mRNA_C-australica_Contig_99.16.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_99.16.1 vs. uniprot
Match: D8LB26_ECTSI (ELMO domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB26_ECTSI) HSP 1 Score: 225 bits (574), Expect = 1.080e-63 Identity = 174/534 (32.58%), Postives = 254/534 (47.57%), Query Frame = 1
Query: 163 ATVQVLFTLQGDADDPETGVSSTL-----TAPVPLTLAGLRDIFPYYGTYHFRLRIWDSDG-AEYVWLDLVRENEDLVEIAADLG-VEAGQS----PRELEVKVLPLSFELTPEEEA------QARLAELQMAGEKGGRPAVAEGAGVYQSGAEN-------------------AKAYSSGQHPSYRDHNHXXQRGSST----------------------------SGNPSPHGHDAVDEQEGPSYGDRWRTRL------------GADNKILDDVQAGVKTVLGSKAAQDIRKTGANMVKGVGMGAKMLFKKLNQGGSAARGEYPSPDALESLHIYAALLAKPVGS---EHADLMRELWDGLFPKAKGGYEVA-SPRWLRAGFQRQDPSQELRCWGLLTLKCMVYLCSSYGHKAQSMLEGQASKSDQNRAYPWAVVANNVVLMLAQVLSLKTQAFVRDRAVFWEVFAGPEAFYEVFCMVFRLLDHNWGELGATREKFGRVIGTTKVDLDRLLQTGPSSLEEFMNVALQSGLL 1524
++V V + +QGD DDPETGV S+ T P LTL LR++FP+ GT+HFRL++ D++G ++Y W+DL + +D++E+A +LG +E G S + + +K+LP+ F E EA +A A+ AGE G A G G+ GA + + G H +RG + G+ HG YG G D++ DD S+ +D +K + + K +G GAK ++ +N+G PS +A+E+LH A L P + EH + + ++W LFP + +E A SPRW AGFQ + S + R G+L LK MV+ C Y KA S+ Q++ + YPWAVVANN+ LMLA VL ++ F R +W VF AF+E+FCM FRLLDH W E GA R FG++IG TK + LL++ P +L FM A + G+L
Sbjct: 3 SSVLVCYVIQGDDDDPETGVQSSFRVDRPTPPRTLTLFRLREMFPFEGTFHFRLKVPDANGLSDYCWVDLTTDGDDILELAENLGGLEGGNSGGHPQQRVHLKILPIDFGGPVEHEAAENAPAEAVPAQDFYAGEGVG-VAHGPGLGLDAPGARGQATADEDLASGVSGMDIGGGERFDVGDHSGSGTRVARERRGERSFDVDXXXXXXXXXXXXXXXXXXXRSPVGGGSRGEHGDGGRXXXXXXXYGXXXXXXXXXXXXXXXXGAYGDDDE--DDTWKASVVNQASQGVKDFQKKTSQVAKTMGFGAKKMWNAINKG--VGGPVVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDDE--FEGAESPRWQEAGFQESNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSAGGSSH--YPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGML 527
BLAST of mRNA_C-australica_Contig_99.16.1 vs. uniprot
Match: A0A6H5KWK7_9PHAE (ELMO domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWK7_9PHAE) HSP 1 Score: 180 bits (457), Expect = 1.930e-48 Identity = 101/248 (40.73%), Postives = 142/248 (57.26%), Query Frame = 1
Query: 793 SKAAQDIRKTGANMVKGVGMGAKMLFKKLNQGGSAARGEYPSPDALESLHIYAALLAKPVGS---EHADLMRELWDGLFPKAKGGYE-VASPRWLRAGFQRQDPSQELRCWGLLTLKCMVYLCSSYGHKAQSMLEGQASKSDQNRAYPWAVVANNVVLMLAQVLSLKTQAFVRDRAVFWEVFAGPEAFYEVFCMVFRLLDHNWGELGATREKFGRVIGTTKVDLDRLLQTGPSSLEEFMNVALQSGLL 1524
S+ +D +K + + K +G GAK ++ +N+G PS +A+E+LH A L P + EH + + ++W LFP + +E V SPRW AGFQ + S + R G+L LK MV+ C Y KA S+ Q+ + YPWAVVANN+ LMLA VL ++ F R +W VF AF+E+FCM FRLLDH W E GA R FG++IG TK + LL++ P +L FM A + G+L
