mRNA_C-australica_Contig_99.3.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_99.3.2 vs. uniprot
Match: A0A6S8AM73_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8AM73_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.090e-27 Identity = 52/86 (60.47%), Postives = 68/86 (79.07%), Query Frame = 1 Query: 55 AFPANYTVPEVWTGPAEPPSGGSKLNSDTAGARRERELPRGEHAVQLYSLGTPNGRKVTILLEELGIEYDAYKINIGEGDQFDSDF 312
+ P+NY VP+VW P G+ +N TAGAR E +LPRG+H +QL+SLGTPNG+KVTI+LEELG+EYDA+K+NIG+G+QF S F
Sbjct: 30 SLPSNYVVPKVWVEPKIEGKWGA-INKPTAGARFEAKLPRGDHPLQLHSLGTPNGQKVTIMLEELGVEYDAWKVNIGKGEQFSSGF 114
BLAST of mRNA_C-australica_Contig_99.3.2 vs. uniprot
Match: A0A7S3PBB9_9STRA (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3PBB9_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.760e-26 Identity = 52/86 (60.47%), Postives = 68/86 (79.07%), Query Frame = 1 Query: 55 AFPANYTVPEVWTGPAEPPSGGSKLNSDTAGARRERELPRGEHAVQLYSLGTPNGRKVTILLEELGIEYDAYKINIGEGDQFDSDF 312
+ P+NY VP+VW P G+ +N TAGAR E +LPRG+H +QL+SLGTPNG+KVTI+LEELG+EYDA+K+NIG+G+QF S F
Sbjct: 30 SLPSNYVVPKVWVEPKIEGKWGA-INKPTAGARFEAKLPRGDHPLQLHSLGTPNGQKVTIMLEELGVEYDAWKVNIGKGEQFSSGF 114
BLAST of mRNA_C-australica_Contig_99.3.2 vs. uniprot
Match: A0A7S0EYN3_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EYN3_9CRYP) HSP 1 Score: 107 bits (266), Expect = 8.390e-25 Identity = 57/88 (64.77%), Postives = 67/88 (76.14%), Query Frame = 1 Query: 55 AFPANYTVPEVWTGPAEPPSGGS--KLNSDTAGARRERELPRGEHAVQLYSLGTPNGRKVTILLEELGIEYDAYKINIGEGDQFDSDF 312
+ P +Y VP VWT P E GG+ K+N AGAR ++ LPRGEH +QLYSLGTPNG KVTILLEELGIEYDA+KINI + DQF S+F
Sbjct: 99 SLPESYVVPAVWTEP-EDGLGGTMGKMNRPIAGARFDKALPRGEHPLQLYSLGTPNGHKVTILLEELGIEYDAWKINIMQLDQFGSEF 185
BLAST of mRNA_C-australica_Contig_99.3.2 vs. uniprot
Match: A0A7W6JXW6_9SPHN (GST-like protein n=4 Tax=Sphingomonas TaxID=13687 RepID=A0A7W6JXW6_9SPHN) HSP 1 Score: 102 bits (253), Expect = 2.090e-23 Identity = 56/92 (60.87%), Postives = 65/92 (70.65%), Query Frame = 1 Query: 61 PANYTVPEVWTGPAEPPSGG--SKLNSDTAGARRERELPRGEHAVQLYSLGTPNGRKVTILLEEL------GIEYDAYKINIGEGDQFDSDF 312
PA Y P+VWT E PSGG + +N +GA ++ LP GEH +QLYSLGTPNG+KVTILLEEL G EYDA+KINIGEGDQF S F
Sbjct: 12 PAGYVPPKVWTW--EQPSGGQFANINRPVSGATHDKVLPVGEHPIQLYSLGTPNGQKVTILLEELLAAGHAGAEYDAWKINIGEGDQFGSGF 101
BLAST of mRNA_C-australica_Contig_99.3.2 vs. uniprot
Match: A0A7X5ZX88_9SPHN (GST-like protein n=4 Tax=Proteobacteria TaxID=1224 RepID=A0A7X5ZX88_9SPHN) HSP 1 Score: 101 bits (251), Expect = 4.110e-23 Identity = 56/93 (60.22%), Postives = 63/93 (67.74%), Query Frame = 1 Query: 58 FPANYTVPEVWTGPAEPPSGG--SKLNSDTAGARRERELPRGEHAVQLYSLGTPNGRKVTILLEEL------GIEYDAYKINIGEGDQFDSDF 312
PA Y P VWT E PSGG + +N +GA E+ LP G H +QLYSLGTPNG+KVTILLEEL G EYDA+KINIGEGDQF S F
Sbjct: 11 LPAGYVPPRVWTW--EQPSGGQFANINRPVSGATHEKALPVGAHPIQLYSLGTPNGQKVTILLEELLAAGHGGAEYDAWKINIGEGDQFGSGF 101
BLAST of mRNA_C-australica_Contig_99.3.2 vs. uniprot
Match: UPI001CC131AF (glutathione-dependent disulfide-bond oxidoreductase n=1 Tax=Kangiella taiwanensis TaxID=1079179 RepID=UPI001CC131AF) HSP 1 Score: 100 bits (249), Expect = 7.020e-23 Identity = 52/88 (59.09%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 67 NYTVPEVWTGPAEPPSGGSKLNSDTAGARRERELPRGEHAVQLYSLGTPNGRKVTILLEEL------GIEYDAYKINIGEGDQFDSDF 312
NYT P+VWT +E + +N TAGAR E+ELP+GEH QLYSL TPNG+KVTI+LEEL EYDA+ I IG+GDQF SDF
Sbjct: 6 NYTPPKVWTWNSENGGEWASINRPTAGARHEQELPKGEHPFQLYSLATPNGQKVTIMLEELLAMGHNNAEYDAHLIKIGDGDQFGSDF 93
