mRNA_C-australica_Contig_9897.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_9897.1.1 vs. uniprot
Match: A0A6F8Q8G4_9RHOB (Lipid kinase n=9 Tax=Rhodobacterales TaxID=204455 RepID=A0A6F8Q8G4_9RHOB) HSP 1 Score: 340 bits (871), Expect = 5.160e-115 Identity = 175/194 (90.21%), Postives = 182/194 (93.81%), Query Frame = 1 Query: 1 MFARRQFVATCAALALAAATPATAQDKTDFRVAWSIYVGWMPWGYLDESGIMDKWAEKYGITVEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVIVKGDTGLADLAGKPVNLVELSVSHYLLARALDSVGLQERDLGGVLNTSDADMIAAFTTADVEAVVTWNPLVSTI 582 MFARR F+A AALA+ PA AQ+KTDFRVAWSIYVGWMPWGYLDESGIMDKWAEKYGITV+IVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVIVK D GLADLAGKPVNLVELSVSHYLLARALDSV L ERDLGGV+NTSDADMIAAFTT+DV+AVVTWNPLVSTI Sbjct: 1 MFARRHFMAATAALAMLVGAPALAQEKTDFRVAWSIYVGWMPWGYLDESGIMDKWAEKYGITVDIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVIVK-DGGLADLAGKPVNLVELSVSHYLLARALDSVDLAERDLGGVINTSDADMIAAFTTSDVQAVVTWNPLVSTI 193
BLAST of mRNA_C-australica_Contig_9897.1.1 vs. uniprot
Match: UPI000FD8A7CB (putative urea ABC transporter substrate-binding protein n=1 Tax=Rhodobacterales TaxID=204455 RepID=UPI000FD8A7CB) HSP 1 Score: 321 bits (823), Expect = 1.040e-107 Identity = 163/190 (85.79%), Postives = 172/190 (90.53%), Query Frame = 1 Query: 13 RQFVATCAALALAAATPATAQDKTDFRVAWSIYVGWMPWGYLDESGIMDKWAEKYGITVEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVIVKGDTGLADLAGKPVNLVELSVSHYLLARALDSVGLQERDLGGVLNTSDADMIAAFTTADVEAVVTWNPLVSTI 582 R A AAL + A PA AQD+T+FRVAWSIYVGWMPWGYL++SGIMDKWAEKYGI VEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFS+GNDAVI+KGD LADLAGKPVNLVELSVSHYLLARALDSVGL+E DL V+NTSDADMIAAF T DVEAVVTWNPLVSTI Sbjct: 5 RTIAAVAAALTIGATAPAVAQDRTEFRVAWSIYVGWMPWGYLEDSGIMDKWAEKYGIDVEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSDGNDAVILKGDGELADLAGKPVNLVELSVSHYLLARALDSVGLREADLASVINTSDADMIAAFATPDVEAVVTWNPLVSTI 194
BLAST of mRNA_C-australica_Contig_9897.1.1 vs. uniprot
Match: A0A1I6CMT2_9RHOB (NitT/TauT family transport system substrate-binding protein n=1 Tax=Poseidonocella sedimentorum TaxID=871652 RepID=A0A1I6CMT2_9RHOB) HSP 1 Score: 321 bits (823), Expect = 1.350e-107 Identity = 159/181 (87.85%), Postives = 173/181 (95.58%), Query Frame = 1 Query: 40 LALAAATPATAQDKTDFRVAWSIYVGWMPWGYLDESGIMDKWAEKYGITVEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVIVKGDTGLADLAGKPVNLVELSVSHYLLARALDSVGLQERDLGGVLNTSDADMIAAFTTADVEAVVTWNPLVSTI 582 +A AA +PATAQ+KT+F++AWSIYVGWMPWGYLDESGIMDKWAEKYGITV+IVQINDYVESINQYTAGAFDGVSATNMDTLSIP+GGGVDTTALIVGD+SNGNDAVI+KG+ GLADLAGKPVNLVELSVSHYLLAR LDSVGL ERDL GV+NTSDADMIAA+ T+DVEAVVTWNPLVS I Sbjct: 21 IAAAAMSPATAQEKTEFKLAWSIYVGWMPWGYLDESGIMDKWAEKYGITVDIVQINDYVESINQYTAGAFDGVSATNMDTLSIPSGGGVDTTALIVGDYSNGNDAVILKGEGGLADLAGKPVNLVELSVSHYLLARGLDSVGLSERDLDGVINTSDADMIAAYATSDVEAVVTWNPLVSEI 201