Sbjct: 118 SQGVKDFQKKTSQVAKTMGFGAKKMWNAINKG--VGGPVVPSEEAMENLHELANFLGTPFSATSREHVNDLGKVWMCLFPDEE--FEGVESPRWQEAGFQEPNVSLDFRGTGVLALKSMVFFCQEYDRKALSLCRAQSVGGSSH--YPWAVVANNLTLMLADVLEMRANQFASSRKGYWGVFDRRGAFFEIFCMAFRLLDHTWAERGAKRSNFGQIIGYTKSVIVELLESNPPNLPAFMGQAEEMGML 359
BLAST of mRNA_C-australica_Contig_99.16.1 vs. uniprot
Match: A0A835YT59_9STRA (ELMO/CED-12 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT59_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.120e-44 Identity = 166/525 (31.62%), Postives = 231/525 (44.00%), Query Frame = 1
Query: 181 FTLQGDADDPETGVSSTLTAPVP--LTLAGLRDIFPYYGTYHFRLRIWDSDG-AEYVWLDLVRENEDLVEIAADLG-VEAGQ--SPRELEVKVLPLSFELTPEEEAQARLAELQM----AGEKGGRPAVAEGAGVYQSGAENAKAYSSGQHPSYRDHNHXXQRGSSTSGNPSPHGHDAVDEQEG---PSYGDRW------------RTRLGADNKIL---------------------------------------DD--------VQAGVKTVLGSKAAQDIRKTGANMVKGVGMG-AKMLFKKLNQGGSAARGE--YPSPDALESLHIYAALLAKPVGS---EHADLMRELWDGLFPKAK---GGYEVASPRWLRAGFQRQDPSQELRCWGLLTLKCMVYLCSSYGHKAQSMLEGQASKSDQNRAYPWAVVANNVVLMLAQVLSLKTQAFVRDRAVFWEVFAGPEAFYEVFCMVFRLLDHNWGELGATREKFGRVIGTTKVDLDRLLQTGPSSLEEFMNVALQ 1512
+ LQG+ D PETGV S+L LTLA L+D+FPY GT+HFRL++ D+ G A +VWLDL +E +D+VE+A +LG +E S + VKVLPLSF+ P L Q+ PA A A V E+A ++ R+ GSS G H + Q PS G R LG+ + DD V + + + + S+AAQD+++ G+G A+ K+N+GG+ G P AL +L + L P H +L+ LW LFP A G SPRW AGFQ +L G L L+CMV L SS A ++L A+++ R YP+AVVA NV LMLA VL L + + RA +W +F +AF ++FC FR LD W E A+R+ FG+ L +GP ++ F+ A Q
Sbjct: 5 YVLQGEYDAPETGVESSLELQQEQDLTLAQLKDLFPYCGTFHFRLKVADNVGTAPHVWLDLTQEGDDIVELARNLGGIERAPRGSHEVVHVKVLPLSFD-APVLNGSDALPPDQIFDWNEDVSAAAPAAAAAAHVPAYNVEDAFVRAAAARDDAREFAEPPYLGSSGGGASRSTLHASAQGQRHVRRPSGGXXXXXXXAEGGSGHCRRPLGSSEHAVSPFDSPAQRRPSQXXXXXXXXXXXXRRGSGGMEFQQGDHDDSAQTWTASVNSTITSAINSRAAQDLKQAAK-----FGLGNARKFLSKINKGGAGGGGPSTLPPVSALATLDDLSHHLETPFNDGVRSHFELLSRLWGLLFPDAPPLAGNGGAVSPRWREAGFQADSVDGDLDHTGTLCLRCMVTLLSSAD--APALLRANAARAPPRR-YPFAVVARNVTLMLADVLRLGGRGYCEARASYWGLFERADAFEQLFCWAFRRLDAVWAERNASRDAFGQXXXXXXXXXXXALGSGPETVAAFLERAAQ 520
BLAST of mRNA_C-australica_Contig_99.16.1 vs. uniprot
Match: A0A7S2RLL0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLL0_9STRA) HSP 1 Score: 139 bits (349), Expect = 1.800e-32 Identity = 127/478 (26.57%), Postives = 198/478 (41.42%), Query Frame = 1
