mRNA_C-australica_Contig_987.1.4 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_987.1.4 vs. uniprot
Match: A0A7S2DYA4_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DYA4_9STRA) HSP 1 Score: 286 bits (732), Expect = 2.410e-84 Identity = 173/444 (38.96%), Postives = 264/444 (59.46%), Query Frame = 2 Query: 941 VAKNHLSRAEAMEVCLRGHHCIAKNSDGRKTFVVADGSCQLLKSFGRTKISMGPLVGAPYEAVFEFTGGKLKRVEGTLMLEDGDDKSFGEWKGFNALDTERDNRHVIDDNRAQQLTPEEVKKMQ-DAGTSGTEIIKALAENSATFQSKTEFSQQKWLAKKSQKYCPRMRLVKCTAETVCEAYQEKKTRQMAGLLGSTLGLILLHSNVYAGCKAMVYDGILGVVLGAVMERMGLQGRVMAPYPGQTLAADAVKKFNFPEETVKQLLIDFPTNMIN---------TYKDESTAGDKVVEVKKEM--EKFISIMDKKGDKVTKAAKEKMIKAKKERLARTIERPQPSQIRRWLREQCDSLIIATLDDPLDALTHLIPHLAVGRPFVVYSEFIQPLLPCFEFVKDEGLAVRVRLMDAFYREHQMVPGRTHPKMDMSSLGGFILTGFKV 2236 V+ H++ + + V G H I +D R+ FV A + FG+ S+ PL+G PY ++FE T + R+ T L D+ S G A D+ DNR ++D N +Q+LT EE++ M+ D SG EII+AL NS T++SKT+FSQQKWLA+K QK+ PR+RLV C AE+VC+ Y +K +++ L +L IL + NV+AG +V+D ++G+V+ +V+ER+G GR++A Y G+ A DAVK NF +L+ F T+ + ++D + + V K++ E+ + +K ++ + +K + +R+ R RP P +R WLR+QCDSLIIAT PL L L+P LA PFV++ EF++PL+ F V+ LA +++L + + RE+Q++PGRTHP M+MSS GG+ILTG KV Sbjct: 8 VSTEHVTEDDTLLV-KEGEHVILLGADDRRYFVEAKRGTN--QRFGKLNCSVIPLIGQPYGSIFELTKKGMSRLFDTDSLTQADEGSALLSPG--AADS-CDNRSLVDTNTSQKLTHEEIEAMKLDPKVSGKEIIQALVHNSDTWESKTQFSQQKWLARKQQKHTPRVRLVLCEAESVCDTYYQKNRERVSNLRSDSLAQILAYGNVFAGGNVLVFDTVMGLVVSSVVERLGGHGRLLAAYAGKQAAFDAVKHMNFTSRQ-SSVLVPFHTSELAKVRGDAAMAAFEDVDDSPEAVAARAKKLIEERPAFVTEKLASLTEESERAAYLKRRADRIKRQTARPSPGTVRNWLRQQCDSLIIATEFHPLTVLLELLPVLAFSAPFVIFCEFLEPLVQAFREVRKRNLACKLQLSNTWTREYQVLPGRTHPSMNMSSCGGYILTGIKV 444
BLAST of mRNA_C-australica_Contig_987.1.4 vs. uniprot
Match: A0A2D4BY31_PYTIN (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BY31_PYTIN) HSP 1 Score: 262 bits (669), Expect = 4.620e-75 Identity = 154/418 (36.84%), Postives = 246/418 (58.85%), Query Frame = 2 Query: 992 GHHCIAKNSDGRKTFVVADGSCQLLKSFGRTKISMGPLVGAPYEAVFEFTGGKLKRVEGTLMLEDGDDKSFGEWKGFNALDTERDNRHVIDDNRAQQLTPEEVKKMQDAGTSGTEIIKALAENSATFQSKTEFSQQKWLAKKSQKYCPRMRLVKCTAETVCEAYQEKKTRQMAGLLGSTLGLILLHSNVYAGCKAMVYDGILGVVLGAVMERMGLQGRVMAPYPGQTLAADAVKKFNFPEETVKQLLIDFPTNMINTYK---DESTAGDKVVEVKKEMEKFISIMDKKGDKVTKAAKEKMIKAKKERLARTIERPQPSQIRRWLREQCDSLIIATLDDPLDALTHLIPHLAVGRPFVVYSEFIQPLLPCFEFVKDEGLAVRVRLMDAFYREHQMVPGRTHPKMDMSSLGGFILTGFKV 2236 G