mRNA_C-australica_Contig_99.17.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_99.17.1 vs. uniprot
Match: D8LT02_ECTSI (Dimethylargininase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT02_ECTSI) HSP 1 Score: 268 bits (685), Expect = 4.030e-79 Identity = 139/248 (56.05%), Postives = 170/248 (68.55%), Query Frame = 2 Query: 14 ALAIEQHANYVKALRLFVDELHEVPADEDLPDCVFIEDTAVVARGKVVMTRPGHPSREREVDAVREAFQTSPHLKRTKVVELQDASARVDGGDCLFTGRHLFVGISTRTNEQGARCLQQAFGASLPVITVDMATHGALHLKSLCSLLRPGLLCFHHSDAGLDVMAQMSDQVGSSTYKAVAVPDQLTANAVSIYGDSKWRGLLVQKGRCTESLGIIRDAFSVAERERVIEVDTSELAKQDGALTCCSLL 757 ALA +QHA YV AL VD + +PA E PDC F+ED V ARG V R GH SR EVDAVREA T+P LK K V ++D AR DGGD LFTGRH+FVGIS RTN+ GA L +AFG SLPV+ V +A GALHLKSL SLLRPG+L F +DAG + + M+ VG + YKA+ VPDQ +AN VS+ +WRG L+Q GRC ES +IR F+ E+ +V+E+D SE+ K D ALTCCS+L Sbjct: 43 ALASKQHAGYVDALSKIVDSVEALPALEAHPDCPFVEDAVVYARGIAVTLRQGHDSRIGEVDAVREALATNPALKCVKTVHMEDPDARCDGGDVLFTGRHMFVGISERTNKAGAAALAKAFGPSLPVVPVPVA--GALHLKSLVSLLRPGVLLFARNDAGQEAVGSMASDVGETAYKAIGVPDQPSANVVSVIHKGQWRGALIQGGRCEESRWLIRKCFTEKEQAKVLEIDYSEMIKPDAALTCCSVL 288
BLAST of mRNA_C-australica_Contig_99.17.1 vs. uniprot
Match: A0A835YN07_9STRA (Dimethylargininase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN07_9STRA) HSP 1 Score: 231 bits (589), Expect = 2.220e-65 Identity = 131/264 (49.62%), Postives = 168/264 (63.64%), Query Frame = 2 Query: 11 IALAIEQHANYVKALRLFVDELHEVPADEDLPDCVFIEDTAVVARGKVVMTRPGHPSREREVDAVREAFQTSPH-----LKRTKVVELQDASARVDGGDCLFTGRHLFVGISTRTNEQGARCLQQAFGASLPVITVDMAT-HGALHLKSLCSLLRPGLLCFHHSDAGLDVMAQMSDQVGSSTYKAVAVPDQLTANAVSIYGDSKWRGLLVQKGRCTESLGIIRDAF------SVAERERVIEVDTSELAKQDGALTCCSLLCTV 766 +ALA +Q YV ALR VD +H +PAD+ PDC FIEDT V ARG V+TRPGHPSR EV AV + F+T+ L+ + EL DA A +DGGD L+TGRH+FVG+S RTN ARCLQ+AFG SLPV+ +++ G LHLK L + L PG LC S AG V +M+ V Y +VAVPD+ AN VSI+ D+ WRG LVQ RC +S+ ++R AF S + + V E+D SE K DG+LTC S++ V Sbjct: 35 VALAKQQWQGYVSALRKLVDTVHVIPADDAYPDCPFIEDTVVCARGTAVLTRPGHPSRMGEVQAVGDWFKTAEEYAEGALQLQTLAEL-DAEATLDGGDVLYTGRHMFVGLSKRTNAAAARCLQRAFGPSLPVVPINIQDLDGVLHLKCLVTGLGPGALCVVDSPAGRQVGERMAGAVDGVAYTSVAVPDEFAANVVSIHSDT-WRGALVQGNRCRDSVNLLRSAFASSASSSSSLQGAVHELDMSEFIKADGSLTCLSVILEV 296
BLAST of mRNA_C-australica_Contig_99.17.1 vs. uniprot
