mRNA_C-australica_Contig_981.4.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_981.4.2 vs. uniprot
Match: A0A835ZI71_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI71_9STRA) HSP 1 Score: 212 bits (540), Expect = 5.700e-64 Identity = 99/158 (62.66%), Postives = 119/158 (75.32%), Query Frame = 1 Query: 247 LPGLRGKDYGKSATLYPDFVQLSNGLQVKDVKIGTGDPPRVGDRAVIDWQGYTIGYNSRPFQLKNGVKGSAFEGDQDLYRFKVGSGAVIPGLDAAVRDMKRGGKRQVIVPAELGYPASDPKHNVVGPRPSTFSGQRALDFVLESQGLVDKTLLFIITL 720 +P LRG DYGK YPDFV+L +GLQ KD+K+G+G+ P GDR VIDW+GYTIGY RPFQLKN VKG AF D D RF +G G VIP L+ A+ MK GG RQ+IVP E+GYP SD H VGP+PSTFSG RALDFVL+++G++DKTLLF + L Sbjct: 1 MPALRGLDYGKPRAKYPDFVELPSGLQYKDIKVGSGEKPSTGDRVVIDWEGYTIGYYGRPFQLKNSVKGGAFAADTDFLRFTLGDGTVIPALNEALATMKEGGVRQIIVPNEIGYPESDRGHTRVGPKPSTFSGNRALDFVLQNKGIIDKTLLFNVEL 158
BLAST of mRNA_C-australica_Contig_981.4.2 vs. uniprot
Match: A0A5J4Z9W9_PORPP (Peptidylprolyl isomerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z9W9_PORPP) HSP 1 Score: 213 bits (541), Expect = 1.240e-62 Identity = 112/202 (55.45%), Postives = 135/202 (66.83%), Query Frame = 1 Query: 118 RRDFTRQVTTSVAGVLLGATASDAAPVRMQLPPEDKGSSQMVDLPGLRGKDYGKSATLYPDFVQLSNGLQVKDVKIGTGDPPRVGDRAVIDWQGYTIGYNSRPFQLKNGVKGSAFEG-DQDLYRFKVGSGAVIPGLDAAVRDMKRGGKRQVIVPAELGYPASDPKHNVVGPRPSTFSGQRALDFVLESQGLVDKTLLFIITL 720 RR+ R V S GV G S + + + V + GL+GKDYGK A Y DFV+ +GLQ KDV++GTG P GDRAV+ W+GYTIGY R F+ K +G AF+ D+D +RF +GSG IP LD AVR M+ GG RQVIVP ELGYPASDP+H VGPRPSTFSGQRALDFVLE++GL+DKTLL I L Sbjct: 82 RRELLRAVLVSGLGVFAGNAISS-----------ESMAGEFVKMEGLQGKDYGKQAMTYSDFVRTDSGLQYKDVRVGTGKQPEEGDRAVLKWEGYTIGYLGRIFEAKGKAQGGAFDSADKDYFRFVLGSGTAIPALDEAVRSMREGGVRQVIVPPELGYPASDPRHEKVGPRPSTFSGQRALDFVLENRGLIDKTLLINIQL 272
BLAST of mRNA_C-australica_Contig_981.4.2 vs. uniprot
Match: L1J2M3_GUITC (Peptidylprolyl isomerase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J2M3_GUITC) HSP 1 Score: 196 bits (499), Expect = 8.700e-58 Identity = 97/167 (58.08%), Postives = 120/167 (71.86%), Query Frame = 1 Query: 247 LPGLRGKDYGKSATLYPDFVQLSNGLQVKDVKIGTGDPPRVGDRAVIDWQGYTIGYNSRPFQLKNGVKGSAFEGDQDLYRFKVGSGAVIPGLDAAVRDMKRGGKRQVIVPAELGYPASDPKHNVVGPRPSTFSGQRALDFVLESQGLVDKTLLF---IITLDMRRDG 738 +P L+GKDYGK+ YPDFV +GLQ KDVK+G G+ P GDR V DW+GYTIGY R FQ KNGVKG AF + D R +GS VIPGL+ ++ MK GG RQ++V ELGYP DP H VGP+PSTF GQRAL+FVL ++GL+DKTLLF +I +D ++DG Sbjct: 1 MPALKGKDYGKTKMKYPDFVATPSGLQYKDVKVGNGESPEDGDRVVFDWEGYTIGYYGRIFQAKNGVKGGAFADETDFQRCVLGSHTVIPGLEEGLKGMKVGGIRQLVVTPELGYPEDDPSHTRVGPKPSTFDGQRALNFVLFNKGLIDKTLLFNIKVIRID-KKDG 166