Query: 148 IEARMATVQVLFTLQGDADDPETGVSSTLTAPVPLTLAGLRDIFPYYGTYHFRLRIWDSDGAEYVWLDLVREN-------EDLVEIAADLGVEAGQSPRELEVKVLPLSFELTPEEEAQARLAELQMA--GEKGGRPAVAEGAGVYQSGAENAKAYSSGQHPSYRDHNHXXQRGSSTSGNPSPHGHDAVDEQEGPSYGDRWRTRLGADNKILDDVQAGVKTVLGSKAAQDIRKTGANMVKGVGM--GAKMLFKKLNQGGSAARGE-YPSPDALESLHIYAALLAKPVGSE---HADLMRELWDGLFPKAKGGYEVASPRWLRAGFQRQDPSQELRCWGLLTLKCMVYLCSSYGHKAQSMLEGQASKSDQNRAYPWAVVANNVVLMLAQVLSLKTQAFVRDRAVFWEVFAGPEA-----FYEVFCMVFRLLDHNWGELGATREKFGRVIGTTKVDLDRLLQTGPSSLEEFMNVALQSGL 1521
+ MA V+ ++ + + S P PL+LA LR+ FP+ G +HFRL++ D +VW D+V + +D V I A V G P ++ P E T + + A + M+ G+ G + G V +S + G S +Q + ++ S AA + + M K V + M K GG AR PSP A + L + + P+ + H M+ LW F A + SPRW GF D +++ G+L + + Y +Y HKA SM E Q +D + YP VVA N+ +ML VL L+ F FW++F P+ F EVF + FR++D W + ATR+ FG ++ +TK + LL GP+SL+E M+ A+++G+
Sbjct: 2 VRGGMAVEAVVVQFDVSSESCSSELVSC-AVPAPLSLASLREAFPFEGVFHFRLQVPDQQSG-HVWEDVVSDEPLASVSGQDSVTIRAVHLVLPGVDPAFSGQELCPYWDEETDRQGRRGFQAPVWMSKLGDMGSKLGELAGQTVRRSEIQGV----------------------------------------GKSVATGTEQLXXXXXXXXXHLQTKFEEMMSSDAAVKLTQGSVKMGKAVSRLWSSGMQAVKSFAGGDEARAPALPSPTAEKCLEFLGSEASTPLDTMNPIHVGSMKRLWLSCF--ADQPFTAVSPRWKTLGFLNDDLGKDVGKSGVLAVHSLAYFADTYQHKAISMFEAQRPNTDNH--YPVGVVAVNLTMMLTDVLGLRQGKFSSSPRTFWQLFERPDPQDMAPFCEVFSLAFRVIDREWADRNATRKDFGPIMASTKQTVVELLDQGPASLDELMDRAIKAGV 433
BLAST of mRNA_C-australica_Contig_99.16.1 vs. uniprot
Match: A0A7S1C9A2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9A2_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 5.150e-19 Identity = 66/214 (30.84%), Postives = 105/214 (49.07%), Query Frame = 1
Query: 925 ALESLHIYAALLAKPVGSEHADLMRELWDGLF--PKA--KGGYEVASPRWLRAGFQRQDPSQELRCWGLLTLKCMVYLCSSYGHKAQSML-------EGQASKSDQNR-----AYPWAVVANNVVLMLAQVLSLK--TQAFVRDRAV-------FWEVFAGP-EAFYEVFCMVFRLLDHNWGELGATREKFGRVIGTTKVDLDRLLQTGPSSLE 1488
AL +LH +H L+R LW+ + P A + + SP W+ GFQR+DP+ + R G+L L+ +VY + +G K + +L EG D R YP+A+V N+ M A+++ L QA A FW + A +AF+E++C+ F LLD W GA+ F V+ T+++++ LL T P++ E
Sbjct: 33 ALGALHARLGEAYDQREPDHVGLLRTLWEAIVSPPGAPVQRPFASVSPLWMDRGFQREDPTTDFRGGGVLALENLVYFATHHGDKVRQILATTARDDEGARGVGDDGRPVAPKCYPFAIVGVNLTRMCAELVHLTGGAQAVQFSAAALAAACPSFWRLSASSRDAFHELYCVAFLLLDRRWRTTGASITDFADVLAATRLEVESLLATNPTTTE 246
BLAST of mRNA_C-australica_Contig_99.16.1 vs. uniprot
Match: A0A251UQV7_HELAN (Putative ELMO/CED-12 family protein n=5 Tax=Asteroideae TaxID=102804 RepID=A0A251UQV7_HELAN) HSP 1 Score: 88.6 bits (218), Expect = 5.100e-16 Identity = 60/187 (32.09%), Postives = 103/187 (55.08%), Query Frame = 1
Query: 979 EHADLMRELWDGLFPKAKGGYEVASPRWLRAGFQRQDPSQELRCWGLLTLKCMVYLCSSYGHKAQSMLEGQASKSDQNRA---YPWAVVANNVVLMLAQVLSL---KTQAFVRDRAVFWEVFAGPEAFYEV-FCMVFRLLDHNWGELGATREKFGRVIGTTKVDLDR-LLQTGPSSLEEFMNVALQS 1515
