mRNA_C-australica_Contig_9812.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9812.1.1
Unique NamemRNA_C-australica_Contig_9812.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9812.1.1 vs. uniprot
Match: UPI0003B5A354 (peptidylprolyl isomerase n=1 Tax=Oceanicaulis alexandrii TaxID=153233 RepID=UPI0003B5A354)

HSP 1 Score: 519 bits (1336), Expect = 6.400e-180
Identity = 278/285 (97.54%), Postives = 283/285 (99.30%), Query Frame = 1
Query:    1 RLSAGETVSTVVTELSLGEEVALADVQSYQVPDSQIADQAFTMAAGDIAAVQSQLGWRVVRIDAATDPDTPELSELEAELRDGLARDNAEGMMLDALGVFEEARGNGATLEEAAMQAGLIAERIDFVAANGYSADREPALTLLQNPDLLTAAFSAQQGFATDLESYGEDGGYFVVRVDEIEPARLSELSEVREDAAQFWMVRETDERLQTLVDEAHARLEAGETLDAVAESLGTGARVETAVLGRGETAGPFSAQLVGQAFRLPEGQRFAARAGNQTTRAIVLVD 855
            RLSAGETVST+VTELSLGEEVALADVQSYQVPDSQIAD+AFTMAAGDIAAVQSQLGWRVVRIDAATDPDTPELSELEAELRD LARDNAEGMMLDALGVFEEARGNGATLEEAAMQAGLIAERIDFVAANGYSADREPALTLLQNPDLLTAAFSAQQGFATDLESYGEDGGYFVVRVDEIEPARLSELSEVREDAAQFWMVRETD+RLQTLVD+A ARLEAGETLDA+AESLGTGARVETAVLGRGETAGPFSAQLVGQAFRLPEGQRFAARAGNQTTRAIVLVD
Sbjct:  294 RLSAGETVSTIVTELSLGEEVALADVQSYQVPDSQIADRAFTMAAGDIAAVQSQLGWRVVRIDAATDPDTPELSELEAELRDELARDNAEGMMLDALGVFEEARGNGATLEEAAMQAGLIAERIDFVAANGYSADREPALTLLQNPDLLTAAFSAQQGFATDLESYGEDGGYFVVRVDEIEPARLSELSEVREDAAQFWMVRETDDRLQTLVDDAQARLEAGETLDAIAESLGTGARVETAVLGRGETAGPFSAQLVGQAFRLPEGQRFAARAGNQTTRAIVLVD 578          
BLAST of mRNA_C-australica_Contig_9812.1.1 vs. uniprot
Match: A0A2E5ACY9_9PROT (PpiC domain-containing protein n=2 Tax=unclassified Oceanicaulis TaxID=2632123 RepID=A0A2E5ACY9_9PROT)

HSP 1 Score: 426 bits (1095), Expect = 1.840e-143
Identity = 222/285 (77.89%), Postives = 254/285 (89.12%), Query Frame = 1
Query:    1 RLSAGETVSTVVTELSLGEEVALADVQSYQVPDSQIADQAFTMAAGDIAAVQSQLGWRVVRIDAATDPDTPELSELEAELRDGLARDNAEGMMLDALGVFEEARGNGATLEEAAMQAGLIAERIDFVAANGYSADREPALTLLQNPDLLTAAFSAQQGFATDLESYGEDGGYFVVRVDEIEPARLSELSEVREDAAQFWMVRETDERLQTLVDEAHARLEAGETLDAVAESLGTGARVETAVLGRGETAGPFSAQLVGQAFRLPEGQRFAARAGNQTTRAIVLVD 855
            RL AGE+V++VV EL LG+EVALADV++YQVPD+QIA++AF M AG++AAV+SQLGWRV+RIDAA DPDTP+ + +E+ELR  LARD AEGMMLDALGVFEEARGNGATLEEAA +AGL AERIDFV ANGYS DREPALTLLQNPD+L+AAF+AQQGFATDLE YGEDGGYFVVRVDEIEPARL EL EVREDA +FW++RETD RLQ +VD+  ARL+AGETLDA+A SLG GARVE+AVLGR ETAGPF+AQLV QAFR PEG RF +RA NQTTRA+VLVD
