mRNA_C-australica_Contig_983.9.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_983.9.1 vs. uniprot
Match: A0A835YV61_9STRA (Bicarbonate transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV61_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 1.220e-22 Identity = 51/76 (67.11%), Postives = 62/76 (81.58%), Query Frame = 2 Query: 2 VRLVNSKEHKMKKGHGYHLDMAALSLLIASSSVLGLPWLVAATVRSLAHVKALAKFEASE--GKEEITGITEQRVS 223 VRLVN++EHK+KKG G HLDMAA++ L+A SVLGLPWLVAATVRSLAHV+ALA++E + G E I +TE RVS Sbjct: 321 VRLVNAREHKLKKGFGLHLDMAAIAALVAGCSVLGLPWLVAATVRSLAHVRALARYERRDDGGGEAIAAMTETRVS 396
BLAST of mRNA_C-australica_Contig_983.9.1 vs. uniprot
Match: A0A6H5JQF4_9PHAE (HCO3_cotransp domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQF4_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 1.300e-19 Identity = 47/76 (61.84%), Postives = 60/76 (78.95%), Query Frame = 2 Query: 2 VRLVNSKEHKMKKGHGYHLDMAALSLLIASSSVLGLPWLVAATVRSLAHVKALAKFEA-SEGK-EEITGITEQRVS 223 VRLVN+K+HK+KKG+G +LDM ++ L A+ SV GLPWLVAATVRSLAHVK+L K++ G+ E I G+ EQRVS Sbjct: 62 VRLVNAKQHKLKKGYGMNLDMGIIAGLTAACSVFGLPWLVAATVRSLAHVKSLTKYDQLGWGRGERIAGVAEQRVS 137
BLAST of mRNA_C-australica_Contig_983.9.1 vs. uniprot
Match: A0A7S0DU45_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DU45_9CRYP) HSP 1 Score: 88.6 bits (218), Expect = 8.500e-19 Identity = 44/74 (59.46%), Postives = 56/74 (75.68%), Query Frame = 2 Query: 2 VRLVNSKEHKMKKGHGYHLDMAALSLLIASSSVLGLPWLVAATVRSLAHVKALAKFEASEGKEEITGITEQRVS 223 VRLVNS +HK+KKGHGY LD+ ++LL SSV+G PWLVAATVRSLAHV+A +E+ G + G+ EQRV+ Sbjct: 357 VRLVNSDKHKLKKGHGYDLDLLIIALLTGGSSVIGFPWLVAATVRSLAHVRANTVYES--GTANVQGVLEQRVT 428
BLAST of mRNA_C-australica_Contig_983.9.1 vs. uniprot
Match: D7FMX9_ECTSI (Boron transporter 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMX9_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 8.790e-19 Identity = 47/76 (61.84%), Postives = 60/76 (78.95%), Query Frame = 2 Query: 2 VRLVNSKEHKMKKGHGYHLDMAALSLLIASSSVLGLPWLVAATVRSLAHVKALAKFEA-SEGK-EEITGITEQRVS 223 VRLVN+K+HK+KKG+G +LDM ++ L A+ SV GLPWLVAATVRSLAHVK+L K++ G+ E I G+ EQRVS Sbjct: 584 VRLVNAKQHKLKKGYGMNLDMGIIAGLTAACSVFGLPWLVAATVRSLAHVKSLTKYDQLGWGRGERIAGVAEQRVS 659
BLAST of mRNA_C-australica_Contig_983.9.1 vs. uniprot
Match: A0A7S4PNM8_GUITH (Hypothetical protein n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4PNM8_GUITH) HSP 1 Score: 85.5 bits (210), Expect = 1.040e-17 Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = 2 Query: 2 VRLVNSKEHKMKKGHGYHLDMAALSLLIASSSVLGLPWLVAATVRSLAHVKALAKFEASEGKEEITGITEQRVS 223 VRLVNS +HK+KKGHGY LD+ ++LL SV+G PWLVAATVRSLAHV+A +++ G + G+ EQRV+ Sbjct: 379 VRLVNSDKHKLKKGHGYDLDLLIIALLTGGCSVIGFPWLVAATVRSLAHVRANTVYQS--GTTNVQGVLEQRVT 450
BLAST of mRNA_C-australica_Contig_983.9.1 vs. uniprot
Match: A0A0G4GX26_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GX26_VITBC) HSP 1 Score: 84.0 bits (206), Expect = 3.640e-17 Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 2 VRLVNSKEHKMKKGHGYHLDMAALSLLIASSSVLGLPWLVAATVRSLAHVKALAKFEASEGKEE---ITGITEQRVS 223 VRLVNS +HK+KK +GY LD+A L++ SSVLGLPWLVAATVRSL HV+++ F+ S+G ++ + G EQRV+ Sbjct: 374 VRLVNSNKHKLKKPNGYDLDLATLTVTTGISSVLGLPWLVAATVRSLNHVRSVMNFDYSKGGDDSSAVVGCDEQRVT 450