BLAST of mRNA_C-australica_Contig_9897.1.1 vs. uniprot
Match: A0A0B4C037_9RHOB (Lipid kinase n=1 Tax=Tateyamaria sp. ANG-S1 TaxID=1577905 RepID=A0A0B4C037_9RHOB) HSP 1 Score: 320 bits (821), Expect = 1.830e-107 Identity = 162/187 (86.63%), Postives = 174/187 (93.05%), Query Frame = 1 Query: 22 VATCAALALAAATPATAQDKTDFRVAWSIYVGWMPWGYLDESGIMDKWAEKYGITVEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVIVKGDTGLADLAGKPVNLVELSVSHYLLARALDSVGLQERDLGGVLNTSDADMIAAFTTADVEAVVTWNPLVSTI 582 +AT ALAL AT A AQ+KTDF+VAWSIYVGWMPWGYL++SGIMDKWA+KYGI VEIVQINDYVESINQYTAG FDGVSATNMDTLSIPAGGGVDTTALIVGD+SNGNDA+IVKGD +ADLAGKPVNLVELSVSHYLLARALDSVGL ERDLGGV+NTSDADMIAA+ T +VEAVVTWNPLVSTI Sbjct: 4 LATTTALALGLATGAFAQEKTDFKVAWSIYVGWMPWGYLEDSGIMDKWADKYGIDVEIVQINDYVESINQYTAGQFDGVSATNMDTLSIPAGGGVDTTALIVGDYSNGNDALIVKGDGNIADLAGKPVNLVELSVSHYLLARALDSVGLAERDLGGVINTSDADMIAAYATDEVEAVVTWNPLVSTI 190
BLAST of mRNA_C-australica_Contig_9897.1.1 vs. uniprot
Match: A0A1M5LQ96_9RHOB (NitT/TauT family transport system substrate-binding protein n=1 Tax=Marivita hallyeonensis TaxID=996342 RepID=A0A1M5LQ96_9RHOB) HSP 1 Score: 319 bits (817), Expect = 8.460e-107 Identity = 164/194 (84.54%), Postives = 174/194 (89.69%), Query Frame = 1 Query: 1 MFARRQFVATCAALALAAATPATAQDKTDFRVAWSIYVGWMPWGYLDESGIMDKWAEKYGITVEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVIVKGDTGLADLAGKPVNLVELSVSHYLLARALDSVGLQERDLGGVLNTSDADMIAAFTTADVEAVVTWNPLVSTI 582 M A R F AAL+++ +TPA AQ+KTDFRVAWSIYVGWMPWGYL+ESGIMDKWAEKYGI VEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVI+KG+ LA L GKPVNLVELSVSHYLLA ALDSVGL+E DL V+NTSDADMIAAF T DVEAVVTWNPLVSTI Sbjct: 1 MSALRHFAIGAAALSMSLSTPALAQEKTDFRVAWSIYVGWMPWGYLEESGIMDKWAEKYGIDVEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVILKGEGDLASLEGKPVNLVELSVSHYLLALALDSVGLREADLASVINTSDADMIAAFQTDDVEAVVTWNPLVSTI 194
BLAST of mRNA_C-australica_Contig_9897.1.1 vs. uniprot
Match: UPI000E1BA905 (putative urea ABC transporter substrate-binding protein n=1 Tax=Jannaschia formosa TaxID=2259592 RepID=UPI000E1BA905) HSP 1 Score: 318 bits (814), Expect = 2.190e-106 Identity = 168/194 (86.60%), Postives = 176/194 (90.72%), Query Frame = 1 Query: 1 MFARRQFVATCAALALAAATPATAQDKTDFRVAWSIYVGWMPWGYLDESGIMDKWAEKYGITVEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVIVKGDTGLADLAGKPVNLVELSVSHYLLARALDSVGLQERDLGGVLNTSDADMIAAFTTADVEAVVTWNPLVSTI 582 M ARR +AT A+AL A PA AQ+KTDFRVAWSIYVGWMPWGYL++SGIMDKWAEKYGI VEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAG GVDTTALIVGDFSNGNDAVIVK + GLADLAGKPV+LVELSVSHYLLARALDSVGL E DL GV+NTSDADMIAAF T DVEAVVTWNPLVSTI Sbjct: 1 MTARR--IATATAIALTLAAPAFAQEKTDFRVAWSIYVGWMPWGYLEDSGIMDKWAEKYGIDVEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGSGVDTTALIVGDFSNGNDAVIVK-EGGLADLAGKPVHLVELSVSHYLLARALDSVGLTEADLAGVVNTSDADMIAAFQTDDVEAVVTWNPLVSTI 191