BLAST of mRNA_C-australica_Contig_981.4.2 vs. uniprot
Match: B7F8B9_ORYSJ (Peptidylprolyl isomerase n=15 Tax=Oryzeae TaxID=147380 RepID=B7F8B9_ORYSJ) HSP 1 Score: 197 bits (500), Expect = 4.110e-57 Identity = 93/170 (54.71%), Postives = 126/170 (74.12%), Query Frame = 1 Query: 220 DKGSS--QMVDLPGLRGKDYGKSATLYPDFVQLSNGLQVKDVKIGTGDPPRVGDRAVIDWQGYTIGYNSRPFQLKNGVKGSAFEG-DQDLYRFKVGSGAVIPGLDAAVRDMKRGGKRQVIVPAELGYPASDPKHNVVGPRPSTFSGQRALDFVLESQGLVDKTLLFIITL 720 DKG++ + D+P LRGKDYGK+ YPD+ + +GLQ KD+++G G P+ G+ V+DW GYTIGY R F+ +N KG +FEG D+D ++FK+GSG VIP + A+ DM GG R++IVP +LGYP +D +N +GP+P+TFSGQRALDFVL +QGL+DKTLLF I L Sbjct: 63 DKGAAKAEFADMPALRGKDYGKTKMKYPDYTETESGLQYKDLRVGDGPSPKKGETVVVDWDGYTIGYYGRIFEARNKTKGGSFEGGDKDFFKFKIGSGQVIPAFEEAISDMAPGGVRRIIVPPDLGYPDND--YNKLGPKPTTFSGQRALDFVLRNQGLIDKTLLFDIEL 230
BLAST of mRNA_C-australica_Contig_981.4.2 vs. uniprot
Match: UPI000B8CACB1 (peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic isoform X1 n=2 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CACB1) HSP 1 Score: 197 bits (501), Expect = 5.060e-57 Identity = 103/206 (50.00%), Postives = 141/206 (68.45%), Query Frame = 1 Query: 109 LASRRDFTRQ-VTTSVAGVLLGATASDAAPVRMQLPPEDKGSSQMVDLPGLRGKDYGKSATLYPDFVQLSNGLQVKDVKIGTGDPPRVGDRAVIDWQGYTIGYNSRPFQLKNGVKGSAFEGD-QDLYRFKVGSGAVIPGLDAAVRDMKRGGKRQVIVPAELGYPASDPKHNVVGPRPSTFSGQRALDFVLESQGLVDKTLLFIITL 720 +A R DF R+ V S GVL GA + ++ + +S+ D+P LRGKDYGK+ YPD+++ +GLQ KD+++GTG P +G+ V+DW GYTIGY R F+ +N KG +FEGD +D ++F++GS VIP + AV M GG R++IVP ELGYP +D +N GP+P+TFSGQRALDFVL++QGL+DKTLLF I L Sbjct: 53 IAYRHDFVRRKVLISTIGVLAGAMWNPSSDMEAV-------ASEFADMPALRGKDYGKTKMRYPDYIETESGLQYKDLRVGTGPRPTMGETVVVDWDGYTIGYYGRIFEARNKTKGGSFEGDDKDFFKFRLGSQEVIPAFEEAVSGMALGGIRRIIVPPELGYPEND--YNKSGPKPTTFSGQRALDFVLKNQGLIDKTLLFDIEL 249
BLAST of mRNA_C-australica_Contig_981.4.2 vs. uniprot
Match: W1PER4_AMBTC (Peptidylprolyl isomerase n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1PER4_AMBTC) HSP 1 Score: 194 bits (494), Expect = 6.890e-57 Identity = 93/165 (56.36%), Postives = 122/165 (73.94%), Query Frame = 1 Query: 229 SSQMVDLPGLRGKDYGKSATLYPDFVQLSNGLQVKDVKIGTGDPPRVGDRAVIDWQGYTIGYNSRPFQLKNGVKGSAFEG-DQDLYRFKVGSGAVIPGLDAAVRDMKRGGKRQVIVPAELGYPASDPKHNVVGPRPSTFSGQRALDFVLESQGLVDKTLLFIITL 