mRNA_C-australica_Contig_980.1.2 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_980.1.2 vs. uniprot
Match: A0A6H5KNJ0_9PHAE (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNJ0_9PHAE) HSP 1 Score: 168 bits (426), Expect = 2.440e-45 Identity = 99/216 (45.83%), Postives = 128/216 (59.26%), Query Frame = 1 Query: 43 MLIKDPTRLLLLCILRSAA----AMKHASVSVRLARKGDIPSITKCNLESLPENYTPQFYDMHLMNWPQLALVAEHTPPSQGD---PKVVGYVLGRVDSPQP----------ASWSM----SG-----MPRESSGHVTSLAVSDEFRRRGIADALMLTLHEKMRLHHRAACSKLHVRKSNTGAIKLYRDVMGYRLESVVHGYYEDGEDAYLMKCDL 612 M+I++ RL L L S A ++ + RLARK DI SI CNLE+LPENY+ FYD H+ +WP+LALVAEH + + P+VVGYVLGR++ WS SG M +GHVTSLAV FRR G A LM LHE+M H+RA LHVRKSN GAI+LY +++GY++ V YY DGEDA++M+ +L Sbjct: 1 MIIRENARLFFLSALSSNAKCEDVLRPSDFDFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEINNANXXXXXXTALPGWSCRTQKSGRGGAMMKAPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYRANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAEL 216
BLAST of mRNA_C-australica_Contig_980.1.2 vs. uniprot
Match: D7FT09_ECTSI (N-acetyltransferase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT09_ECTSI) HSP 1 Score: 164 bits (415), Expect = 3.820e-45 Identity = 95/218 (43.58%), Postives = 128/218 (58.72%), Query Frame = 1 Query: 43 MLIKDPTRLLLLCILRSAA----AMKHASVSVRLARKGDIPSITKCNLESLPENYTPQFYDMHLMNWPQLALVAEHTPPSQGD---PKVVGYVLGRVD----SPQPASWSMSGMPRES-----------------SGHVTSLAVSDEFRRRGIADALMLTLHEKMRLHHRAACSKLHVRKSNTGAIKLYRDVMGYRLESVVHGYYEDGEDAYLMKCDL 612 M+I++ RL L L S A ++ + RLARK DI SI CNLE+LPENY+ FYD H+ +WP+LALVAEH + + P+VVGYVLGR++ + + +P S +GHVTSLAV FRR G A LM LHE+M H++A LHVRKSN GAI+LY +++GY++ V YY DGEDA++M+ +L Sbjct: 1 MIIRENARLFFLSALSSNAKCEDVLRPSDFDFRLARKSDIKSIRHCNLETLPENYSTDFYDTHIKDWPELALVAEHADRRRNEDQQPQVVGYVLGRIEVNHANXXXXXXXXTALPGWSCRTQKSGRGGAMAIPPPTGHVTSLAVLPGFRRCGAASQLMDMLHERMNYHYKANKVSLHVRKSNRGAIRLYEELLGYKVAGVASSYYSDGEDAFVMEAEL 218
BLAST of mRNA_C-australica_Contig_980.1.2 vs. uniprot
