Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 709 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 357 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682588860.1353788-UTR-C-australica_Contig_992:3197..3291 | 1682588860.1353788-UTR-C-australica_Contig_992:3197..3291 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_992 3198..3291 - |
| 1682588860.1581988-UTR-C-australica_Contig_992:3648..3752 | 1682588860.1581988-UTR-C-australica_Contig_992:3648..3752 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_992 3649..3752 - |
| 1682588860.1750307-UTR-C-australica_Contig_992:4063..4217 | 1682588860.1750307-UTR-C-australica_Contig_992:4063..4217 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_992 4064..4217 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682588860.147006-CDS-C-australica_Contig_992:3291..3648 | 1682588860.147006-CDS-C-australica_Contig_992:3291..3648 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_992 3292..3648 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_992.2.1 >prot_C-australica_Contig_992.2.1 ID=prot_C-australica_Contig_992.2.1|Name=mRNA_C-australica_Contig_992.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=119bp
MLCLIKKGAAVNEKGPEGVTPLTIACEMGHVLCAKVLLDSGTDINAAGYK
RRTALMYAAEKGHLPVLQYLLEKAADVSAADDFQITALHHACFNGRASWV
PLLLDSRADLNATDCDGD* back to topmRNA from alignment at C-australica_Contig_992:3198..4217- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_992.2.1 ID=mRNA_C-australica_Contig_992.2.1|Name=mRNA_C-australica_Contig_992.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1020bp|location=Sequence derived from alignment at C-australica_Contig_992:3198..4217- (Chrysoparadoxa australica CS_1217)
CTTGCCCTCTTCATTGATACCTATAAGGTCTGCTCCAGGAGCTGCCTGGG
GTACTCTGGCCATTACATTACAAGCCAAGGTTGAGGAGAGGAGAGGAAGA
GGGATCAGCATTATGTCAGCTGCTGAGGTTTAGGTCCTCGTGAGAGAGAG
CAAGGTGAGAGGAAGGGGGTAATCAATCTTAAGTCTCATACCACCGCTAA
CGACGGACGGTGACACGGAGGGATCAGAGGTTCGGGGCTCGGGACTCTCC
CTCATCTGTGCTACATCATCAGTCACCCATCACCAACCACCTATCAACAA
AGCGGGAGGAGAGAGCGTGGGGCCGGGAGATTAAGCAGCTTAATTGAGGG
TAGCTTGCGGGGAGGTGATTGAGCTCCTCGCCTTATTCCTCTCCTCTCCT
CTTAACCTCAATCAATGCTAATAGCAAGGCTTTTTAACCTTCTCCCCTTT
CCTTGGTTGCCTCAGCTGAAGACAGCTAAGTAAATAGAGAATGAGTGAGT
TTATGAGTGAGGAGGAAAGCGCTGAAGGAGTCCTTGCGTCTGGCTGCAGT
GGATGGTGATGTGGAGCTGATGCTGTGTTTGATCAAGAAGGGAGCAGCAG
TGAATGAGAAAGGGCCTGAGGGGGTTACACCGCTCACGATTGCTTGTGAG
ATGGGGCATGTGTTGTGCGCTAAGGTTTTGCTTGATAGTGGTACAGATAT
CAATGCAGCTGGTTACAAGAGAAGAACAGCTCTCATGTATGCCGCAGAGA
AGGGCCACCTTCCAGTGTTGCAGTACCTTTTGGAAAAAGCTGCTGATGTT
AGCGCAGCGGACGATTTTCAGATCACTGCACTTCATCACGCTTGTTTTAA
TGGCCGCGCCAGTTGGGTACCTCTTCTTCTCGACAGCCGTGCAGATCTTA
ATGCTACAGATTGTGATGGAGATTGAGCCCTAATGGTTACTTTAGTACCA
CACAGATGTCGTTATTTTAAAGAGAGGTGCAGATCCAGACAAGTAAATTA
CATATGCACGTCATAGTATT back to topCoding sequence (CDS) from alignment at C-australica_Contig_992:3198..4217- >mRNA_C-australica_Contig_992.2.1 ID=mRNA_C-australica_Contig_992.2.1|Name=mRNA_C-australica_Contig_992.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=357bp|location=Sequence derived from alignment at C-australica_Contig_992:3198..4217- (Chrysoparadoxa australica CS_1217)
ATGCTGTGTTTGATCAAGAAGGGAGCAGCAGTGAATGAGAAAGGGCCTGA
GGGGGTTACACCGCTCACGATTGCTTGTGAGATGGGGCATGTGTTGTGCG
CTAAGGTTTTGCTTGATAGTGGTACAGATATCAATGCAGCTGGTTACAAG
AGAAGAACAGCTCTCATGTATGCCGCAGAGAAGGGCCACCTTCCAGTGTT
GCAGTACCTTTTGGAAAAAGCTGCTGATGTTAGCGCAGCGGACGATTTTC
AGATCACTGCACTTCATCACGCTTGTTTTAATGGCCGCGCCAGTTGGGTA
CCTCTTCTTCTCGACAGCCGTGCAGATCTTAATGCTACAGATTGTGATGG
AGATTGA back to top
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