EH + +R LW FP+ + ++ S +W G+Q +DPS + R G ++L+ ++Y ++ Q +L K + RA YP+AV N+ ML Q+L L K Q+FV A F ++ + E+ +++ +C+ F+L+DH W ++ A+ F V+ +T+ L+R LLQ + LEE + L S
Sbjct: 86 EHQEALRALWKAAFPEEELR-DIISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFARNFPKSFQDLLR----KQEGVRAMWEYPFAVAGVNITFMLIQMLDLEAVKPQSFVG--ATFLKLLSENESAFDLLYCITFKLMDHQWLDMHASYMDFNAVMKSTRRQLERELLQEDITRLEELPSYNLLS 265
BLAST of mRNA_C-australica_Contig_99.16.1 vs. uniprot
Match: A0A5B6ZJZ8_DAVIN (Putative ELMO/CED-12 family protein isoform 1 n=3 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZJZ8_DAVIN) HSP 1 Score: 88.2 bits (217), Expect = 6.920e-16 Identity = 59/186 (31.72%), Postives = 100/186 (53.76%), Query Frame = 1
Query: 979 EHADLMRELWDGLFPKAKGGYEVASPRWLRAGFQRQDPSQELRCWGLLTLKCMVYLCSSYGHKAQSMLEGQASKSDQNRA---YPWAVVANNVVLMLAQVLSLKTQAFVRDR----AVFWEVFAGPEAFYEV-FCMVFRLLDHNWGELGATREKFGRVIGTTKVDLDR-LLQTGPSSLEEFMNVAL 1509
EH + +R LW+ FP+ + + S +W G+Q +DPS + R G ++L+ ++Y SY Q +L K + +RA YP+AV N+ ML Q+L L+ + + R A F + A E+ +++ +C+ F+L+DH W + A+ F V+ T+ L+R LLQ + LEE + +L
Sbjct: 86 EHQEALRSLWNAAFPEEEL-QGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFARSYPKSFQDLLR----KQEGDRAMWEYPFAVAGVNITFMLIQMLDLEAE---KPRTMVGATFLKFLAENESAFDLLYCITFKLMDHQWLAMHASYMDFNAVMKATRRQLERELLQEDITQLEELPSYSL 263
BLAST of mRNA_C-australica_Contig_99.16.1 vs. uniprot
Match: A0A484LIJ6_9ASTE (ELMO domain-containing protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484LIJ6_9ASTE) HSP 1 Score: 85.1 bits (209), Expect = 1.840e-15 Identity = 55/170 (32.35%), Postives = 91/170 (53.53%), Query Frame = 1
Query: 976 SEHADLMRELWDGLFPKAKGGYEVASPRWLRAGFQRQDPSQELRCWGLLTLKCMVYLCSSYGHKAQSMLEGQASKSDQNRA---YPWAVVANNVVLMLAQVLSL---KTQAFVRDRAVFWEVFAGPEAFYEV-FCMVFRLLDHNWGELGATREKFGRVIGTTKVDLDRLL 1464
SEH +R LWD FP + +++ S +W G+Q +DPS + R G ++L+ ++Y +Y Q +L K + NR+ YP+AV N+ ML Q+L L K Q V A F + A E+ +++ +C+ F+L+DH W + A+ F V+ T+ L++ L
Sbjct: 10 SEHQAALRALWDSAFP-GEELHDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFSKNYPKSFQDLL----LKREGNRSMWEYPFAVAGVNITFMLIQMLDLEAVKPQRLVG--ATFLKFLADNESAFDLLYCIAFKLMDHQWLSMRASYMDFNTVMKATRRQLEKEL 172
BLAST of mRNA_C-australica_Contig_99.16.1 vs. uniprot
Match: A0A328EBQ4_9ASTE (ELMO domain-containing protein n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328EBQ4_9ASTE) HSP 1 Score: 85.5 bits (210), Expect = 4.160e-15 Identity = 53/168 (31.55%), Postives = 91/168 (54.17%), Query Frame = 1
