGCCTGTGCCAGTACCTATGC
CCATGCTGCACAAG GTGGGAGCTGAACAGTTAGATGCTTCCACACATACC
AAACTAACCTTTGGACCTCCTCTTACCTCCTTGCAACTTGATTATCACAG
CTTCTTTCCTTCCATAAGTCAACTTTGCCCTTGCCAACTTGATTGACCCT
TTAATGCACTCTTCTTTTTATCTTCTTGCAACTTGACTACCACAGCTTCT
TTCCTCCATAAGACAACTCTGCCATTGCCAACTTGATTGACCCTTTCGTG
GACTTCTCTTTTATCTCCTTGCAACTTGACTATCACAGCTTCTTTCCTCT
ATAACACATCTCTGCCATTGCCAACCTGATTGACCCTTCCCCCCCGCCTT
GCTTAGGTGTCGGCAAAAACCCTCGGCCCATCACCCTCCAGCCTGGGCCT
CGTGGCGGGCTGCTCCCCCACCTCGGCCCACACGGCCACCACCCTCACCG
ACGGAGAAGTAATGCAGCAGAACAACAATGCGCTGCTGGCGGTGGTCAGG
GACGAGGTGGCGCTGAGGGAGAGAGCGCAGCAACAGATGAGGGAGCTGGA
GCAGGACCTGCTGGAG GTCAGTCACTCAGTCGGCAGCTTTTGTCCCCAGT
AGTAGAAGCATCAGTGATCGGTCGTGCTGCTCATGCTGCTGTGCCAGTCA
GTCGGTTGGCGGCTTTCGTCCCCGGTAGTAGCATCAGTGATCAGTCGTGC
TGCTCATGCTGCCGTGCCTCCCAGTCGTGTCAAGTCCTCTCATCATTATC
CGCTAGGCGTGTTTAGCAGCTTGCGAGCTTTGAGCTTCATCTCATGTGTC
ATCATCAACTAGGTGTTTTTAGCAGCTTGTGAGATGAGTGAGAGCTTGAC
CACGATGAGTGAGAGCTTACTCACGGACCTCTCACCTCTCATCCCCCTCC
CCTAGGCTTTAGCAGCCTGTGAACTGAGCCGTGATGGAGCTAGGCTGGAG
GCTGCCGAGCTCAAAGCTAAGCTGCGGCTGCTAGAGGCGGAGAGAGCTGA
TGCTCATGTGTTTGACGTCTACGAAGGGGACATCCAGAGGCTTGTCAG GT
GAATCAGATCAATGATGTTTTTATTATTAGACTTAGTTAGACTGCTTCAA
TTCTCCCTTTATGATGAGACTTAATTAGACTGCTTCACTTCTCCCATTAT
TATTAGACTTAATTAGACTGCTTCTCTGGTCCCAAAGGCTCCCTCTCATC
TCCTAAGCAAGCTGCTGCATGCTCTGCAAGCAACCCTGACACGACCTTTT
CCGCCCTGCTGCTCTCTCTTTTCTTCCTTTTTGTTTTATTTGCTTGCTTG
CTCCCAGTGAGGTCGAGGCACTCCGAGGCCGCAACCTTGCAGCGGAGATG
AGGCTGCTTGCAATGTCTTTACCCCCCAACAGCTCTTCCCCAGCG GTGAG
TCTGCTATTAGCTACTGCAGAATGAATGAACGCCCTAGCCTAGCACTGCC
CAGACCTCAGGCTCACGTACCCGCATCCGTTACCTCGGGAACTCATCTGC
TACTAGCTTTGATTTCTCTTGTATTGTTCCCTTAACTTTCCAATAGAGGA
TATGTAATCTGCAGCCGGCCAGCTCCAGCTCAGCTCTCTAACTGAGCTAG
ACTCACGTACCCACGCCCGTTACCTCTGGAACTCATCCACAGGCTCTTTC
TCATCTGGAGACGAGCAGCGTGGTGTTCCGCCCTCATCACCCGGAGGCAA
GTCTGAGTGCTGTCAAGGAGGTCAGGCGGAGGCTGAGGGAGAGCGAGATG
GAGTTAACTCGGGTGAAGCAGGAGAACGAGGCGTTTCGGCGGCAGCAGAG
GCGGTTCATGGCACAAGAGCGGCTGTTGGAAGAGCACAGCAGCCAGTCGG
CTCTGCTGGGGAGGCGGCTGCTGGACGCGGACCAGGAGCTGAGGGTGACG
CGG back to top Coding sequence (CDS) from alignment at C-australica_Contig_992:11413..14766+
>mRNA_C-australica_Contig_992.7.1 ID=mRNA_C-australica_Contig_992.7.1|Name=mRNA_C-australica_Contig_992.7.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1674bp|location=Sequence derived from alignment at C-australica_Contig_992:11413..14766+ (Chrysoparadoxa australica CS_1217) back to top