Sbjct:  294 RLGAGESVASVVAELGLGDEVALADVEAYQVPDAQIAERAFQMQAGELAAVESQLGWRVLRIDAANDPDTPDFAAVESELRTELARDTAEGMMLDALGVFEEARGNGATLEEAAREAGLFAERIDFVGANGYSPDREPALTLLQNPDILSAAFAAQQGFATDLEGYGEDGGYFVVRVDEIEPARLYELDEVREDATRFWVMRETDNRLQEVVDDVQARLDAGETLDAIAASLGAGARVESAVLGREETAGPFNAQLVAQAFRQPEGGRFVSRADNQTTRALVLVD 578          
BLAST of mRNA_C-australica_Contig_9812.1.1 vs. uniprot
Match: A0A2U2BTA3_9PROT (PpiC domain-containing protein n=1 Tax=Marinicauda salina TaxID=2135793 RepID=A0A2U2BTA3_9PROT)

HSP 1 Score: 275 bits (703), Expect = 1.360e-84
Identity = 146/259 (56.37%), Postives = 189/259 (72.97%), Query Frame = 1
Query:   76 VQSYQVPDSQIADQAFTMAAGDIAAVQSQLGWRVVRIDAATDPDTPELSELEAELRDGLARDNAEGMMLDALGVFEEARGNGATLEEAAMQAGLIAERIDFVAANGYSADREPALTLLQNPDLLTAAFSAQQGFATDLESYGEDGGYFVVRVDEIEPARLSELSEVREDAAQFWMVRETDERLQTLVDEAHARLEAGETLDAVAESLGTGARVETAVLGRGETAGPFSAQLVGQAFRLPEGQRFAARAGNQTTRAIVLV 852
            +++++VPDS +AD  F + A + AAV+++LGWRVVR+  A DP+ P+ + +  ELR  LA ++AE  MLDA  VFEEARG GATL EA  +AGL  ER D+V  NG+SADREPA TLL+ P++L+A F+  +GFA DL++YGE+G YF VRVD I+PARL E++EVR++AA FW VR  DE+LQ  VD+A AR+EAGE LDA+A  LG GA VE A L R ETAGPF+  LV  AF       FAARAG+Q TRA+ +V
Sbjct:  319 LEAFEVPDSAVADAVFGLGADEAAAVEARLGWRVVRVSDAVDPEAPDFASMRDELRSELASESAEAAMLDAFAVFEEARGAGATLSEAGREAGLPVERFDYVGQNGFSADREPAATLLEAPEILSAVFAQPEGFAGDLQNYGENG-YFAVRVDAIDPARLPEVAEVRDEAAAFWRVRRIDEQLQAFVDDALARVEAGEPLDAIAADLGPGASVERATLRRDETAGPFTQALVSAAFNAEVDTPFAARAGDQRTRAVAIV 576          
BLAST of mRNA_C-australica_Contig_9812.1.1 vs. uniprot
Match: A0A4S2GWE0_9PROT (PpiC domain-containing protein n=2 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4S2GWE0_9PROT)

HSP 1 Score: 262 bits (670), Expect = 5.600e-79
Identity = 149/284 (52.46%), Postives = 189/284 (66.55%), Query Frame = 1
Query:    1 RLSAGETVSTVVTELSLGEEVALADVQSYQVPDSQIADQAFTMAAGDIAAVQSQLGWRVVRIDAATDPDTPELSELEAELRDGLARDNAEGMMLDALGVFEEARGNGATLEEAAMQAGLIAERIDFVAANGYSADREPALTLLQNPDLLTAAFSAQQGFATDLESYGEDGGYFVVRVDEIEPARLSELSEVREDAAQFWMVRETDERLQTLVDEAHARLEAGETLDAVAESLGTGARVETAVLGRGETAGPFSAQLVGQAFRLPEGQRFAARAGNQTTRAIVLV 852