Match: A0A836CCP0_9STRA (Dimethylargininase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP0_9STRA) HSP 1 Score: 222 bits (566), Expect = 2.880e-62 Identity = 119/248 (47.98%), Postives = 161/248 (64.92%), Query Frame = 2 Query: 11 IALAIEQHANYVKALRLFVDELHEVPADEDLPDCVFIEDTAVVARGKVVMTRPGHPSREREVDAVREAFQTSPHLKRTKV--VELQDASARVDGGDCLFTGRHLFVGISTRTNEQGARCLQQAFGASLPVITVDMATHGA--LHLKSLCSLLRPGLLCFHHSDAGLDVMAQMSDQVGSSTYKAVAVPDQLTANAVSIYGDSKWRGLLVQKGRCTESLGIIRDAFSVAERERVIEVDTSELAKQDGALT 742 +ALA Q YV LR VDE+ EVPA ED P+C IED V ARG V+T+PG+PSR E AVR + + + +K K+ + D A ++G D LFTG+H+FVG++ RTN+ G CL++AFG SLPVI +D+ GA LKSL + LRPGLLC +D GL+V +M+D VG S+YKA+AVPD+ +AN +S+ KWRG L+Q RC S+G+IR AF + E+ ++E + SE K LT Sbjct: 33 VALARRQWDAYVGTLRHLVDEVVEVPASEDHPECAAIEDLLVFARGSAVLTKPGNPSRRGEAAAVRSSLENNEGIKGIKLHMMSNMDPQATLNGHDVLFTGKHMFVGLNARTNDAGVECLKRAFGKSLPVIPIDLEGIGASAASLKSLVTSLRPGLLCVAANDVGLEVAGRMADAVGRSSYKAIAVPDEPSANVLSL-NSGKWRGALLQADRCENSVGLIRGAFELNEQNSILEHEMSEFVKAGMGLT 279
BLAST of mRNA_C-australica_Contig_99.17.1 vs. uniprot
Match: A0A835YSW0_9STRA (U3-containing 90S pre-ribosomal complex subunit-domain containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW0_9STRA) HSP 1 Score: 186 bits (472), Expect = 1.330e-48 Identity = 98/206 (47.57%), Postives = 131/206 (63.59%), Query Frame = 1 Query: 2176 SDVLWACIAKSMAGVMTPLELTSPWLELEHMCQVPSFGAHTLPKLPGYIKSVMPEWSSFVTR-----KNTGKGLKQAPGT---------AAVKGSPPVIVVCSGARRCMEVIKALATFRCSVLKLFAKHMNVEEQAKMLRKSKFSLAVGTPGRIKRLAETGALSLKATQLLVLDLEKNVKGFSVLDIKGVAEDLCGMLADYVKPEL 2751 +D +W + + +EL +PW+E E M + FGAHT+ KLPGYIK+ +P W + + +G +K G A GSPP+++VCSGARRCMEVIKAL+ FRC VLKLFAKH+ EQAKMLR+ F +AVGTPGR+ +LA GA++L TQLL+LD ++ KG SVLD+ G EDLC +L +V+P L Sbjct: 127 ADAVWERCCAVLGPQLAEIELLTPWVEAEDMAVLEQFGAHTIAKLPGYIKATLPNWRALTAAAPAKDRGSGGAVKWGAGKPRGGGAKPPAPGAGSPPIVIVCSGARRCMEVIKALSPFRCQVLKLFAKHLKPAEQAKMLRRY-FPIAVGTPGRVLKLAAEGAVALGGTQLLLLDAARDAKGRSVLDMAGAREDLCELLRAHVRPHL 331
BLAST of mRNA_C-australica_Contig_99.17.1 vs. uniprot