I + SDGR F +C + G+ + P++GA Y ++FE KL V G L D E F DT DNR+ D N AQ+L+ ++ M+++G SG EII+ L ENS T+ +KTEFS+QK+L KK QKY PR+R +KCTA+++C Y+ K ++ + +LG IL+++N++A + +V D +G+V GA+ ER GR++A Y GQ LAAD +++FNF + T++ + FP N + + ++ ++VV+ + E+ + + ++ + T+ +EK K R A ++R + +R W+R Q DSL+IA+ DP L L+P+L RPFVVY E+++PL F ++ + V+L + + REHQ++PGRTHP+M M++ G++LTG KV Sbjct: 38 GDTVICETSDGRIFFQEVKANCTI--RVGKKLTPLKPVIGAXYGSIFEEQNKKLVAVSGGLFP----DPVAPETGEFEVPDT--DNRNYTDTNSAQKLSVHDITGMRESGASGREIIQKLVENSETWDAKTEFSKQKYLKKKQQKYMPRVRFLKCTADSLCRTYRAKNPSKICNIREDSLGQILMYANIHAEAQVLVVDTCMGLVTGAIAERQAGLGRIIAGYEGQQLAADILRRFNFDKSTMESIHT-FPLNSVQYLEMKEEDIPESEQVVKDRLSEEEKLRLEAERVAEYTEEEQEKYYIKKARRAAEKMQRQPATTVREWIRNQSDSLVIASHYDPEPVLLALLPYLKCSRPFVVYXEYMEPLTRLFGKLQQMDSVIDVQLSETWTREHQILPGRTHPEMKMNAFSGYLLTGTKV 446
BLAST of mRNA_C-australica_Contig_987.1.4 vs. uniprot
Match: D8LS75_ECTSI (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS75_ECTSI) HSP 1 Score: 256 bits (655), Expect = 1.750e-73 Identity = 161/443 (36.34%), Postives = 245/443 (55.30%), Query Frame = 2 Query: 953 HLSRAEAMEVCLR-GHHCIAKNSDGRKTFVVADGSCQLLKSFGRTKISMGPLVGAPYEAVFEFTGGKLKRVEGTLMLEDGDDKSFGEWKGFNALDTE---RDNRHVIDDNRAQQLTPEEVKKMQDAGTSGTEIIKALAENSATFQSKTEFSQQKWLAKKSQKYCPRMRLVKCTAETVCEAYQEKKTRQMAGLLGSTLGLILLHSNVYAGCKAMVYDGILGVVLGAVMERMGLQGRVMAPYPGQTLAADAVKKFNFPEETVKQLLIDFPTNMINTYK-----------DESTAGDKVVEVKKEMEKFISIMDKKGDKVTKAAKEKMIKAKKERLARTIERPQPSQIRRWLREQCDSLIIATLDDPLDALTHLIPHLAVGRPFVVYSEFIQPLLPCFEFVKDEGLAVRVRLMDAFYREHQMVPGRTHPKMDMSSLGGFILTGFKV 2236 H+++ E +E + G + +SDGR FV + ++ + G+T M L+ APY AVFE G +L RV+G L+ + + E AL ++ +DNR D N AQ+LT E++ KM++ G G II+AL +NS T+ +KT++SQ KWL +K QKY PR+R+V+ T T+C+AY K +++ L L L+L H+NV+AGC+A+V D +GVV A++ERMG QGR+ A Y + DAV+KF+ E+ + + L+ T+ + D+ GD E ++ + ++ ++MD G V + + I+ K R+ R RP P Q+R WLR+ CD L+IA DP+ A+ ++PHL RPF +YSEFI+ L PGRTHP +MSS GG++LTG K+ Sbjct: 18 HVAKMERIEGQVNDGDTILVDHSDGRTFFVKVESGKRV--NIGKTSCKMSYLLNAPYGAVFELDGNRLVRVDGELVEAEEEPPGVVEEVTAAALASDVRPQDNRGFTDTNTAQKLTEEDIHKMKNEGKGGRAIIQALMDNSDTWGNKTQYSQAKWLKRKQQKYRPRVRVVRVTGRTMCDAYFAKNREKVSNLRSDALALVLTHANVFAGCQALVLDTCMGVVTAAMLERMGCQGRIFALYAQSQPSMDAVRKFDHAEKNLLKCLLPLHTSELGRLSIPESEREADPVDDGGPGDSRTE-EEALAEYRTVMDDHG--VPEKDRPARIERKLARMRRNKHRPAPRQVRDWLRQGCDCLVIACKFDPIAAVDAMLPHLTPSRPFAIYSEFIEVL-----------------------------PGRTHPLNNMSSCGGYVLTGIKI 426