            RL+ G     V  E  LGE V L DVQ Y++PDS IAD AF +A G+ AA++++LGWRVV +DAA+DP  P   E    L + LA D AE ++LD L VFEE R  G TL EAA +AG+  ER DFVA +G SA       L    ++LTA F   +GF +DL SYG DGGYFVVRVD IEPA L E+ +VR++A  FW  R+ D+RL   V+ A AR+ AGE+L+A+A+ LG GARVE A L R ETAGPFS Q+V QAF + +G+ F  RAG+Q T+AI +V
Sbjct:  386 RLNEGAAPPAVADEFGLGEPVDLDDVQGYEIPDSAIADAAFGLARGEAAAIEARLGWRVVYVDAASDPVAPSFDEARDALFEDLAADRAEEVVLDKLAVFEEQRAAGLTLSEAAAEAGIPVERFDFVAQSGASAQGFAVQGLADEAEILTAVFELPEGFDSDLTSYG-DGGYFVVRVDAIEPAHLPEVEDVRDEAETFWRFRQVDDRLHEQVEAAMARVAAGESLNAIADELGAGARVEVATLLRTETAGPFSQQMVQQAFGMGQGEPFETRAGDQRTQAIAVV 668          
BLAST of mRNA_C-australica_Contig_9812.1.1 vs. uniprot
Match: UPI001EE0A02F (SurA N-terminal domain-containing protein n=1 Tax=Shewanella sp. ER-Te-42B-Light TaxID=2872342 RepID=UPI001EE0A02F)

HSP 1 Score: 254 bits (648), Expect = 1.600e-76
Identity = 147/287 (51.22%), Postives = 187/287 (65.16%), Query Frame = 1
Query:    1 RLSAGETVSTVVTELSLGEEVALADVQSYQVPDSQIADQAFTMAAGDIAAVQSQLGWRVVRIDAATDPDTPELSELEAELRDGLARDNAEGMMLDALGVFEEARGNGATLEEAAMQAGLIAERIDFVAANGYSADREPALTLLQNPD--LLTAAFSAQQGFATDLESYGEDGGYFVVRVDEIEPARLSELSEVREDAAQFWMVRETDERLQTLVDEAHARLEAGETLDAVAESLGTGARVETAVLGRGETAGPFSAQLVGQAFRLPEGQRFAARAGNQTTRAIVLVD 855
            RL+AGE ++ + T L+LGE VA  D+Q  QVPD  IA   F M AGD+ AV S+LGWRVVR+  A DP+ P L  L  ELR  LA D AE  M  A+  FE+AR  G  L EAA +AG+  ER D++ A+G++ +  PA TLL+     +L   FS   G  ++LE +GE G Y V RV+ +E  RL  + EVREDA  FW +R  DERLQ +VD+A  R +AGE+L+ +A  +G GA VE A LGR ETAGPF+  LV QAF +  G RFAARAG+Q TRAIV+VD
Sbjct:  294 RLAAGEAIADLRTALNLGERVAFTDLQESQVPDRAIAAAVFEMGAGDVRAVDSRLGWRVVRVTGAVDPEAPSLDALRDELRAELAGDQAEEDMFTAMSAFEDARRQGFDLAEAANEAGVPVERFDYITADGFTLEGAPASTLLEEGGDAILQLVFSLTPGLDSELEPFGE-GSYVVARVESVEAPRLPLVDEVREDAEAFWRLRTVDERLQVMVDDALERTQAGESLEGIAALIGGGATVEIATLGREETAGPFNRNLVSQAFGVAPGTRFAARAGDQRTRAIVVVD 579          
BLAST of mRNA_C-australica_Contig_9812.1.1 vs. uniprot
Match: A0A4S2HEM2_9PROT (PpiC domain-containing protein n=1 Tax=Marinicauda pacifica TaxID=1133559 RepID=A0A4S2HEM2_9PROT)

HSP 1 Score: 248 bits (632), Expect = 3.240e-74
Identity = 143/283 (50.53%), Postives = 180/283 (63.60%), Query Frame = 1