Match: D7FI26_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI26_ECTSI) HSP 1 Score: 186 bits (472), Expect = 4.630e-48 Identity = 94/195 (48.21%), Postives = 129/195 (66.15%), Query Frame = 1 Query: 2167 EDPSDVLWACIAKSMAGVMTPLELTSPWLELEHMCQVPSFGAHTLPKLPGYIKSVMPEWSSFVTRKNTGKGLKQAPGTAAVKGSPPVIVVCSGARRCMEVIKALATFRCSVLKLFAKHMNVEEQAKMLRKSKFSLAVGTPGRIKRLAETGALSLKATQLLVLDLEKNVKGFSVLDIKGVAEDLCGMLADYVKPEL 2751 E+ ++ LWA K ++TPLEL PW+ + +V FGAHT KL G+IK+ +P+W + +N+ A +GSP V++VC+GARRC+EV+K L FRC V+KLFAKH+ +EEQ MLRK F L VGTPGR++ LA G+L L ++ L++LDLEKNVKG SVLD+ GV+ D L+D V+P L Sbjct: 165 EEEAEELWARFCKVRGDLVTPLELDFPWITAGSLARVEGFGAHTAMKLVGFIKASLPDWKKRIQNRNSN----------APRGSPSVLIVCTGARRCVEVMKHLTAFRCQVVKLFAKHLKIEEQKVMLRKGCFPLGVGTPGRMRALAAAGSLRLDSSALVILDLEKNVKGRSVLDMDGVSGDTMAFLSDCVRPHL 349
BLAST of mRNA_C-australica_Contig_99.17.1 vs. uniprot
Match: A0A8H7Q5X3_MORIS (Dimethylargininase n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7Q5X3_MORIS) HSP 1 Score: 171 bits (434), Expect = 3.090e-44 Identity = 106/259 (40.93%), Postives = 152/259 (58.69%), Query Frame = 2 Query: 2 PPSIALAIEQHANYVKALRLFVDELHEVPADED-----LPDCVFIEDTAVVARGKVVMTRPGHPSREREVDAVREAFQTSPHLKRTKVVELQDASARVDGGDCLFTGRHLFVGISTRTNEQGARCLQQAFGASLPVITVDMATHG-ALHLKSLCSLLRPGLLCFHHSDAGLDVMAQMSDQVGSSTYKAVAVPDQLTANAVSIYGDSKWRGLLVQKGRCTESLGIIRDAFSVAERERVIE-VDTSELAKQDGALTCCSLL 757 P I+LA++QH YV+ L+ V++L EVPADE PDC F+EDT VV + V+ R GH SR++E+ + +A Q +K + QD +A VDGGDC+ G HL+VG+S RTN QGA LQ+AF + V+ +D + LHLK L S L L + AG ++ +M ++ G + Y A+ VPDQ+ AN +++ D +++QK ES I+ + S +R E +D SEL K DGALTCCS+L Sbjct: 27 PIDISLALKQHEAYVEVLKKHVNQLIEVPADEGHPVAVAPDCCFVEDTCVVVKETAVLNRLGHTSRQKEIQGIEQALQKVSSIKTIVHMSSQDETATVDGGDCMLIGDHLYVGLSARTNRQGADVLQKAFIGACKVVILDTLQNSETLHLKCLVSPLNVDTLVVCSAQAGKALLKEMKEKSGIN-YNAIEVPDQVPANILALGPDF----VVIQKN-FPESEKILNEELS--KRGYKFEALDMSELIKADGALTCCSVL 277
BLAST of mRNA_C-australica_Contig_99.17.1 vs. uniprot
Match: A0A1Z5KK28_FISSO (Dimethylargininase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KK28_FISSO) HSP 1 Score: 170 bits (431), Expect = 6.110e-44 Identity = 106/257 (41.25%), Postives = 150/257 (58.37%), Query Frame = 2 Query: 8 SIALAIEQHANYVKALRLFVDELHEVPADEDLPDCVFIEDTAVVARGKVVMTRPGHPSREREVDAVREAFQTSPHLKRTKVVELQDAS--ARVDGGDCLFTGRHLFVGISTRTNEQGARCLQQAFGASLPVITVD--MATHGALHLKSLCSLLRPGLLCFHHSDAGLDVMAQMSDQVGSSTYKAVAVPDQLTANAVSIYGDSKWRGLLVQKGRCTESLGIIRDAFSVAERERVIEVDTSELAKQDGALTCCSLLCTV 766 ++ LA +QH +Y+KALR + L ++PA + PD +F+EDT V +V + +PGHPSR EV++V +A Q L V +L++ + A DGGD ++TGRHLF+G+S RTN GA+ LQQAF A +P I + MA + LHLKS +L P L AG + A + Y V VPD L N V++ G +LVQ CT+S I+ A + + +I V+TSELAK+D ALTCCS+L + Sbjct: 28 NMTLATQQHESYIKALRSIIPVL-QLPALPEYPDSLFVEDTVVAIDRQVALLQPGHPSRRGEVESVHQALQ---QLGMQVVADLRNNTPDAYCDGGDVMYTGRHLFIGLSNRTNRIGAQLLQQAFPA-IPSIVIPPTMAGNQVLHLKSAVTLFAPDTLVVPTGPAGDAIWATFD----AYNYSVVRVPDVLACNVVAVNGS-----VLVQDTSCTDSRRILEQAARERDVQELIWVNTSELAKKDAALTCCSVLLNI 270
BLAST of mRNA_C-australica_Contig_99.17.1 vs. uniprot
Match: A0A7K7RR19_9PASS (Dimethylargininase (Fragment) n=2 Tax=Sauria TaxID=32561 RepID=A0A7K7RR19_9PASS) HSP 1 Score: 163 bits (413), Expect = 7.600e-42 Identity = 99/229 (43.23%), Postives = 130/229 (56.77%), Query Frame = 2 Query: 80 EVPADEDLPDCVFIEDTAVVARGKVVMTRPGHPSREREVDAVREAFQTSPHLKRTKVVELQDASARVDGGDCLFTGRHLFVGISTRTNEQGARCLQQAFGASLPVITVDMATHGALHLKSLCSLLRPGLLCFHHSDAG---LDVMAQMSDQVGSSTYKAVAVPDQLTANAVSIYGDSKWRGLLVQKGRCTESLGIIRDAFSVAERERVIEVDTSELAKQDGALTCCSLL 757 E+PADE LPDCVF+ED AVV ++TRPG PSR +EV+A++ A ++ +VE+ D +A +DGGD LFTGR FVG+S RTN++GA L F V TV + H +LHLKS CS+ P L+ S+A L M QMSD Y + VPD AN + + SK LL R E F + +I + T+ELAK DG+LTCCS+L Sbjct: 23 ELPADESLPDCVFVEDVAVVCEETALLTRPGAPSRRKEVEAMKRALESL----NLNIVEMVDENATLDGGDVLFTGREFFVGLSRRTNQRGAEILADTF-KDYAVSTVPV--HDSLHLKSFCSMAGPNLIAIGSSEAAQKALKTMQQMSDH----RYDKLTVPDDAAANCIYLNVPSKGHVLL---HRAPEEYPESAKVFEKLKDHMLIPIATTELAKVDGSLTCCSVL 237
BLAST of mRNA_C-australica_Contig_99.17.1 vs. uniprot
Match: G1SNI4_RABIT (Dimethylargininase n=24 Tax=Boreoeutheria TaxID=1437010 RepID=G1SNI4_RABIT) HSP 1 Score: 165 bits (417), Expect = 2.710e-41 Identity = 107/252 (42.46%), Postives = 139/252 (55.16%), Query Frame = 2 Query: 14 ALAIEQHANYVKALRLFVD-ELHEVPADEDLPDCVFIEDTAVVARGKVVMTRPGHPSREREVDAVREAFQTSPHLKRTKVVELQDASARVDGGDCLFTGRHLFVGISTRTNEQGARCLQQAFGASLPVITVDMATHGALHLKSLCSLLRPGLLCFHHSDAG---LDVMAQMSDQVGSSTYKAVAVPDQLTANAVSIYGDSKWRGLLVQKGRCTESLGIIRDAFSVAERERVIEVDTSELAKQDGALTCCSLL 757 A A QH YV L + ++ E+PADE LPDCVF+ED AVV ++TRPG PSR +EVD ++EA + + +VE++D +A +DGGD LFTGR FVG+S RTN++GA L F V TV +A ALHLKS CS+ P L+ S+ L +M QMSD Y + VPD + AN + I SK LL R E + + +I V SEL K DG LTCCS+L Sbjct: 92 ARAERQHQLYVGVLGSKLGLQVVELPADESLPDCVFVEDVAVVCEETALITRPGAPSRRKEVDMMKEALEKL----QLNIVEMKDENATLDGGDVLFTGREFFVGLSKRTNQRGAEILADTF-KDYAVSTVPVAD--ALHLKSFCSMAGPNLIAIGSSEPAQKALKIMQQMSDH----RYDKLTVPDDVAANCIYINSPSKGHVLL---HRTPEEYPESAKVYEKLKDHLLIPVSNSELEKVDGLLTCCSVL 329
