mRNA_C-australica_Contig_986.4.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_986.4.1 vs. uniprot
Match: D7FKG7_ECTSI (Inorganic diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKG7_ECTSI) HSP 1 Score: 326 bits (836), Expect = 3.420e-109 Identity = 147/184 (79.89%), Postives = 160/184 (86.96%), Query Frame = 2 Query: 236 FA*MEIATKEASNPIAQDIKKGKLRAYGGPIFWNYGCLPQTWEDPSVKHPELGVLGDGDPVDVVEIGSRKLGSGEVVAVKPLGCLAMIDDGELDWKVIAVDVNDPLAKDLNDIGDVENKCPGVISGIREWFRWYKTPDDKPLNGFGFDERALSKKETIEVIEECNVHWKNLVSGNTEQGKMWTK 787 A MEIATKE +NPIAQD KKGKLR Y GPIFWNYG +PQTWEDP+VKHPELGVLGDGDPVDVVEIGS KL SG V A+KPLGCLAMIDDGELDWKVI +DV+DPLAKDLNDI DVE PG +SGIREWFRWYKTPDDKPLN FGFDE+AL+K+ET++VI+ECN HWK LV G TE GKMW K Sbjct: 105 LAKMEIATKEPNNPIAQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSAKLASGTVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGYVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK 288
BLAST of mRNA_C-australica_Contig_986.4.1 vs. uniprot
Match: A0A6H5KSZ1_9PHAE (Inorganic diphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ1_9PHAE) HSP 1 Score: 325 bits (833), Expect = 2.830e-107 Identity = 146/181 (80.66%), Postives = 159/181 (87.85%), Query Frame = 2 Query: 245 MEIATKEASNPIAQDIKKGKLRAYGGPIFWNYGCLPQTWEDPSVKHPELGVLGDGDPVDVVEIGSRKLGSGEVVAVKPLGCLAMIDDGELDWKVIAVDVNDPLAKDLNDIGDVENKCPGVISGIREWFRWYKTPDDKPLNGFGFDERALSKKETIEVIEECNVHWKNLVSGNTEQGKMWTK 787 MEIATKE +NPIAQD KKGKLR Y GPIFWNYG +PQTWEDP+VKHPELGVLGDGDPVDVVEIGS KL SG V A+KPLGCLAMIDDGELDWKVI +DV+DPLAKDLNDI DVE PG +SGIREWFRWYKTPDDKPLN FGFDE+AL+K+ET++VI+ECN HWK LV G TE GKMW K Sbjct: 210 MEIATKEPNNPIAQDTKKGKLRFYHGPIFWNYGYIPQTWEDPTVKHPELGVLGDGDPVDVVEIGSAKLASGAVKAIKPLGCLAMIDDGELDWKVIGIDVDDPLAKDLNDIADVEKLLPGHVSGIREWFRWYKTPDDKPLNAFGFDEKALNKEETMKVIDECNGHWKALVDGKTEAGKMWIK 390
BLAST of mRNA_C-australica_Contig_986.4.1 vs. uniprot
Match: H6WB91_VAULI (Inorganic diphosphatase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB91_VAULI) HSP 1 Score: 305 bits (781), Expect = 6.450e-101 Identity = 136/180 (75.56%), Postives = 152/180 (84.44%), Query Frame = 2 Query: 245 MEIATKEASNPIAQDIKKGKLRAYGGPIFWNYGCLPQTWEDPSVKHPELGVLGDGDPVDVVEIGSRKLGSGEVVAVKPLGCLAMIDDGELDWKVIAVDVNDPLAKDLNDIGDVENKCPGVISGIREWFRWYKTPDDKPLNGFGFDERALSKKETIEVIEECNVHWKNLVSGNTEQGKMWT 784 MEIATKE NPIAQDIKKG LR Y GPIFWNYG LPQTWEDPSV+HPEL V+GDGDPVDVVEIGS+K GE+ +KPLGCLAMIDDGELDWKVIA+ DPL +LNDI DVE CPGV+SGIREWFRWYKTPDDKP+N FGF RAL+ KET VI ECN HWK+L++GN+++GKMWT Sbjct: 103 MEIATKEELNPIAQDIKKGNLRFYHGPIFWNYGYLPQTWEDPSVEHPELSVMGDGDPVDVVEIGSKKRSEGELCQIKPLGCLAMIDDGELDWKVIAIAKGDPLFDELNDIEDVEANCPGVVSGIREWFRWYKTPDDKPVNEFGFGGRALNAKETKLVISECNEHWKSLIAGNSDKGKMWT 282