Query:    4 LSAGETVSTVVTELSLGEEVALADVQSYQVPDSQIADQAFTMAAGDIAAVQSQLGWRVVRIDAATDPDTPELSELEAELRDGLARDNAEGMMLDALGVFEEARGNGATLEEAAMQAGLIAERIDFVAANGYSADREPALTLLQNPDLLTAAFSAQQGFATDLESYGEDGGYFVVRVDEIEPARLSELSEVREDAAQFWMVRETDERLQTLVDEAHARLEAGETLDAVAESLGTGARVETAVLGRGETAGPFSAQLVGQAFRLPEGQRFAARAGNQTTRAIVLV 852
            L+AG   + V  E  LGE V L DVQ+Y++P S +AD AF   A +  AV+++LGWRVV IDAA DP  P   +  A LR  LA D AE ++LD +   +EAR  G  L++A  QAG+  E  DFV+ +G +AD      L  N ++L AAF    GF TD   YGE+G YFV+RVD +EPAR+ +L+EVRE A   W  R  DERLQ   DEA  RLEAGE L+A+A+S G GARVETA L R ETAGPF+  LV +AF   E + F ARAG+Q TRA+  V
Sbjct:  291 LNAGTDPAEVAAEFGLGEPVELTDVQAYEIPQSAVADAAFEAGANEAVAVEARLGWRVVLIDAANDPQVPGFEQARAGLRAELALDQAEQLVLDKIFELDEARAGGMALDQAGAQAGIPVEYFDFVSQSGVTADGVRVRGLADNEEILAAAFEFPAGFETDPTEYGENG-YFVLRVDAVEPARVPDLAEVRERAETLWRFRTVDERLQERADEAMTRLEAGEDLNAIADSFGEGARVETATLRRSETAGPFNQDLVRRAFAAGENEVFEARAGDQRTRAVARV 572          
BLAST of mRNA_C-australica_Contig_9812.1.1 vs. uniprot
Match: A0A3T0EA27_9PROT (PpiC domain-containing protein n=2 Tax=Glycocaulis TaxID=1433402 RepID=A0A3T0EA27_9PROT)

HSP 1 Score: 241 bits (615), Expect = 9.920e-72
Identity = 138/285 (48.42%), Postives = 184/285 (64.56%), Query Frame = 1
Query:    1 RLSAGETVSTVVTELSLGEEVALADVQSYQVPDSQIADQAFTMAAGDIAAVQSQLGWRVVRIDAATDPDTPELSELEAELRDGLARDNAEGMMLDALGVFEEARGNGATLEEAAMQAGLIAERIDFVAANGYS-ADREPALTLLQNPDLLTAAFSAQQGFATDLESYGEDGGYFVVRVDEIEPARLSELSEVREDAAQFWMVRETDERLQTLVDEAHARLEAGETLDAVAESLGTGARVETAVLGRGETAGPFSAQLVGQAFRLPEGQRFAARAGNQTTRAIVLV 852
            RL AGE  S +     LG+ V L DV+ + VPD  I   AF MA G+  AVQ +LGWR V + AA DP+ P+   +  ELR  LA D AE  +LDAL  FE+ RG GATLEEAA  AG+  ER DF+  + +  +   P ++L++   +L AA + Q+GF +DL  +GE GGYF++RVD + P+ L+ L++VRE A  FW +R+ D+RLQ  V +A +R EAGE+LDA+A S+  G RVE   L RG+TAGPF+  LVG AFR  E   F ARAG+Q TRA+ +V
Sbjct:  290 RLEAGENPSGISAATGLGDPVRLEDVEQFAVPDQVIGQAAFEMAQGEARAVQGRLGWRAVYVQAANDPEVPDFESMADELRTELAGDAAEYRVLDALAEFEDQRGRGATLEEAAEAAGMPLERFDFMTPDAFEISSGSPLMSLIREEAILQAATATQEGFESDLTEFGE-GGYFILRVDAVRPSELAPLADVREQAEAFWRLRQIDDRLQETVTQALSRAEAGESLDAIAASI-PGTRVEETTLSRGQTAGPFTQVLVGAAFRARENTPFEARAGDQRTRAVGIV 572          
BLAST of mRNA_C-australica_Contig_9812.1.1 vs. uniprot