BLAST of mRNA_C-australica_Contig_983.9.1 vs. uniprot
Match: T1G3A7_HELRO (Anion exchange protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1G3A7_HELRO) HSP 1 Score: 82.0 bits (201), Expect = 1.760e-16 Identity = 39/75 (52.00%), Postives = 56/75 (74.67%), Query Frame = 2 Query: 8 LVNSKEHKMKKGHGYHLDMAALSLLIASSSVLGLPWLVAATVRSLAHVKAL---AKFEASEGKEEITGITEQRVS 223 ++N KEHK+KKGHGYHLD+ L++LIA S LGLPW VAATVR++ HVK+L ++ + + ++ G+ EQRV+ Sbjct: 692 IINRKEHKLKKGHGYHLDLFVLAILIAICSFLGLPWFVAATVRAITHVKSLIRESEVKIPGERPQMLGVREQRVT 766
BLAST of mRNA_C-australica_Contig_983.9.1 vs. uniprot
Match: A0A4D9DEQ9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DEQ9_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 2.370e-16 Identity = 42/75 (56.00%), Postives = 57/75 (76.00%), Query Frame = 2 Query: 2 VRLVNSKEHKMKKGHGYHLDMAALSLLIASSSVLGLPWLVAATVRSLAHVKALAKFEASE-GKEEITGITEQRVS 223 VRLVNS HK+KKG+G HLDM +S+L +S+ GLPWLVAATVRSL HV+A A+F+++E G+ I + E R++ Sbjct: 398 VRLVNSPSHKIKKGYGLHLDMFVVSILTFINSLFGLPWLVAATVRSLNHVRACARFKSTEDGEVVIESMQENRLT 472
BLAST of mRNA_C-australica_Contig_983.9.1 vs. uniprot
Match: A0A0S3Q293_9ANNE (Anion exchange protein (Fragment) n=1 Tax=Osedax japonicus TaxID=385425 RepID=A0A0S3Q293_9ANNE) HSP 1 Score: 81.6 bits (200), Expect = 2.400e-16 Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 2 Query: 8 LVNSKEHKMKKGHGYHLDMAALSLLIASSSVLGLPWLVAATVRSLAHVKALAK---FEASEGKEEITGITEQRVS 223 +VN KEHK+KKGHGYHLD+ LS L+ S LGLPW VAATVR++ HV++L K +A + ++ G+ EQRV+ Sbjct: 616 IVNRKEHKLKKGHGYHLDLFILSFLVGICSWLGLPWFVAATVRTITHVRSLIKESDLKAPGERPQMLGVREQRVT 690
BLAST of mRNA_C-australica_Contig_983.9.1 vs. uniprot
Match: A0A401UCZ2_9BACT (HCO3-transporter n=1 Tax=Chryseotalea sanaruensis TaxID=2482724 RepID=A0A401UCZ2_9BACT) HSP 1 Score: 81.3 bits (199), Expect = 3.170e-16 Identity = 43/79 (54.43%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 2 VRLVNSKEHKMKKGHGYHLDMAALSLLIASSSVLGLPWLVAATVRSLAHVKALAKF-----EASEGKEEITGITEQRVS 223 RLVNSKE K+KKG GYHLD+A + +++ S LPW+VAATV SL HVK+LA E E KE IT + E RVS Sbjct: 304 TRLVNSKEFKLKKGSGYHLDLAIVGIIVLVGSFFALPWIVAATVHSLNHVKSLADTNVVATEKGENKEVITAVRENRVS 382 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_983.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_983.9.1 >prot_C-australica_Contig_983.9.1 ID=prot_C-australica_Contig_983.9.1|Name=mRNA_C-australica_Contig_983.9.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=67bp MKKGHGYHLDMAALSLLIASSSVLGLPWLVAATVRSLAHVKALAKFEASEback to top mRNA from alignment at C-australica_Contig_983:5215..5523- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_983.9.1 ID=mRNA_C-australica_Contig_983.9.1|Name=mRNA_C-australica_Contig_983.9.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=309bp|location=Sequence derived from alignment at C-australica_Contig_983:5215..5523- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_983:5215..5523- >mRNA_C-australica_Contig_983.9.1 ID=mRNA_C-australica_Contig_983.9.1|Name=mRNA_C-australica_Contig_983.9.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=201bp|location=Sequence derived from alignment at C-australica_Contig_983:5215..5523- (Chrysoparadoxa australica CS_1217)back to top |