BLAST of mRNA_C-australica_Contig_9897.1.1 vs. uniprot
Match: A0A8J8B7Z0_9RHOB (Putative urea ABC transporter substrate-binding protein n=1 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J8B7Z0_9RHOB) HSP 1 Score: 318 bits (814), Expect = 2.340e-106 Identity = 160/190 (84.21%), Postives = 172/190 (90.53%), Query Frame = 1 Query: 13 RQFVATCAALALAAATPATAQDKTDFRVAWSIYVGWMPWGYLDESGIMDKWAEKYGITVEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVIVKGDTGLADLAGKPVNLVELSVSHYLLARALDSVGLQERDLGGVLNTSDADMIAAFTTADVEAVVTWNPLVSTI 582 R +A AL+L A PA AQ+KT+FRVAWSIYVGWMPWGYLD+SGIMDKWAEKYGI VEIVQINDYVESINQYTAGAFDGV+ATNMDTLSIP+GGGVDTTALIVGDFSNGNDAVI+KG+ GLADLAGKPVNLVELSVSHYLLARALDS GL E DL GV+NTSDADMIAA+ T DV+AVVTWNPLVS I Sbjct: 4 RTLLAATTALSLLAGLPAMAQEKTEFRVAWSIYVGWMPWGYLDDSGIMDKWAEKYGIDVEIVQINDYVESINQYTAGAFDGVTATNMDTLSIPSGGGVDTTALIVGDFSNGNDAVILKGEGGLADLAGKPVNLVELSVSHYLLARALDSAGLSEADLAGVINTSDADMIAAYATDDVQAVVTWNPLVSAI 193
BLAST of mRNA_C-australica_Contig_9897.1.1 vs. uniprot
Match: UPI001552F976 (putative urea ABC transporter substrate-binding protein n=1 Tax=Pseudoruegeria sp. HB172150 TaxID=2721164 RepID=UPI001552F976) HSP 1 Score: 317 bits (811), Expect = 6.240e-106 Identity = 165/194 (85.05%), Postives = 175/194 (90.21%), Query Frame = 1 Query: 1 MFARRQFVATCAALALAAATPATAQDKTDFRVAWSIYVGWMPWGYLDESGIMDKWAEKYGITVEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVIVKGDTGLADLAGKPVNLVELSVSHYLLARALDSVGLQERDLGGVLNTSDADMIAAFTTADVEAVVTWNPLVSTI 582 M A+R +A A LALAA PA AQ+KT+FRVAWSIYVGWMPWGYL+ESGIMDKWAEKYGI VEIVQINDYVESINQYTAGAFDGV+ATNMDTLSIPAG GVDTTALIVGD+SNGNDAVI+KGD LADLAGKPVNLVELSVSHYLLAR LD VGL E DLGGV+NTSDADMIAA+ T DVEAVVTWNPLVSTI Sbjct: 1 MLAKR--IAAAAVLALAA-VPALAQEKTEFRVAWSIYVGWMPWGYLEESGIMDKWAEKYGIDVEIVQINDYVESINQYTAGAFDGVTATNMDTLSIPAGSGVDTTALIVGDYSNGNDAVIMKGDGVLADLAGKPVNLVELSVSHYLLARGLDQVGLSEADLGGVINTSDADMIAAYATNDVEAVVTWNPLVSTI 191
BLAST of mRNA_C-australica_Contig_9897.1.1 vs. uniprot