Match: A0A550KKY8_9PROT (PpiC domain-containing protein n=1 Tax=Glycocaulis profundi TaxID=2518983 RepID=A0A550KKY8_9PROT)

HSP 1 Score: 240 bits (612), Expect = 2.970e-71
Identity = 137/284 (48.24%), Postives = 178/284 (62.68%), Query Frame = 1
Query:    1 RLSAGETVSTVVTELSLGEEVALADVQSYQVPDSQIADQAFTMAAGDIAAVQSQLGWRVVRIDAATDPDTPELSELEAELRDGLARDNAEGMMLDALGVFEEARGNGATLEEAAMQAGLIAERIDFVAANGYSADREPALTLLQNPDLLTAAFSAQQGFATDLESYGEDGGYFVVRVDEIEPARLSELSEVREDAAQFWMVRETDERLQTLVDEAHARLEAGETLDAVAESLGTGARVETAVLGRGETAGPFSAQLVGQAFRLPEGQRFAARAGNQTTRAIVLV 852
            R+ AGE      +EL L +    ++ Q+Y+VPD  ++   F MA G+  A+ ++LG RV  ++AA DP+ P   +   +LR   AR  AE  M  AL   E+ARG GATLEEAA +A L  E+ DFV  NG++ + +P ++LL+  ++L   F A  GF TDL  +G DGGYFVVRVDEIE +RL  + EVREDA  +W    TDERL  +  +A AR+ AGETLDAVA  LG  ARVET+ L R ETAGPF   LVG AF   +G+ F ARA  Q TRA+ LV
Sbjct:  290 RIEAGEDADAAASELGLSQAARQSEAQAYEVPDQTVSAAVFEMAEGEARALDTRLGLRVAYVEAAIDPEVPSYEQARDDLRAEFARLTAEDEMFAALDRLEQARGAGATLEEAAAEARLPVEKYDFVTRNGFTMEGQPLMSLLEGQEILQQVFEAPLGFDTDLTEFG-DGGYFVVRVDEIEESRLPRVDEVREDAEAYWSALRTDERLGEIATDALARVRAGETLDAVAADLGGAARVETSTLRRSETAGPFGEMLVGAAFAARQGEAFEARASGQRTRAVGLV 572          
BLAST of mRNA_C-australica_Contig_9812.1.1 vs. uniprot
Match: A0A0P7Y180_9PROT (Peptidyl-prolyl cis-trans isomerase D n=1 Tax=Oceanicaulis sp. HLUCCA04 TaxID=1666904 RepID=A0A0P7Y180_9PROT)

HSP 1 Score: 234 bits (596), Expect = 6.160e-69
Identity = 137/285 (48.07%), Postives = 183/285 (64.21%), Query Frame = 1
Query:    1 RLSAGETVSTVVTELSLGEEVALADVQSYQVPDSQIADQAFTMAAGDIAAVQSQLGWRVVRIDAATDPDTPELSELEAELRDGLARDNAEGMMLDALGVFEEARGNGATLEEAAMQAGLIAERIDFVAANGYS-ADREPALTLLQNPDLLTAAFSAQQGFATDLESYGEDGGYFVVRVDEIEPARLSELSEVREDAAQFWMVRETDERLQTLVDEAHARLEAGETLDAVAESLGTGARVETAVLGRGETAGPFSAQLVGQAFRLPEGQRFAARAGNQTTRAIVLV 852
            RL+AGE  S +     LGE V L +V+ + VPD  + + AF M+ G+  AVQ +LGWR V I+AATDP+TP   ++   LR  LA + AE  +LDAL  FEE RG GA+LEEAA  AG+  ER DF+  +G+  A   P ++++Q   +L    S +QGF ++L  YGE+G YF+VRVD + P+ L+ L EVRE A  FW +R+ D+RLQ  V  A  R EAGETLDA+A S+  G RVE + L R +TAGPF+   V  AFR  E + F ARAG+Q TRA+ +V