720 +S+ D+P LRGKDYGK+ YPD+V+ +GLQ KD+++G+G P++G+ V+DW GYTIGY R F+ +N KG +FEG D+D Y+F +GS VIP + AV M GG R++IVP ELGYP +D N GPRP+TFSGQRALDFVL++QGL+DKTLLF I L Sbjct: 20 ASEFADMPALRGKDYGKTKMRYPDYVETKSGLQYKDLRVGSGASPKMGETVVVDWDGYTIGYYGRIFEARNKTKGGSFEGGDKDFYKFVLGSNQVIPAFEEAVASMSLGGVRRIIVPPELGYPDND--FNKSGPRPTTFSGQRALDFVLKNQGLIDKTLLFDIEL 182
BLAST of mRNA_C-australica_Contig_981.4.2 vs. uniprot
Match: A0A2G9FYB5_9LAMI (Peptidylprolyl isomerase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9FYB5_9LAMI) HSP 1 Score: 196 bits (499), Expect = 1.030e-56 Identity = 93/165 (56.36%), Postives = 124/165 (75.15%), Query Frame = 1 Query: 229 SSQMVDLPGLRGKDYGKSATLYPDFVQLSNGLQVKDVKIGTGDPPRVGDRAVIDWQGYTIGYNSRPFQLKNGVKGSAFEGD-QDLYRFKVGSGAVIPGLDAAVRDMKRGGKRQVIVPAELGYPASDPKHNVVGPRPSTFSGQRALDFVLESQGLVDKTLLFIITL 720 +S+ D+P LRGKDYGK+ YPD+++ ++GLQ KD+++G+G P++G+ V+DW GYTIGY R F+ +N KG +FEGD +D Y+F++GS VIP L+ AV M GG R++IVP ELGYP +D N GPRP+TFSGQRALDFVL +QGL+DKTLLF I L Sbjct: 85 ASEYADMPALRGKDYGKTKMRYPDYIETNSGLQYKDLRVGSGPTPKIGETVVVDWDGYTIGYYGRIFEARNKTKGGSFEGDDKDFYKFRLGSQQVIPALEEAVSGMALGGVRRIIVPPELGYPDND--FNKKGPRPTTFSGQRALDFVLRNQGLIDKTLLFDIEL 247
BLAST of mRNA_C-australica_Contig_981.4.2 vs. uniprot
Match: A0A2K1J894_PHYPA (Peptidylprolyl isomerase n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1J894_PHYPA) HSP 1 Score: 197 bits (500), Expect = 1.050e-56 Identity = 96/164 (58.54%), Postives = 121/164 (73.78%), Query Frame = 1 Query: 232 SQMVDLPGLRGKDYGKSATLYPDFVQLSNGLQVKDVKIGTGDPPRVGDRAVIDWQGYTIGYNSRPFQLKNGVKGSAFEGDQ-DLYRFKVGSGAVIPGLDAAVRDMKRGGKRQVIVPAELGYPASDPKHNVVGPRPSTFSGQRALDFVLESQGLVDKTLLFIITL 720 S D+P LRGKDYGK+ YPD+++ +GLQ KD++IGTG P VG+ V+DW GYTIGY R F+ +N KG +FEGD+ + +RFK+G+ VIP D AV MK GG R++IVP ELGYP +D +N GPRP+TFSGQRALDFVL +QGL+DKTLLF I L Sbjct: 102 SDYADMPALRGKDYGKTKMKYPDYIETESGLQYKDLRIGTGSAPNVGNLVVVDWDGYTIGYYGRIFEARNKAKGGSFEGDEKNFFRFKLGNSEVIPAFDEAVATMKVGGIRRLIVPPELGYPNND--YNQKGPRPTTFSGQRALDFVLRNQGLIDKTLLFDIEL 263
BLAST of mRNA_C-australica_Contig_981.4.2 vs. uniprot