BLAST of mRNA_C-australica_Contig_987.1.4 vs. uniprot
Match: A0A3M6VJP5_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJP5_9STRA) HSP 1 Score: 254 bits (649), Expect = 2.010e-72 Identity = 152/428 (35.51%), Postives = 250/428 (58.41%), Query Frame = 2 Query: 980 VCLRGHHCIAKNSDGRKTF--VVADGSCQLLKSFGRTKISMGPLVGAPYEAVFEFTGGKLKRVEGTLML-----EDGDDKSFGEWKGFNALDTERDNRHVIDDNRAQQLTPEEVKKMQDAGTSGTEIIKALAENSATFQSKTEFSQQKWLAKKSQKYCPRMRLVKCTAETVCEAYQEKKTRQMAGLLGSTLGLILLHSNVYAGCKAMVYDGILGVVLGAVMERMGLQGRVMAPYPGQTLAADAVKKFNFPEETVKQL-LIDFP-TNMINTYKDESTAGDKVVEVKKEMEKFISIMDKKGDKVTKAAKEKMIKAKKERLARTIERPQPSQIRRWLREQCDSLIIATLDDPLDALTHLIPHLAVGRPFVVYSEFIQPLLPCFEFVKDEGLAVRVRLMDAFYREHQMVPGRTHPKMDMSSLGGFILTGFKV 2236 V G I + SDGR F V + S ++ G+ ++ P++G+ Y A+FE KL +V G L E G+D + DNRH D N AQ L ++ +++++G SG EII+ L ENS+T+++KTEFS+QK+L KK QKY PR+R ++CTAE++C Y+ K ++ L +LG IL++ N++AG + +V D +G+V GAV ER G GR++ P+ GQ AAD +++FNF + T++ + + F ++ ++E K+ +E+ + ++ T +++ + K R I R +PS +R+W+RE+ DSL+IA DP + L L+P+L +PFVVYSEF++PL F ++ + ++L + + RE+Q++PGRTHP+M+MS+ G++L G K+ Sbjct: 19 VIYEGDTVICQTSDGRMFFQAVTKNESIRV----GKKVANLKPVIGSFYGAIFEEQNKKLVKVTGGLFPDPVAPETGED-----------FVPDGDNRHYADTNSAQTLKQADIGELRESGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNPAKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVAGAVAERQGGSGRIICPFDGQQPAADILRRFNFDKRTLESIHYVPFKQVRLLELKEEEVVESPKIARDGLTLEERERLAAERAKNFTPEQQKRYAEKKARREETKIFRQKPSTVRQWIREKSDSLVIAANFDPEEVLMALLPYLGRSKPFVVYSEFLEPLTRTFARLQKMEAIIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLWGIKI 431
BLAST of mRNA_C-australica_Contig_987.1.4 vs. uniprot
Match: H3GKX8_PHYRM (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GKX8_PHYRM) HSP 1 Score: 251 bits (641), Expect = 1.010e-71 Identity = 145/389 (37.28%), Postives = 232/389 (59.64%), Query Frame = 2 Query: 1076 GRTKISMGPLVGAPYEAVFEFTGGKLKRVEGTLMLEDGDDKSFGEWKGFNALDTERDNRHVIDDNRAQQLTPEEVKKMQDAGTSGTEIIKALAENSATFQSKTEFSQQKWLAKKSQKYCPRMRLVKCTAETVCEAYQEKKTRQMAGLLGSTLGLILLHSNVYAGCKAMVYDGILGVVLGAVMERMGLQGRVMAPYPGQTLAADAVKKFNFPEETVKQL-LIDFP-TNMINTYKDESTAGDKVVEVKKEMEKFISIMDKKGDKVTKAAKEKMIKAKKERLARTIERPQPSQIRRWLREQCDSLIIATLDDPLDALTHLIPHLAVGRPFVVYSEFIQPLLPCFEFVKDEGLAVRVRLMDAFYREHQMVPGRTHPKMDMSSLGGFILTGFKV 2236 G+ S+ P++G+ Y A+FE KL +V G L D + +GF + DNRH D N AQ L ++ ++++ G SG EII+ L ENS+T+++KTEFS+QK+L KK QKY PR+R ++CTAE++C