Sbjct:  290 RLNAGEAPSGISEATGLGEPVRLENVEQFAVPDQVVGEAAFEMSQGEARAVQGRLGWRAVYIEAATDPETPAFEDVADTLRTELAGEAAEYRVLDALAEFEEQRGRGASLEEAADMAGMPLERFDFITPDGFEIATGAPLMSVVQEELILETINSTEQGFESELTPYGENG-YFIVRVDAVRPSALAPLEEVREQAESFWRLRQIDDRLQETVTAALTRAEAGETLDAIAASI-PGTRVEESTLRREQTAGPFTEGFVSAAFRAREDEPFEARAGDQRTRAVAIV 572          
BLAST of mRNA_C-australica_Contig_9812.1.1 vs. uniprot
Match: A0A5M6ZMB7_9PROT (PpiC domain-containing protein n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZMB7_9PROT)

HSP 1 Score: 228 bits (580), Expect = 1.590e-66
Identity = 134/283 (47.35%), Postives = 175/283 (61.84%), Query Frame = 1
Query:   13 GETVSTVVTELSLGEEVALADVQSYQVPDSQIADQAFTMAAGDIAAVQSQLGWRVVRIDAATDPDTPELSELEAELRDGLARDNAEGMMLDALGVFEEARGNGATLEEAAMQAGLIAERIDFVAANGYSADREPALTLLQNPD--LLTAAFSAQQGFATDLESYGEDGGYFVVRVDEIEPARLSELSEVREDAAQFWMVRETDERLQTLVDEAHARLEAGETLDAVAESLGTGARVETAVLGRGETAGPFSAQLVGQAFRLPEGQRFAARAGNQTTRAIVLVD 855
            G++ S+V     L E V   ++Q  QVPD  IAD  F M  G++ AV S+LGWRVVR+  A DP  P L ++  ELR  LARD AE  M  A+  FE AR +G  L  +A  A +  ER D++ +N ++ D  PA +LL+     +L   FS   G  ++LE +GE   Y V RVD IE ARL  + EVREDA  FW +R  DERLQ +VDEA  R++AG++L++ A  +G GA VE A LGR E+AGPF+  LV QAF    G  FAARAG+Q TRA+V+VD
Sbjct:  298 GQSASSVREAHGLAERVNFTELQQSQVPDRAIADAVFDMGEGEVRAVDSRLGWRVVRVTQAIDPAPPSLEDMRDELRSELARDLAEEAMFTAMNEFESARRSGLDLSASAQAARVPLERFDYMTSNAFTLDGAPAASLLEEGGEAILELVFSLTPGLDSELELFGESN-YVVARVDSIEEARLPTVDEVREDAEAFWRLRTVDERLQVIVDEALERIQAGDSLESAAAVIGDGASVEIATLGREESAGPFNRNLVSQAFNASPGTPFAARAGDQRTRAVVIVD 579          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9812.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0003B5A3546.400e-18097.54peptidylprolyl isomerase n=1 Tax=Oceanicaulis alex... [more]
A0A2E5ACY9_9PROT1.840e-14377.89PpiC domain-containing protein n=2 Tax=unclassifie... [more]
A0A2U2BTA3_9PROT1.360e-8456.37PpiC domain-containing protein n=1 Tax=Marinicauda... [more]
A0A4S2GWE0_9PROT5.600e-7952.46PpiC domain-containing protein n=2 Tax=Marinicauda... [more]
UPI001EE0A02F1.600e-7651.22SurA N-terminal domain-containing protein n=1 Tax=... [more]
A0A4S2HEM2_9PROT3.240e-7450.53PpiC domain-containing protein n=1 Tax=Marinicauda... [more]
A0A3T0EA27_9PROT9.920e-7248.42PpiC domain-containing protein n=2 Tax=Glycocaulis... [more]
A0A550KKY8_9PROT2.970e-7148.24PpiC domain-containing protein n=1 Tax=Glycocaulis... [more]