Match: A0A6P6VCW2_COFAR (Peptidylprolyl isomerase n=5 Tax=Coffea TaxID=13442 RepID=A0A6P6VCW2_COFAR) HSP 1 Score: 197 bits (500), Expect = 1.120e-56 Identity = 100/197 (50.76%), Postives = 134/197 (68.02%), Query Frame = 1 Query: 133 RQVTTSVAGVLLGATASDAAPVRMQLPPEDKGSSQMVDLPGLRGKDYGKSATLYPDFVQLSNGLQVKDVKIGTGDPPRVGDRAVIDWQGYTIGYNSRPFQLKNGVKGSAFEG-DQDLYRFKVGSGAVIPGLDAAVRDMKRGGKRQVIVPAELGYPASDPKHNVVGPRPSTFSGQRALDFVLESQGLVDKTLLFIITL 720 R+V S G+L+ +T + A + SS+ D+P LRGKDYGK+ YPD+++ +GLQ KD+++G+G P++G+ V+DW GYTIGY R F+ +N KG +FEG D++ Y+FK+GS VIP AV M GG R++IVP ELGYP +D N GPRP+TFSGQRALDFVL +QGL+DKTLLF I L Sbjct: 78 RKVVLSSVGLLMASTYFNGAASAL--------SSRFADMPALRGKDYGKTKMRYPDYIETESGLQYKDLRVGSGPTPKIGETVVVDWDGYTIGYYGRIFEARNKTKGGSFEGGDKEFYKFKIGSEEVIPAFQEAVSGMALGGVRRIIVPPELGYPDND--FNKKGPRPTTFSGQRALDFVLRNQGLIDKTLLFDIEL 264
BLAST of mRNA_C-australica_Contig_981.4.2 vs. uniprot
Match: A9RLA9_PHYPA (Peptidylprolyl isomerase (Fragment) n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RLA9_PHYPA) HSP 1 Score: 192 bits (489), Expect = 1.660e-56 Identity = 94/159 (59.12%), Postives = 119/159 (74.84%), Query Frame = 1 Query: 247 LPGLRGKDYGKSATLYPDFVQLSNGLQVKDVKIGTGDPPRVGDRAVIDWQGYTIGYNSRPFQLKNGVKGSAFEGDQ-DLYRFKVGSGAVIPGLDAAVRDMKRGGKRQVIVPAELGYPASDPKHNVVGPRPSTFSGQRALDFVLESQGLVDKTLLFIITL 720 +P LRGKDYGK+ YPD+++ +GLQ KD++IGTG P VG+ V+DW GYTIGY R F+ +N KG +FEGD+ + +RFK+G+ VIP D AV MK GG R++IVP ELGYP +D +N GPRP+TFSGQRALDFVL +QGL+DKTLLF I L Sbjct: 1 VPALRGKDYGKTKMKYPDYIETESGLQYKDLRIGTGSAPNVGNLVVVDWDGYTIGYYGRIFEARNKAKGGSFEGDEKNFFRFKLGNSEVIPAFDEAVATMKVGGIRRLIVPPELGYPNND--YNQKGPRPTTFSGQRALDFVLRNQGLIDKTLLFDIEL 157 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_981.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_981.4.2 >prot_C-australica_Contig_981.4.2 ID=prot_C-australica_Contig_981.4.2|Name=mRNA_C-australica_Contig_981.4.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=302bp MNVVLLLSALLAPGTAFKLSLSASDSSDVQLASRRDFTRQVTTSVAGVLLback to top mRNA from alignment at C-australica_Contig_981:15455..17529- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_981.4.2 ID=mRNA_C-australica_Contig_981.4.2|Name=mRNA_C-australica_Contig_981.4.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2075bp|location=Sequence derived from alignment at C-australica_Contig_981:15455..17529- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_981:15455..17529- >mRNA_C-australica_Contig_981.4.2 ID=mRNA_C-australica_Contig_981.4.2|Name=mRNA_C-australica_Contig_981.4.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=906bp|location=Sequence derived from alignment at C-australica_Contig_981:15455..17529- (Chrysoparadoxa australica CS_1217)back to top |