Y+ K ++ L +LG IL++ N++AG +V D +G+V GA+ ER G GR++ PY GQ AAD +++FNF + TV+ + I F ++ +++ KV E+ + +++ T K R + R PS IR+W+RE+ DSL+IA DP + L ++P+LA +PFVVYSEF++PL F ++ + ++L + + RE+Q++PGRTHP+M+MS+ G++L+G K+ Sbjct: 15 GKKVASLKPVIGSFYGAIFEEQNKKLVKVTGGLFP---DPVAPETGEGFVP---DGDNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNPAKICNLREDSLGQILVYGNIFAGGHVLVVDTCMGLVAGAIAERQGGSGRIICPYEGQQPAADILRRFNFDKRTVESIHYIPFKQVRLLELNEEDVVEPQKVARDGLTPEERERLAEERAKTFTXXXXXXXXXXKARRDGTKVNRQSPSTIRQWMREKSDSLVIAANYDPEEVLLAMLPYLARSKPFVVYSEFLEPLTRTFATLQKMEAVIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKI 397
BLAST of mRNA_C-australica_Contig_987.1.4 vs. uniprot
Match: A0A225VLQ1_9STRA (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VLQ1_9STRA) HSP 1 Score: 251 bits (640), Expect = 3.430e-71 Identity = 152/423 (35.93%), Postives = 246/423 (58.16%), Query Frame = 2 Query: 980 VCLRGHHCIAKNSDGRKTF--VVADGSCQLLKSFGRTKISMGPLVGAPYEAVFEFTGGKLKRVEGTLMLEDGDDKSFGEWKGFNALDTERDNRHVIDDNRAQQLTPEEVKKMQDAGTSGTEIIKALAENSATFQSKTEFSQQKWLAKKSQKYCPRMRLVKCTAETVCEAYQEKKTRQMAGLLGSTLGLILLHSNVYAGCKAMVYDGILGVVLGAVMERMGLQGRVMAPYPGQTLAADAVKKFNFPEETVKQL-LIDFP-TNMINTYKDESTAGDKVVEVKKEMEKFISIMDKKGDKVTKAAKEKMIKAKKERLARTIERPQPSQIRRWLREQCDSLIIATLDDPLDALTHLIPHLAVGRPFVVYSEFIQPLLPCFEFVKDEGLAVRVRLMDAFYREHQMVPGRTHPKMDMSSLGGFILTGFKV 2236 V G I + SDGR F V D S ++ G+ ++ P++G+ Y A+FE KL +V G L D GE + + DNRH D N AQ L ++ ++++ G SG EII+ L ENS+T+++KTEFS+QK+L KK QKY PR+R ++CTAE++C Y+ K ++ L +LG IL++ N++AG + +V D +G+V G++ ER G G ++ PY GQ AAD +++FNF ++T++ + + F M+ +++ KV E+ + ++ T + + + K R I R +PS IR+W RE+ DSL+IA DP + L L+P L +PFV+YSEF++PL F ++ + ++L + + RE+Q++PGRTHP+M+MS+ G++L+G K+ Sbjct: 18 VIYEGDTVICQTSDGRMFFQAVTKDESIRV----GKKVANLKPVIGSFYGAIFEEQNKKLVKVTGGLFP-DPVAPETGE-----SFVPDGDNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNPAKICNLREDSLGQILVYGNIFAGGRVLVVDTCMGLVAGSIAERQGGSGCIICPYEGQQPAADILRRFNFDKKTLESIHYMPFKQVRMLEMEEEDVVEAPKVARDGLTPEERELLAAERAKNFTPEQQRRYAEKKARREQTKIYRQKPSTIRQWAREKSDSLVIAATYDPEEILMALLPFLGRSKPFVIYSEFLEPLTRTFATLQKMEAIIDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKI 430
BLAST of mRNA_C-australica_Contig_987.1.4 vs. uniprot