A0A0P7Y180_9PROT6.160e-6948.07Peptidyl-prolyl cis-trans isomerase D n=1 Tax=Ocea... [more]
A0A5M6ZMB7_9PROT1.590e-6647.35PpiC domain-containing protein n=1 Tax=Alkalicauli... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9812contigC-australica_Contig_9812:1..855 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1122613.ATUP01000001_gene102
Preferred nameppiD
PFAMsRotamase_2,SurA_N_3
Model size855
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K01802,ko:K03770
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.05e-180
EggNOG OGsCOG0760@1|root,COG0760@2|Bacteria,1MWV0@1224|Proteobacteria,2TRYU@28211|Alphaproteobacteria,43XJS@69657|Hyphomonadaceae
EC5.2.1.8
DescriptionCOG0760 Parvulin-like peptidyl-prolyl isomerase
Cds size855
COG categoryO
BRITEko00000,ko01000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588848.9608421-CDS-C-australica_Contig_9812:0..8551682588848.9608421-CDS-C-australica_Contig_9812:0..855Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9812 1..855 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9812.1.1prot_C-australica_Contig_9812.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9812 1..855 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9812.1.1

>prot_C-australica_Contig_9812.1.1 ID=prot_C-australica_Contig_9812.1.1|Name=mRNA_C-australica_Contig_9812.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=285bp
RLSAGETVSTVVTELSLGEEVALADVQSYQVPDSQIADQAFTMAAGDIAA
VQSQLGWRVVRIDAATDPDTPELSELEAELRDGLARDNAEGMMLDALGVF
EEARGNGATLEEAAMQAGLIAERIDFVAANGYSADREPALTLLQNPDLLT
AAFSAQQGFATDLESYGEDGGYFVVRVDEIEPARLSELSEVREDAAQFWM
VRETDERLQTLVDEAHARLEAGETLDAVAESLGTGARVETAVLGRGETAG
PFSAQLVGQAFRLPEGQRFAARAGNQTTRAIVLVD
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mRNA from alignment at C-australica_Contig_9812:1..855-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9812.1.1 ID=mRNA_C-australica_Contig_9812.1.1|Name=mRNA_C-australica_Contig_9812.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=855bp|location=Sequence derived from alignment at C-australica_Contig_9812:1..855- (Chrysoparadoxa australica CS_1217)