BLAST of mRNA_C-australica_Contig_986.4.1 vs. uniprot
Match: A0A836CKW0_9STRA (Inorganic diphosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKW0_9STRA) HSP 1 Score: 305 bits (780), Expect = 9.150e-101 Identity = 137/180 (76.11%), Postives = 151/180 (83.89%), Query Frame = 2 Query: 245 MEIATKEASNPIAQDIKKGKLRAYGGPIFWNYGCLPQTWEDPSVKHPELGVLGDGDPVDVVEIGSRKLGSGEVVAVKPLGCLAMIDDGELDWKVIAVDVNDPLAKDLNDIGDVENKCPGVISGIREWFRWYKTPDDKPLNGFGFDERALSKKETIEVIEECNVHWKNLVSGNTEQGKMWT 784 MEIATKE NPIAQDIKKG LR Y GPIFWNYG LPQTWEDP+VKHPELGV+GDGDPVDVVEIGS KL G + V+ LGCLAMIDDGELDWKVIA+ +DPLA L+DI DVE CPGV+SGIREWFRWYKTPDDKP+N FGF ERAL KET ++I ECN HWK LV+G TE+GK+WT Sbjct: 103 MEIATKEPHNPIAQDIKKGALRFYHGPIFWNYGYLPQTWEDPNVKHPELGVMGDGDPVDVVEIGSTKLPQGSLKQVRALGCLAMIDDGELDWKVIAIAKDDPLAAKLHDIKDVEEHCPGVVSGIREWFRWYKTPDDKPVNEFGFGERALDAKETADIISECNGHWKALVAGKTEKGKLWT 282
BLAST of mRNA_C-australica_Contig_986.4.1 vs. uniprot
Match: A0A7S1UHB8_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHB8_9STRA) HSP 1 Score: 287 bits (734), Expect = 4.770e-94 Identity = 124/179 (69.27%), Postives = 147/179 (82.12%), Query Frame = 2 Query: 245 MEIATKEASNPIAQDIKKGKLRAYGGPIFWNYGCLPQTWEDPSVKHPELGVLGDGDPVDVVEIGSRKLGSGEVVAVKPLGCLAMIDDGELDWKVIAVDVNDPLAKDLNDIGDVENKCPGVISGIREWFRWYKTPDDKPLNGFGFDERALSKKETIEVIEECNVHWKNLVSGNTEQGKMW 781 ME+ATKE +NPIAQD+KKGKLR Y GPIFWNYGCLPQTWEDP+++HPEL V GD DP+DVVE+GS L G V AVKP+G LAMIDDGELDWK+IA++ DP+A +++D+ D+E K PGV+SGIREWFRWYKTPDDKPLNGFGFDE+ L K + I+VIEE N WK L G E GK+W Sbjct: 85 MEVATKEENNPIAQDMKKGKLRDYHGPIFWNYGCLPQTWEDPNIEHPELKVSGDDDPLDVVEVGSASLEMGSVTAVKPIGVLAMIDDGELDWKLIAINKADPMAAEIDDVSDLEAKMPGVVSGIREWFRWYKTPDDKPLNGFGFDEKCLPKADAIKVIEETNEQWKALKEGKVEAGKLW 263
BLAST of mRNA_C-australica_Contig_986.4.1 vs. uniprot
Match: A0A7S1UHT4_9STRA (Inorganic diphosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHT4_9STRA) HSP 1 Score: 287 bits (734), Expect = 2.100e-93 Identity = 124/179 (69.27%), Postives = 147/179 (82.12%), Query Frame = 2 Query: 245 MEIATKEASNPIAQDIKKGKLRAYGGPIFWNYGCLPQTWEDPSVKHPELGVLGDGDPVDVVEIGSRKLGSGEVVAVKPLGCLAMIDDGELDWKVIAVDVNDPLAKDLNDIGDVENKCPGVISGIREWFRWYKTPDDKPLNGFGFDERALSKKETIEVIEECNVHWKNLVSGNTEQGKMW 781 ME+ATKE +NPIAQD+KKGKLR Y GPIFWNYGCLPQTWEDP+++HPEL V GD DP+DVVE+GS L G V AVKP+G LAMIDDGELDWK+IA++ DP+A +++D+ D+E K PGV+SGIREWFRWYKTPDDKPLNGFGFDE+ L K + I+VIEE N WK L G E GK+W Sbjct: 130 MEVATKEENNPIAQDMKKGKLRDYHGPIFWNYGCLPQTWEDPNIEHPELKVSGDDDPLDVVEVGSASLEMGSVTAVKPIGVLAMIDDGELDWKLIAINKADPMAAEIDDVSDLEAKMPGVVSGIREWFRWYKTPDDKPLNGFGFDEKCLPKADAIKVIEETNEQWKALKEGKVEAGKLW 308