Match: A0A2D4CD60_PYTIN (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CD60_PYTIN) HSP 1 Score: 261 bits (666), Expect = 5.710e-70 Identity = 154/418 (36.84%), Postives = 246/418 (58.85%), Query Frame = 2 Query: 992 GHHCIAKNSDGRKTFVVADGSCQLLKSFGRTKISMGPLVGAPYEAVFEFTGGKLKRVEGTLMLEDGDDKSFGEWKGFNALDTERDNRHVIDDNRAQQLTPEEVKKMQDAGTSGTEIIKALAENSATFQSKTEFSQQKWLAKKSQKYCPRMRLVKCTAETVCEAYQEKKTRQMAGLLGSTLGLILLHSNVYAGCKAMVYDGILGVVLGAVMERMGLQGRVMAPYPGQTLAADAVKKFNFPEETVKQLLIDFPTNMINTYK---DESTAGDKVVEVKKEMEKFISIMDKKGDKVTKAAKEKMIKAKKERLARTIERPQPSQIRRWLREQCDSLIIATLDDPLDALTHLIPHLAVGRPFVVYSEFIQPLLPCFEFVKDEGLAVRVRLMDAFYREHQMVPGRTHPKMDMSSLGGFILTGFKV 2236 G I + SDGR F +C + G+ + P++GA Y ++FE KL V G L D E F DT DNR+ D N AQ+L+ ++ M+++G SG EII+ L ENS T+ +KTEFS+QK+L KK QKY PR+R +KCTA+++C Y+ K ++ + +LG IL+++N++A + +V D +G+V GA+ ER GR++A Y GQ LAAD +++FNF + T++ + FP N + + ++ ++VV+ + E+ + + ++ + T+ +EK K R A ++R + +R W+R Q DSL+IA+ DP L L+P+L RPFVVY E+++PL F ++ + V+L + + REHQ++PGRTHP+M M++ G++LTG KV Sbjct: 72 GDTVICETSDGRIFFQEVKANCTI--RVGKKLTPLKPVIGAFYGSIFEEQNKKLVAVSGGLFP----DPVAPETGEFEVPDT--DNRNYTDTNSAQKLSVHDITGMRESGASGREIIQKLVENSETWDAKTEFSKQKYLKKKQQKYMPRVRFLKCTADSLCRTYRAKNPSKICNIREDSLGQILMYANIHAEAQVLVVDTCMGLVTGAIAERQAGLGRIIAGYEGQQLAADILRRFNFDKSTMESIHT-FPLNSVQYLEMKEEDIPESEQVVKDRLSEEEKLRLEAERVAEYTEEEQEKYYIKKARRAAEKMQRQPATTVREWIRNQSDSLVIASHYDPEPVLLALLPYLKCSRPFVVYCEYMEPLTRLFGKLQQMDSVIDVQLSETWTREHQILPGRTHPEMKMNAFSGYLLTGTKV 480
BLAST of mRNA_C-australica_Contig_987.1.4 vs. uniprot
Match: A0A067C628_SAPPC (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C628_SAPPC) HSP 1 Score: 240 bits (612), Expect = 2.020e-67 Identity = 156/444 (35.14%), Postives = 248/444 (55.86%), Query Frame = 2 Query: 977 EVCLRGHHCIAKNSDGRKTFVVADGSCQLLKSFGRTKISMGPLVGAPYEAVFEFTGGKLKRVEGTLMLEDGDDKSFGEWKGFNALDTERDNRHVIDDNRAQQLTPEEVKKMQDAGTSGTEIIKALAENSATFQSKTEFSQQKWLAKKSQKYCPRMRLVKCTAETVCEAYQEKKTRQMAGLLGSTLGLILLHSNVYAGCKAMVYDGILGVVLGAVMERMGLQGRVMAPYPGQTLAADAVKKFNFPEETVKQLLIDFPTNMINTY-KDES-------------TAGDKVVEVKKEMEKFISIMDKKGDKVTKAAKEKMIKAKKERLARTIERPQPSQIRRWLREQCDSLIIATLDDPLDALTHLIPHLAVGRPFVVYSEFIQPLLPCFEFVKDEGLAVRVRLMDAFYREHQMVPGRTHPKMDMSSLGGFILTGFKVE---PPGDKA 2257 EV G + SD R F + S ++ G+ +++ +G PY +FE + L V G L D E F DNRH D N +Q+L+ ++ +++ +G +G E+I L ENS T+ +KTEFS+QK+L KK QKY PR+++V+CTA ++ E Y ++ ++ L TLG +L + NVYAG + +V D +G+ GA+ ERM GR++A + GQ +AAD +++FNF E V ++ FP + KDE+ + +++ ++E+ + +++ + A KE IKA++ + RT P+++R LR DSLIIA+ DPL L L+P L + +PFVVYSE+++PL F+ ++ V ++L D + RE+Q++PGRTHP+M