Match: A0A836CFW2_9STRA (Acyl-CoA N-acyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFW2_9STRA) HSP 1 Score: 154 bits (388), Expect = 6.550e-42 Identity = 85/188 (45.21%), Postives = 113/188 (60.11%), Query Frame = 1 Query: 91 SAAAMKHASVSVRLARKGDIPSITKCNLESLPENYTPQFYDMHLMNWPQLALVAEHTPPSQGDPKVVGYVLGRVDSPQPASWS--MSGMPRESSGHVTSLAVSDEFRRRGIADALMLTLHEKMRLHHRAACSKLHVRKSNTGAIKLYRDVMGYRLESVVHGYYEDGEDAYLMKCDLRQARVGESARMR 648 S+A +K ++++VRLAR D+ SI NL +LPENYT FYD L +P+L+LVAE +P G VVGYVLG+ QP +W+ G GH+TSLAV+ E+RR+GIA L+ LHE++ H + LHVR+SN A++LYRDV GY + SV GYY G + R GE R R Sbjct: 2 SSAIVKSSNITVRLARSNDVASIRNINLRTLPENYTKDFYDNQLFQYPKLSLVAESSPDEDGRSMVVGYVLGQTKGLQP-TWAGGSRGPFAAKEGHITSLAVAPEYRRQGIAMRLIAALHERLEGEHGSRDCSLHVRRSNASAVRLYRDVFGYGVASVERGYYTAGGXXXXXRRGARAGAAGERGRRR 188
BLAST of mRNA_C-australica_Contig_980.1.2 vs. uniprot
Match: F0YEX8_AURAN (Putative N-acetyltransferase activity n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEX8_AURAN) HSP 1 Score: 150 bits (380), Expect = 7.290e-41 Identity = 85/167 (50.90%), Postives = 103/167 (61.68%), Query Frame = 1 Query: 124 VRLARKGDIPSITKCNLESLPENYTPQFYDMHLMNWPQLALVAEHTPPSQGDPKVVGYVLGRVDSPQPASWSMSGMPRESSGHVTSLAVSDEFRRRGIADALMLTLHEKMRLHHRAACSKLHVRKSNTGAIKLYRDVMGYRLESVVHGYYEDGEDAYLMKCDLRQAR 624 +R AR DIP I CN SLPENY FY HL +W LA VA+ D +VVGYVLGRV+ + + G R + GH+TSLAVSD FRRRG+A LM+ +H++M SKLHVR SN GA++LY +GY + VV GYY DGE AYLM DL AR Sbjct: 3 IRRARADDIPQIQVCNRASLPENYNDSFYARHLADWGHLAFVAD------ADREVVGYVLGRVNERHTETPAGPGSTRPTEGHITSLAVSDRFRRRGVAKQLMVAVHDEM--EKLVQTSKLHVRCSNAGALQLYAS-LGYAVVDVVQGYYHDGEAAYLMAADLEAAR 160
BLAST of mRNA_C-australica_Contig_980.1.2 vs. uniprot
Match: A0A1Z5KHW6_FISSO (Ribosomal-protein-alanine N-acetyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KHW6_FISSO) HSP 1 Score: 151 bits (381), Expect = 9.240e-40 Identity = 86/191 (45.03%), Postives = 112/191 (58.64%), Query Frame = 1 Query: 100 AMKHASVSVRLARKGDIPSITKCNLESLPENYTPQFYDMHLMNWPQLALVA-EHTP----------PSQGDPKVVGYVLGRVDS--------PQPASWSMSGM-PRESSGHVTSLAVSDEFRRRGIADALMLTLHEKMRLHHRAACSKLHVRKSNTGAIKLYRDVMGYRLESVVHGYYEDGEDAYLMKCDL 612 A K ++++RLAR+ D+PSI +CNL +LPENY FY HL WP+L+LV E TP PSQ + VV YVLGR+DS A WS + RE GH+TSLAVS E+RR+G+A LM LH +++ H+R LHVR+SN A+ LY+ GY + YY+DGED Y M L Sbjct: 38 AWKQPALTLRLARRTDVPSIQRCNLATLPENYNAAFYTQHLRQWPELSLVVVEETPSNTFGSFPGSPSQPESNVVAYVLGRIDSRTIPVVPTSSHALWSTQQVYQREEFGHITSLAVSHEYRRQGLAGELMEQLHYQLQKHYRVPRVGLHVRQSNQPAVTLYQQKFGYEPAEKIPNYYQDGEDGYYMVKSL 228
BLAST of mRNA_C-australica_Contig_980.1.2 vs. uniprot