Query: 976 SEHADLMRELWDGLFPKAKGGYEVASPRWLRAGFQRQDPSQELRCWGLLTLKCMVYLCSSYGHKAQSMLEGQASKSDQNRA---YPWAVVANNVVLMLAQVLSLKTQAFVR-DRAVFWEVFAGPEAFYEV-FCMVFRLLDHNWGELGATREKFGRVIGTTKVDLDRLL 1464
SEH +R LWD FP + +++ S +W G+Q +DPS + R G ++L+ ++Y +Y Q +L K + NR+ YP+AV N+ ML Q+L L+ +R A F + A E+ +++ +C+ F+L+DH W + A+ F V+ T+ L++ L
Sbjct: 65 SEHQAALRALWDSAFP-GEELHDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFSKNYPKSFQDLL----LKREGNRSMWEYPFAVAGVNITFMLIQMLDLEAVKPLRLVGATFLKFLADNESAFDLLYCIAFKLMDHQWLSMRASYMDFNTVMKATRRQLEKEL 227
BLAST of mRNA_C-australica_Contig_99.16.1 vs. uniprot
Match: A0A2J6KU01_LACSA (ELMO domain-containing protein n=4 Tax=Lactuca TaxID=4235 RepID=A0A2J6KU01_LACSA) HSP 1 Score: 85.5 bits (210), Expect = 6.100e-15 Identity = 56/185 (30.27%), Postives = 101/185 (54.59%), Query Frame = 1
Query: 979 EHADLMRELWDGLFPKAKGGYEVASPRWLRAGFQRQDPSQELRCWGLLTLKCMVYLCSSYGHKAQSMLEGQASKSDQNRA---YPWAVVANNVVLMLAQVLSL---KTQAFVRDRAVFWEVFAGPEAFYEV-FCMVFRLLDHNWGELGATREKFGRVIGTTKVDLDR-LLQTGPSSLEEFMNVAL 1509
EH + ++ LW FP+ + ++ S +W G+Q +DPS + R G ++L+ ++Y ++ Q +L K + +RA YP+AV N+ ML Q+L L K ++FV A F + + E+ +++ +C+ F+L+DH W + A+ F V+ +T+ L+R LLQ + +EE + L
Sbjct: 89 EHQEALKALWKAAFPEEELS-DLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFARNFQKSFQDLLR----KQEGDRAMWEYPFAVAGVNITFMLIQMLDLEAVKPRSFVG--ATFLKFLSENESAFDLLYCITFKLMDHQWLAMHASYMDFNTVMKSTRRQLERELLQDNVNRIEELPSYGL 266 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_99.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_99.16.1 >prot_C-australica_Contig_99.16.1 ID=prot_C-australica_Contig_99.16.1|Name=mRNA_C-australica_Contig_99.16.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=457bp MATVQVLFTLQGDADDPETGVSSTLTAPVPLTLAGLRDIFPYYGTYHFRLback to top mRNA from alignment at C-australica_Contig_99:54928..57519+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_99.16.1 ID=mRNA_C-australica_Contig_99.16.1|Name=mRNA_C-australica_Contig_99.16.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2592bp|location=Sequence derived from alignment at C-australica_Contig_99:54928..57519+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_99:54928..57519+ >mRNA_C-australica_Contig_99.16.1 ID=mRNA_C-australica_Contig_99.16.1|Name=mRNA_C-australica_Contig_99.16.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1371bp|location=Sequence derived from alignment at C-australica_Contig_99:54928..57519+ (Chrysoparadoxa australica CS_1217)back to top |