MS+ G+IL+G KVE PP A Sbjct: 3 EVIRDGDTVVCYTSDDRVFF--QEVSPKMTLRIGKATVTLKSAIGHPYGTIFEESEKALVPVTGGLFP----DPVAPEVGDFQV--PTNDNRHYTDTNDSQKLSNVQIAELRASGVNGPELIAKLVENSDTWDTKTEFSKQKYLKKKQQKYMPRIQMVRCTAMSLAEVYHARQPFKILNLRADTLGQLLQYGNVYAGAQVLVVDTCMGLATGAIAERMLGHGRILAGFEGQQMAADTLRRFNF-EPAVHDSIVPFPLAYVGLLTKDEADLAPPPKSQAEMDSTNEEIEARQREVAERVALYSPEEQAKYLAKKEARIKARQTKTRRT-----PAEVRALLRSPSDSLIIASHYDPLSMLQALLPLLGLSKPFVVYSEYLEPLTTAFDALQRMDSIVNLQLNDTWTREYQVLPGRTHPEMTMSAGSGYILSGIKVESSPPPASHA 432
BLAST of mRNA_C-australica_Contig_987.1.4 vs. uniprot
Match: A0A0P1AWZ4_PLAHL (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AWZ4_PLAHL) HSP 1 Score: 240 bits (613), Expect = 2.790e-67 Identity = 152/427 (35.60%), Postives = 241/427 (56.44%), Query Frame = 2 Query: 980 VCLRGHHCIAKNSDGRKTF--VVADGSCQLLKSFGRTKISMGPLVGAPYEAVFEFTGGKLKRVEGTLMLEDGDDKSFGEWKGFNALDTERDNRHVIDDNRAQQLTPEEVKKMQDAGTSGTEIIKALAENSATFQSKTEFSQQKWLAKKSQKYCPRMRLVKCTAETVCEAYQEKKTRQMAGLLGSTLGLILLHSNVYAGCKAMVYDGILGVVLGAVMERMGLQGRVMAPYPGQTLAADAVKKFNFPEETVKQLLIDFPTNMINTYKDESTAGDKVVEVKK------EMEKFISIMDKKGDKVTKAAKEKMIKAKKERLARTIERPQPSQIRRWLREQCDSLIIATLDDPLDALTHLIPHLAVGRPFVVYSEFIQPLLPCFEFVKDEGLAVRVRLMDAFYREHQMVPGRTHPKMDMSSLGGFILTGFKV 2236 + G I + SDGR F + + S ++ G+ S+ P+VG+ Y A+FE KL +V G L D GE L+ + DNRH D N AQ L ++ +++D G SG EII+ L ENS+T+++KT+FS+QK+L KK QKY PR+R ++CTAE++C Y+ K ++ + +LG IL+++N++AG + +V D +G+V GA+ ER G ++ PY GQ AAD +++FNF ++T++ + P N + E D VVE+K+ E + K R + R +PS IR W+R++ DSL+IA DP L L+P+L +PFV+YSEF++PL F ++ + ++L + + RE+Q++PGRTHP+M MS+ G++L+G K+ Sbjct: 22 IIYEGDTVICQTSDGRMFFQAITKNESIRV----GKKVASLKPVVGSFYGAIFEEQNKKLVKVTGGLFP-DPVAPETGE-----GLNPDEDNRHFADTNSAQMLKQTDIGELRDKGASGKEIIQKLVENSSTWETKTDFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNPMKICNMREDSLGQILVYANIFAGGQVLVVDTCMGLVAGAIAERQRGTGCIICPYEGQQPAADILRRFNFDKQTLESIHY-MPFNQVRML--EMNEED-VVEIKQVARDGLSQEXXXXXXXXXXXXXXXXXXXXXAEKKALREQTKLFRQKPSTIREWVRQKSDSLVIAANYDPEKVLMALLPYLGRSKPFVIYSEFLEPLTRTFATLQKLEAIIDLQLNETWTRENQVLPGRTHPEMSMSACSGYLLSGIKI 434
BLAST of mRNA_C-australica_Contig_987.1.4 vs. uniprot