CGTCTGAGCGCCGGCGAAACCGTCTCGACCGTCGTCACCGAATTGAGCCT GGGCGAGGAAGTCGCTCTCGCCGACGTGCAATCGTATCAGGTCCCTGACA GTCAGATCGCAGACCAGGCCTTCACCATGGCGGCGGGCGACATCGCCGCC GTTCAGAGCCAGCTCGGCTGGCGCGTGGTGCGCATCGACGCTGCGACGGA CCCGGATACGCCAGAGCTCTCGGAGCTTGAGGCTGAATTGCGCGACGGGC TGGCGCGTGACAACGCCGAGGGCATGATGCTGGATGCGCTGGGCGTGTTC GAGGAAGCGCGCGGCAACGGCGCGACGCTGGAAGAAGCCGCCATGCAGGC GGGCCTGATCGCGGAACGGATCGATTTCGTCGCCGCCAACGGCTATTCCG CAGATCGCGAACCGGCGCTCACCCTGTTGCAGAATCCCGATCTGTTGACG GCTGCGTTCAGCGCCCAGCAAGGCTTCGCCACTGACCTTGAAAGCTATGG CGAAGACGGCGGCTATTTCGTGGTGCGCGTGGATGAAATCGAGCCGGCGC GTCTGTCCGAGCTTTCTGAAGTGCGTGAAGACGCCGCGCAATTCTGGATG GTGCGTGAAACGGATGAACGTCTGCAAACCCTCGTCGACGAAGCGCACGC GCGCCTTGAGGCTGGTGAAACCCTGGACGCTGTCGCCGAGTCTCTAGGCA CGGGCGCACGCGTGGAAACCGCTGTTCTGGGCCGCGGCGAAACCGCAGGG CCGTTCAGCGCGCAACTGGTGGGTCAGGCCTTCCGTCTGCCTGAAGGTCA GCGCTTCGCCGCGCGCGCCGGCAACCAGACCACCCGCGCTATCGTCCTCG TCGAT
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Coding sequence (CDS) from alignment at C-australica_Contig_9812:1..855-

>mRNA_C-australica_Contig_9812.1.1 ID=mRNA_C-australica_Contig_9812.1.1|Name=mRNA_C-australica_Contig_9812.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=855bp|location=Sequence derived from alignment at C-australica_Contig_9812:1..855- (Chrysoparadoxa australica CS_1217)
CGTCTGAGCGCCGGCGAAACCGTCTCGACCGTCGTCACCGAATTGAGCCT
GGGCGAGGAAGTCGCTCTCGCCGACGTGCAATCGTATCAGGTCCCTGACA
GTCAGATCGCAGACCAGGCCTTCACCATGGCGGCGGGCGACATCGCCGCC
GTTCAGAGCCAGCTCGGCTGGCGCGTGGTGCGCATCGACGCTGCGACGGA
CCCGGATACGCCAGAGCTCTCGGAGCTTGAGGCTGAATTGCGCGACGGGC
TGGCGCGTGACAACGCCGAGGGCATGATGCTGGATGCGCTGGGCGTGTTC
GAGGAAGCGCGCGGCAACGGCGCGACGCTGGAAGAAGCCGCCATGCAGGC
GGGCCTGATCGCGGAACGGATCGATTTCGTCGCCGCCAACGGCTATTCCG
CAGATCGCGAACCGGCGCTCACCCTGTTGCAGAATCCCGATCTGTTGACG
GCTGCGTTCAGCGCCCAGCAAGGCTTCGCCACTGACCTTGAAAGCTATGG
CGAAGACGGCGGCTATTTCGTGGTGCGCGTGGATGAAATCGAGCCGGCGC
GTCTGTCCGAGCTTTCTGAAGTGCGTGAAGACGCCGCGCAATTCTGGATG
GTGCGTGAAACGGATGAACGTCTGCAAACCCTCGTCGACGAAGCGCACGC
GCGCCTTGAGGCTGGTGAAACCCTGGACGCTGTCGCCGAGTCTCTAGGCA
CGGGCGCACGCGTGGAAACCGCTGTTCTGGGCCGCGGCGAAACCGCAGGG
CCGTTCAGCGCGCAACTGGTGGGTCAGGCCTTCCGTCTGCCTGAAGGTCA
GCGCTTCGCCGCGCGCGCCGGCAACCAGACCACCCGCGCTATCGTCCTCG
TCGAT
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