BLAST of mRNA_C-australica_Contig_986.4.1 vs. uniprot
Match: A0A7S2WW41_9STRA (Inorganic diphosphatase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW41_9STRA) HSP 1 Score: 284 bits (727), Expect = 4.500e-93 Identity = 126/180 (70.00%), Postives = 143/180 (79.44%), Query Frame = 2 Query: 245 MEIATKEASNPIAQDIKKGKLRAYGGPIFWNYGCLPQTWEDPSVKHPELGVLGDGDPVDVVEIGSRKLGSGEVVAVKPLGCLAMIDDGELDWKVIAVDVNDPLAKDLNDIGDVENKCPGVISGIREWFRWYKTPDDKPLNGFGFDERALSKKETIEVIEECNVHWKNLVSGNTEQGKMWT 784 MEI+TKE SNPIAQD+KKGKLR Y GPIFWNYGCLPQTWE+P+ +HP+L GD DP+DVVEIGS L G + VKPLG LAMIDDGELDWKVIA+ +D +A DLND+ DVE K PG ISGIREWFRWYKTPDDKPLN FGFDE LSK E ++VIEE + WK L G+ E GK+WT Sbjct: 78 MEISTKEESNPIAQDVKKGKLRDYHGPIFWNYGCLPQTWENPNEEHPKLKCFGDDDPIDVVEIGSSALSMGSITPVKPLGVLAMIDDGELDWKVIAISTSDEMAGDLNDVADVEAKMPGTISGIREWFRWYKTPDDKPLNSFGFDEECLSKDEAVKVIEETHEAWKGLRDGSIEAGKLWT 257
BLAST of mRNA_C-australica_Contig_986.4.1 vs. uniprot
Match: A0A8J9S6N0_PHATR (Hypothetical protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S6N0_PHATR) HSP 1 Score: 281 bits (720), Expect = 5.000e-93 Identity = 129/179 (72.07%), Postives = 143/179 (79.89%), Query Frame = 2 Query: 245 MEIATKEASNPIAQDIKKGKLRAYGGPIFWNYGCLPQTWEDPSVKHPELGVLGDGDPVDVVEIGSRKLGSGEVVAVKPLGCLAMIDDGELDWKVIAVDVNDPLAKDLNDIGDVENKCPGVISGIREWFRWYKTPDDKPLNGFGFDERALSKKETIEVIEECNVHWKNLVSGNTEQGKMW 781 ME+ATKE NPIAQDIKKGKLR Y GPIFWNYGCLPQTWEDP+VKHPELG GD DP+DVVEIGS LG G V +VKPLG LAMIDDGELDWKV+A+ +DPLA+ NDIGDV V +GIREWFRWYKTPDDKP+N FGFDE+ L K E I+VIEE N WK L +G TE GK+W Sbjct: 12 MEVATKEEFNPIAQDIKKGKLRDYHGPIFWNYGCLPQTWEDPTVKHPELGCFGDDDPIDVVEIGSASLGMGSVKSVKPLGVLAMIDDGELDWKVLAIATDDPLAEKYNDIGDVPES---VQAGIREWFRWYKTPDDKPINEFGFDEKYLDKAEAIKVIEETNDAWKKLKAGETEAGKLW 187
BLAST of mRNA_C-australica_Contig_986.4.1 vs. uniprot
