mRNA_C-australica_Contig_9874.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match: A0A2D6TWY9_9PROT (CopG family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D6TWY9_9PROT) HSP 1 Score: 107 bits (266), Expect = 7.320e-29 Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 1 Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216 MKA DLDKKFD KED+LD FD +ATR N E KRVNVDFP WMV+SL++E+ RLG+TRQSLIK+W+ADRL+ Sbjct: 1 MKAHDLDKKFDNNKEDVLDHFDLDTATRPNREAKRVNVDFPSWMVESLDKEAQRLGVTRQSLIKLWLADRLE 72
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match: UPI001BC0EF17 (Antitoxin n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=UPI001BC0EF17) HSP 1 Score: 105 bits (262), Expect = 2.820e-28 Identity = 49/75 (65.33%), Postives = 64/75 (85.33%), Query Frame = 1 Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLKVLG 225 MKA++LDKKFD G ED++D FD +A R N EQKRVNVDFP WMV+SL++E++RLG+TRQS+IK+WIA+RL+ G Sbjct: 1 MKASELDKKFDEGVEDVIDEFDLSTAMRPNREQKRVNVDFPLWMVESLDREASRLGVTRQSIIKVWIAERLEKAG 75
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match: A0A0M2VHV5_9GAMM (CopG family transcriptional regulator n=1 Tax=Arsukibacterium sp. MJ3 TaxID=1632859 RepID=A0A0M2VHV5_9GAMM) HSP 1 Score: 103 bits (256), Expect = 3.340e-27 Identity = 43/72 (59.72%), Postives = 65/72 (90.28%), Query Frame = 1 Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216 MKA++LD+KFD ++D+L+ FD +ATRINH+QKR+NVDFP+W+V SL++E++R+G+TRQS+IKMW+ +RL+ Sbjct: 1 MKASELDRKFDENQQDVLEHFDLSTATRINHKQKRINVDFPEWVVSSLDREASRIGVTRQSIIKMWLVERLE 72
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match: A0A2N3G9C1_9ACTN (CopG family transcriptional regulator n=1 Tax=Actinobacteria bacterium HGW-Actinobacteria-10 TaxID=2013645 RepID=A0A2N3G9C1_9ACTN) HSP 1 Score: 102 bits (253), Expect = 6.650e-27 Identity = 47/75 (62.67%), Postives = 62/75 (82.67%), Query Frame = 1 Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLKVLG 225 MK +D+DK+FD G ED++D FD ATR N E KRVNVDFP WMV+SL++E++RLG+TRQS+IK+WIA+RL+ G Sbjct: 1 MKTSDMDKRFDEGIEDVIDDFDLSKATRPNREPKRVNVDFPVWMVESLDREAHRLGVTRQSIIKVWIAERLERAG 75
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match: A0A2G2LNF0_9GAMM (CopG family transcriptional regulator n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2G2LNF0_9GAMM) HSP 1 Score: 102 bits (253), Expect = 7.230e-27 Identity = 48/75 (64.00%), Postives = 60/75 (80.00%), Query Frame = 1 Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLKVLG 225 MKA ++DKKFD KEDILDAFD A R N EQKRVNVDFP WMV SL++E+ LG+TRQS+IK+W+A+RL+ + Sbjct: 1 MKAKEIDKKFDDNKEDILDAFDLSKARRPNQEQKRVNVDFPTWMVTSLDKEARHLGVTRQSIIKVWLAERLEKIA 75
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match: A0A2N1XLI1_9GAMM (CopG family transcriptional regulator n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-3 TaxID=2013799 RepID=A0A2N1XLI1_9GAMM) HSP 1 Score: 100 bits (250), Expect = 2.450e-26 Identity = 45/72 (62.50%), Postives = 59/72 (81.94%), Query Frame = 1 Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216 MKA D DKKFDLG DI+D D +A RIN EQKR+NVDFP W+V+SL++E+ R+G+TRQS+IK+W+ +RLK Sbjct: 1 MKAKDFDKKFDLGNRDIIDDLDLSTARRINQEQKRINVDFPAWVVESLDREAARIGVTRQSIIKVWLVERLK 72