Match: A0A1I3I9C5_9RHOB (NitT/TauT family transport system substrate-binding protein n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A1I3I9C5_9RHOB) HSP 1 Score: 315 bits (807), Expect = 2.880e-105 Identity = 159/190 (83.68%), Postives = 169/190 (88.95%), Query Frame = 1 Query: 13 RQFVATCAALALAAATPATAQDKTDFRVAWSIYVGWMPWGYLDESGIMDKWAEKYGITVEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVIVKGDTGLADLAGKPVNLVELSVSHYLLARALDSVGLQERDLGGVLNTSDADMIAAFTTADVEAVVTWNPLVSTI 582 + VA LA A A+PA AQ+KTDF +AWSIYVGWMPWGYLDESGIMDKWAEKYGITV+IVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALI+GDFSNGNDAVI GDT L DLAG VNLVELSVSHYLLARALD+VGL ERDL GV+NTSDADMIAAF +ADV+ VVTWNPLVS I Sbjct: 5 KYLVAAAIGLATATASPAVAQEKTDFSIAWSIYVGWMPWGYLDESGIMDKWAEKYGITVDIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIIGDFSNGNDAVIATGDTTLEDLAGTSVNLVELSVSHYLLARALDTVGLSERDLAGVVNTSDADMIAAFASADVDTVVTWNPLVSEI 194
BLAST of mRNA_C-australica_Contig_9897.1.1 vs. uniprot
Match: UPI001ADFDCC8 (putative urea ABC transporter substrate-binding protein n=1 Tax=Sagittula salina TaxID=2820268 RepID=UPI001ADFDCC8) HSP 1 Score: 314 bits (804), Expect = 7.950e-105 Identity = 158/189 (83.60%), Postives = 173/189 (91.53%), Query Frame = 1 Query: 22 VATCAALALAAAT--PATAQDKTDFRVAWSIYVGWMPWGYLDESGIMDKWAEKYGITVEIVQINDYVESINQYTAGAFDGVSATNMDTLSIPAGGGVDTTALIVGDFSNGNDAVIVKGDTGLADLAGKPVNLVELSVSHYLLARALDSVGLQERDLGGVLNTSDADMIAAFTTADVEAVVTWNPLVSTI 582 + T AA++L A T P A++KT+F++AWSIYVGWMPWGYL++SGIMDKWAEKYGI VEIVQINDYVESINQYTAG FDGVSATNMDTLSIPAGGG+DTTALIVGD+SNGNDAVIVKGD GLADL GKPVNLVELSVSHYLLAR LDSVGL ERDLGGV+NTSDADMIAA+TT DV+AVVTWNPLVS I Sbjct: 5 ILTAAAVSLLATTAMPVLAEEKTEFKLAWSIYVGWMPWGYLEDSGIMDKWAEKYGIDVEIVQINDYVESINQYTAGQFDGVSATNMDTLSIPAGGGIDTTALIVGDYSNGNDAVIVKGDGGLADLKGKPVNLVELSVSHYLLARGLDSVGLSERDLGGVVNTSDADMIAAYTTDDVQAVVTWNPLVSEI 193 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9897.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9897.1.1 >prot_C-australica_Contig_9897.1.1 ID=prot_C-australica_Contig_9897.1.1|Name=mRNA_C-australica_Contig_9897.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=194bp MFARRQFVATCAALALAAATPATAQDKTDFRVAWSIYVGWMPWGYLDESGback to top mRNA from alignment at C-australica_Contig_9897:271..852+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_9897.1.1 ID=mRNA_C-australica_Contig_9897.1.1|Name=mRNA_C-australica_Contig_9897.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=582bp|location=Sequence derived from alignment at C-australica_Contig_9897:271..852+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_9897:271..852+ >mRNA_C-australica_Contig_9897.1.1 ID=mRNA_C-australica_Contig_9897.1.1|Name=mRNA_C-australica_Contig_9897.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=582bp|location=Sequence derived from alignment at C-australica_Contig_9897:271..852+ (Chrysoparadoxa australica CS_1217)back to top |