BLAST of mRNA_C-australica_Contig_99.3.2 vs. uniprot
Match: A0A0S6X0Z7_9SPHN (Glutathione S-transferase YghU n=5 Tax=Novosphingobium TaxID=165696 RepID=A0A0S6X0Z7_9SPHN) HSP 1 Score: 100 bits (248), Expect = 8.700e-23 Identity = 54/87 (62.07%), Postives = 62/87 (71.26%), Query Frame = 1 Query: 70 YTVPEVWTGPAEPPSGGSKLNSDTAGARRERELPRGEHAVQLYSLGTPNGRKVTILLEEL---GI---EYDAYKINIGEGDQFDSDF 312
YT P+VWT AE + +N TAGAR E+ELPRGEH QLYSLGTPNG+KVTIL EEL G+ EYDA+ +NIGEG QF S F
Sbjct: 6 YTPPKVWTHDAENGGTWASINRPTAGAREEKELPRGEHPFQLYSLGTPNGQKVTILFEELLAAGVSEAEYDAWLVNIGEGTQFTSGF 92
BLAST of mRNA_C-australica_Contig_99.3.2 vs. uniprot
Match: A0A4U1YNY2_9VIBR (Glutathione-dependent disulfide-bond oxidoreductase n=4 Tax=Vibrionales TaxID=135623 RepID=A0A4U1YNY2_9VIBR) HSP 1 Score: 99.4 bits (246), Expect = 1.800e-22 Identity = 56/90 (62.22%), Postives = 67/90 (74.44%), Query Frame = 1 Query: 70 YTVPEVWTGPAEPPSGGSK---LNSDTAGARRERELPRGEHAVQLYSLGTPNGRKVTILLEEL---GI---EYDAYKINIGEGDQFDSDF 312
YT P++W + SGG+K +NS +GAR E++LP G+HA+QLYSLGTPNG+KVTILLEEL GI EYDAY INIGEGDQF S F
Sbjct: 5 YTPPKIWVNDS---SGGNKWANINSPVSGARHEQDLPVGKHALQLYSLGTPNGQKVTILLEELLALGITEAEYDAYLINIGEGDQFSSGF 91
BLAST of mRNA_C-australica_Contig_99.3.2 vs. uniprot
Match: A0A7S2U4I1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2U4I1_9EUKA) HSP 1 Score: 100 bits (250), Expect = 1.940e-22 Identity = 57/103 (55.34%), Postives = 67/103 (65.05%), Query Frame = 1 Query: 49 QEAFPANYTVPEVWTGPAEPPSGGS--KLNSDTAGARRERELPRGEHAVQLYSLGTPNGRKVTILLEEL----GIEYDAYKINIGEGDQFDSDFGTASYASPN 339
QEAFP Y PEVW P GG LN AG + E+ELP+G+H +QL+S+ TPNG K T+LLEEL G+EYDAY INIGEGDQF S F A+PN
Sbjct: 83 QEAFPEGYVPPEVWE---YKPQGGKWGSLNKPIAGPQSEKELPKGQHPLQLHSMATPNGVKATVLLEELHDAYGLEYDAYPINIGEGDQFTSGF---VQANPN 179
BLAST of mRNA_C-australica_Contig_99.3.2 vs. uniprot
Match: UPI001FB8FAAA (glutathione-dependent disulfide-bond oxidoreductase n=1 Tax=Novosphingobium sp. 2638 TaxID=2930389 RepID=UPI001FB8FAAA) HSP 1 Score: 99.0 bits (245), Expect = 2.390e-22 Identity = 51/87 (58.62%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 70 YTVPEVWTGPAEPPSGGSKLNSDTAGARRERELPRGEHAVQLYSLGTPNGRKVTILLEEL------GIEYDAYKINIGEGDQFDSDF 312
YT P+VWT AE +K+N AG E+ LPRGEH +QLYSLGTPNG+KVTI+LEEL G EYDA+ I+IG+GDQF S F
Sbjct: 6 YTPPKVWTWDAESGGDWAKINRPIAGPTHEKNLPRGEHPLQLYSLGTPNGQKVTIMLEELLAAGKTGAEYDAWLISIGDGDQFSSGF 92 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_99.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_99.3.2 >prot_C-australica_Contig_99.3.2 ID=prot_C-australica_Contig_99.3.2|Name=mRNA_C-australica_Contig_99.3.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=127bp MTQEAFPANYTVPEVWTGPAEPPSGGSKLNSDTAGARRERELPRGEHAVQback to top mRNA from alignment at C-australica_Contig_99:14389..15013- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_99.3.2 ID=mRNA_C-australica_Contig_99.3.2|Name=mRNA_C-australica_Contig_99.3.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=625bp|location=Sequence derived from alignment at C-australica_Contig_99:14389..15013- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_99:14389..15013- >mRNA_C-australica_Contig_99.3.2 ID=mRNA_C-australica_Contig_99.3.2|Name=mRNA_C-australica_Contig_99.3.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=381bp|location=Sequence derived from alignment at C-australica_Contig_99:14389..15013- (Chrysoparadoxa australica CS_1217)back to top |