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match: UPI000586DC7A (hypothetical protein n=1 Tax=Paraglaciecola arctica TaxID=1128911 RepID=UPI000586DC7A) HSP 1 Score: 100 bits (249), Expect = 3.780e-26 Identity = 43/71 (60.56%), Postives = 63/71 (88.73%), Query Frame = 1 Query: 4 KATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216 KAT+ D+KFD +EDIL+ FD +ATRIN++QKR+NVDFP+W+V SL++E++R+G+TRQS+IKMW+ +RL+ Sbjct: 4 KATEFDRKFDENQEDILEHFDLSTATRINYKQKRINVDFPEWVVNSLDREASRIGVTRQSIIKMWLVERLE 74
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match: UPI001906D134 (CopG family transcriptional regulator n=1 Tax=Thiohalocapsa halophila TaxID=69359 RepID=UPI001906D134) HSP 1 Score: 99.8 bits (247), Expect = 5.940e-26 Identity = 47/72 (65.28%), Postives = 61/72 (84.72%), Query Frame = 1 Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216 MKA +LDK+FD GKE+ILDAFD +A R N KRVNVDFP WMV SL++E++RLG+TRQS+IK+W+A+RL+ Sbjct: 1 MKAHELDKRFDEGKEEILDAFDLATAHRPNQASKRVNVDFPAWMVDSLDREASRLGVTRQSIIKIWLAERLE 72
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match: A0A557RKI4_9GAMM (CopG family transcriptional regulator n=2 Tax=Spiribacter TaxID=1335745 RepID=A0A557RKI4_9GAMM) HSP 1 Score: 99.8 bits (247), Expect = 8.540e-26 Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 1 Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216 MKA D DKKFD G EDI+D D K+A R N E KRVNVDFP W+V+SL+QES R+G+TRQS+IK+W+ +RL+ Sbjct: 1 MKAEDFDKKFDEGAEDIIDDLDLKTARRANQESKRVNVDFPAWVVESLDQESARIGVTRQSIIKVWLVERLR 72
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Match: UPI0004704C05 (hypothetical protein n=1 Tax=Salinivibrio socompensis TaxID=1510206 RepID=UPI0004704C05) HSP 1 Score: 99.0 bits (245), Expect = 1.630e-25 Identity = 44/72 (61.11%), Postives = 59/72 (81.94%), Query Frame = 1 Query: 1 MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQESNRLGITRQSLIKMWIADRLK 216 MKA D DKKFD GK+DI+D D +A R N EQKR+NVDFP W+V+SL++E+ R+G+TRQS+IK+W+ +RLK Sbjct: 1 MKAKDFDKKFDEGKQDIIDDLDLSTARRANQEQKRINVDFPSWVVESLDREAARVGVTRQSIIKVWLVERLK 72 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9874.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9874.1.1 >prot_C-australica_Contig_9874.1.1 ID=prot_C-australica_Contig_9874.1.1|Name=mRNA_C-australica_Contig_9874.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=76bp MKATDLDKKFDLGKEDILDAFDPKSATRINHEQKRVNVDFPKWMVKSLNQback to top mRNA from alignment at C-australica_Contig_9874:204..431- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_9874.1.1 ID=mRNA_C-australica_Contig_9874.1.1|Name=mRNA_C-australica_Contig_9874.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=228bp|location=Sequence derived from alignment at C-australica_Contig_9874:204..431- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_9874:204..431- >mRNA_C-australica_Contig_9874.1.1 ID=mRNA_C-australica_Contig_9874.1.1|Name=mRNA_C-australica_Contig_9874.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=228bp|location=Sequence derived from alignment at C-australica_Contig_9874:204..431- (Chrysoparadoxa australica CS_1217)back to top |