BLAST of mRNA_C-australica_Contig_99.17.1 vs. uniprot
Match: A0A8K0APJ2_9AVES (N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 (Fragment) n=7 Tax=Neognathae TaxID=8825 RepID=A0A8K0APJ2_9AVES) HSP 1 Score: 162 bits (410), Expect = 3.130e-41 Identity = 103/253 (40.71%), Postives = 139/253 (54.94%), Query Frame = 2 Query: 11 IALAIEQHANYVKALRLFVD-ELHEVPADEDLPDCVFIEDTAVVARGKVVMTRPGHPSREREVDAVREAFQTSPHLKRTKVVELQDASARVDGGDCLFTGRHLFVGISTRTNEQGARCLQQAFGASLPVITVDMATHGALHLKSLCSLLRPGLLCFHHSDAG---LDVMAQMSDQVGSSTYKAVAVPDQLTANAVSIYGDSKWRGLLVQKGRCTESLGIIRDAFSVAERERVIEVDTSELAKQDGALTCCSLL 757 +A A +H YV LR + ++ E+PADE LPDCVF+ED AVV ++TRPG PSR +EV+A++ ++ ++E+ D +A +DGGD LFTGR FVG+S RTN++GA L F V TV + H +LHLKS CS+ P L+ S+A L M QMSD Y + VPD AN + + SK LL R E F + +I + +EL K DGALTCCS+L Sbjct: 15 LARAEREHQLYVGVLRGKLGLQVLELPADESLPDCVFVEDAAVVCEETALLTRPGAPSRRKEVEAMKRVLESL----NLNIIEMVDENATLDGGDVLFTGREFFVGLSRRTNQRGAEILADTF-KDYAVSTVPV--HDSLHLKSFCSMAGPNLIAIGSSEAAQKALKTMQQMSDH----RYDKLTVPDDAAANCIYLNIPSKGHVLL---HRAPEEYPESAKVFEKLKDHMLIPIANTELEKVDGALTCCSVL 253 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_99.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_99.17.1 >prot_C-australica_Contig_99.17.1 ID=prot_C-australica_Contig_99.17.1|Name=mRNA_C-australica_Contig_99.17.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=204bp MTRPGHPSREREVDAVREAFQTSPHLKRTKVVELQDASARVDGGDCLFTGback to top mRNA from alignment at C-australica_Contig_99:57773..61892+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_99.17.1 ID=mRNA_C-australica_Contig_99.17.1|Name=mRNA_C-australica_Contig_99.17.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4120bp|location=Sequence derived from alignment at C-australica_Contig_99:57773..61892+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_99:57773..61892+ >mRNA_C-australica_Contig_99.17.1 ID=mRNA_C-australica_Contig_99.17.1|Name=mRNA_C-australica_Contig_99.17.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=612bp|location=Sequence derived from alignment at C-australica_Contig_99:57773..61892+ (Chrysoparadoxa australica CS_1217)back to top |