Match: A0A8J2SRR3_9STRA (Inorganic diphosphatase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRR3_9STRA) HSP 1 Score: 286 bits (731), Expect = 1.500e-91 Identity = 129/183 (70.49%), Postives = 143/183 (78.14%), Query Frame = 2 Query: 236 FA*MEIATKEASNPIAQDIKKGKLRAYGGPIFWNYGCLPQTWEDPSVKHPELGVLGDGDPVDVVEIGSRKLGSGEVVAVKPLGCLAMIDDGELDWKVIAVDVNDPLAKDLNDIGDVENKCPGVISGIREWFRWYKTPDDKPLNGFGFDERALSKKETIEVIEECNVHWKNLVSGNTEQGKMWT 784 A ME+ TK SNPI QD KKGKLR Y GPIFWNYGCLPQTWE+P+ KHPELG GD DP+DVVEIGS L +G V VKPLG LAMIDDGELDWKVIAV +DPLA LNDI DVE +CPG +SGIREWFRWYKTPDDKPLN FGFDE AL K +T+EVI E + WK L G+ + GK+WT Sbjct: 229 LAKMEVDTKGESNPIMQDTKKGKLRFYHGPIFWNYGCLPQTWENPNEKHPELGCFGDDDPIDVVEIGSSALEAGSVTPVKPLGVLAMIDDGELDWKVIAVATSDPLASKLNDIDDVEKECPGYVSGIREWFRWYKTPDDKPLNAFGFDEAALPKAKTVEVIAETHAAWKGLRDGSIDAGKLWT 411
BLAST of mRNA_C-australica_Contig_986.4.1 vs. uniprot
Match: A0A7S2F6A2_9STRA (Inorganic diphosphatase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F6A2_9STRA) HSP 1 Score: 281 bits (718), Expect = 2.390e-91 Identity = 124/180 (68.89%), Postives = 142/180 (78.89%), Query Frame = 2 Query: 245 MEIATKEASNPIAQDIKKGKLRAYGGPIFWNYGCLPQTWEDPSVKHPELGVLGDGDPVDVVEIGSRKLGSGEVVAVKPLGCLAMIDDGELDWKVIAVDVNDPLAKDLNDIGDVENKCPGVISGIREWFRWYKTPDDKPLNGFGFDERALSKKETIEVIEECNVHWKNLVSGNTEQGKMWT 784 ME+ TKEASNPIAQDIKKGKLR Y GPIFWNYGCLPQTWE+P+ +HP L GD DP+DVVEIGS L G V VK LG LAMIDDGELDWK++A+ DP+A +LNDIGDVE+K PG +SGIREWFRWYKTPDDKPLN FGFDE LS ++ +EV+ E N WK+L G E GK+WT Sbjct: 103 MEVNTKEASNPIAQDIKKGKLRDYHGPIFWNYGCLPQTWENPNEEHPVLKCFGDDDPLDVVEIGSAALSMGSVTPVKALGVLAMIDDGELDWKIVAISAEDPMAAELNDIGDVESKMPGTLSGIREWFRWYKTPDDKPLNSFGFDEEFLSSEKAMEVVAETNQAWKDLREGKIEAGKLWT 282 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_986.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_986.4.1 >prot_C-australica_Contig_986.4.1 ID=prot_C-australica_Contig_986.4.1|Name=mRNA_C-australica_Contig_986.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=182bp MEIATKEASNPIAQDIKKGKLRAYGGPIFWNYGCLPQTWEDPSVKHPELGback to top mRNA from alignment at C-australica_Contig_986:13174..14953- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_986.4.1 ID=mRNA_C-australica_Contig_986.4.1|Name=mRNA_C-australica_Contig_986.4.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1780bp|location=Sequence derived from alignment at C-australica_Contig_986:13174..14953- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_986:13174..14953- >mRNA_C-australica_Contig_986.4.1 ID=mRNA_C-australica_Contig_986.4.1|Name=mRNA_C-australica_Contig_986.4.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=546bp|location=Sequence derived from alignment at C-australica_Contig_986:13174..14953- (Chrysoparadoxa australica CS_1217)back to top |