Match: A0A0W8CAK1_PHYNI (tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 n=14 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CAK1_PHYNI) HSP 1 Score: 240 bits (612), Expect = 3.150e-67 Identity = 154/428 (35.98%), Postives = 244/428 (57.01%), Query Frame = 2 Query: 980 VCLRGHHCIAKNSDGRKTF--VVADGSCQLLKSFGRTKISMGPLVGAPYEAVFEFTGGKLKRVEGTLML-----EDGDDKSFGEWKGFNALDTERDNRHVIDDNRAQQLTPEEVKKMQDAGTSGTEIIKALAENSATFQSKTEFSQQKWLAKKSQKYCPRMRLVKCTAETVCEAYQEKKTRQMAGLLGSTLGLILLHSNVYAGCKAMVYDGILGVVLGAVMERMGLQGRVMAPYPGQTLAADAVKKFNFPEETVKQL-LIDFP-TNMINTYKDESTAGDKVVEVKKEMEKFISIMDKKGDKVTKAAKEKMIKAKKERLARTIERPQPSQIRRWLREQCDSLIIATLDDPLDALTHLIPHLAVGRPFVVYSEFIQPLLPCFEFVKDEGLAVRVRLMDAFYREHQMVPGRTHPKMDMSSLGGFILTGFKV 2236 V G I + SDGR F V D S ++ G+ ++ P++G+ Y A+FE KL +V G L E GD GF + DNRH D N AQ L ++ ++++ G SG EII+ L ENS+T+++KTEFS+QK+L KK QKY PR+R ++CTAE++C Y+ K ++ L +LG IL++ N++AG + +V D +G+V GA+ ER G GR++ PY GQ AAD +++FNF + T++ + + F ++ +++ KV E+ + ++ T + + K R + R +PS IR W RE+ DSL+IA DP + L L+P+L +PFVVYSEF++ K E + + ++L + + RE+Q++PGRTHP+M+MS+ G++L+G K+ Sbjct: 25 VIYEGDTVICQTSDGRMFFQAVAKDESIRV----GKKVANLKPVIGSFYGAIFEEQNKKLVKVTGGLFPDPVAPETGD--------GFVP---DGDNRHYADTNSAQTLKQTDIGELREKGASGKEIIQKLVENSSTWETKTEFSKQKYLKKKQQKYMPRVRFLRCTAESLCRTYRLKNPAKICNLREDSLGQILVYGNIFAGGQVLVVDTCMGLVTGAIAERQGGSGRIICPYEGQQPAADILRRFNFDKRTLESIHYMPFKQVRLLEMEEEDVVEPAKVARDGLTPEEREQLAAERAKNFTPXXXXRYAEKKARREQTKLFRQKPSTIREWAREKSDSLVIAANYDPEEVLMALLPYLGRSKPFVVYSEFLE---------KMEAI-IDLQLNETWTRENQVLPGRTHPEMNMSACSGYLLSGIKI 427 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_987.1.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_987.1.4 >prot_C-australica_Contig_987.1.4 ID=prot_C-australica_Contig_987.1.4|Name=mRNA_C-australica_Contig_987.1.4|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=452bp MEVCLRGHHCIAKNSDGRKTFVVADGSCQLLKSFGRTKISMGPLVGAPYEback to top mRNA from alignment at C-australica_Contig_987:6625..10732- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_987.1.4 ID=mRNA_C-australica_Contig_987.1.4|Name=mRNA_C-australica_Contig_987.1.4|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4108bp|location=Sequence derived from alignment at C-australica_Contig_987:6625..10732- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_987:6625..10732- >mRNA_C-australica_Contig_987.1.4 ID=mRNA_C-australica_Contig_987.1.4|Name=mRNA_C-australica_Contig_987.1.4|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1356bp|location=Sequence derived from alignment at C-australica_Contig_987:6625..10732- (Chrysoparadoxa australica CS_1217)back to top |