Match: A0A7S4AY40_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AY40_9STRA) HSP 1 Score: 140 bits (353), Expect = 9.230e-36 Identity = 89/212 (41.98%), Postives = 118/212 (55.66%), Query Frame = 1 Query: 64 RLLLLCILRSAA-----AMKHASVSVRLARKGDIPSITKCNLESLPENYTPQFYDMHLMNWPQLALVAE--HTPPS---------------------QGDPKVVGYVLGRVDSPQPASW----SMSGMPRESSGHVTSLAVSDEFRRRGIADALMLTLHEKMRLHHRAACSKLHVRKSNTGAIKLYRDVMGYRLESVVHGYYEDGEDAYLMK 603 +LL+ +LRS+A A S+ +RLA + D+P+I +CNL LPENY FY HL WP LALVAE H P Q +PK+V YVLG+V++ + S +G E GHVTSLAV +FRR G+A A+M LH ++ HH A LHVR SN A +LY+D GY ++ + YY+DGEDAY M+ Sbjct: 6 KLLMFTLLRSSACSIRQAPTKTSIQLRLATRTDVPAIQRCNLACLPENYNSNFYCSHLRQWPDLALVAEEIHHPQQNEMAEDRHQQSRKHFPGFTGGQNEPKIVAYVLGKVETRPSIDYDNPTSRNGRV-ERLGHVTSLAVQKDFRRLGLAKAMMSQLHYHLQ-HHGIASVGLHVRTSNLAACRLYQDD-GYEVDQTIKSYYQDGEDAYFMR 214
BLAST of mRNA_C-australica_Contig_980.1.2 vs. uniprot
Match: A0A7S1G113_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G113_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.800e-35 Identity = 84/200 (42.00%), Postives = 110/200 (55.00%), Query Frame = 1 Query: 118 VSVRLARKGDIPSITKCNLESLPENYTPQFYDMHLMNWPQLALVAEH---------------------TPPSQ------------GDPKVVGYVLGRVDSPQPASWSMSGMPR--ESSGHVTSLAVSDEFRRRGIADALMLTLHEKMRLHHRAACSKLHVRKSNTGAIKLYRDVMGYRLESVVHGYYEDGEDAYLMKCDL 612 V +R+AR+ D+ I CNL +LPENY FY HL +WP+LALVAE +PP+ G+ +++GYVLG+V + G P E GHVTSLA+ +FRR+G+A LM LH M+ H A LHVR SN A +LY + MGYR+ V+ GYY+DGEDAYLM+ DL Sbjct: 33 VLLRVARRTDVQGIQSCNLANLPENYHTAFYVNHLRDWPELALVAERITSPTAASSSNHMMTKTASRDSPPATIPVHSSDEPSNVGNTEIIGYVLGKVREEE-----AEGRPGHVERIGHVTSLAIMSDFRRQGLAGELMRQLHYNMQRSHSADGVGLHVRVSNVAATQLYSESMGYRVAGVIKGYYQDGEDAYLMRKDL 227
BLAST of mRNA_C-australica_Contig_980.1.2 vs. uniprot
Match: A0A7S4V9L4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V9L4_9STRA) HSP 1 Score: 140 bits (354), Expect = 6.060e-35 Identity = 87/220 (39.55%), Postives = 118/220 (53.64%), Query Frame = 1 Query: 88 RSAAAMKHASVSVRLARKGDIPSITKCNLESLPENYTPQFYDMHLMNWPQLALVAEHTP--------------------PSQGDPKVVGYVLGRVDS------PQPASWSMSGMP----------------------RESSGHVTSLAVSDEFRRRGIADALMLTLHEKMRLHHRAACSKLHVRKSNTGAIKLYRDVMGYRLESVVHGYYEDGEDAYLMK 603 RSA ++ +++RLAR+ D+PSI +CNL +LPENY FY H+ +P+LALVAEH P P+ P+++GYVLG+VD P+ + S +P E+ GHVTSLAV ++RRRG+A LM LH+ MR + A LHVR SN A +LY + MGY + V+ YY+DGEDAY MK Sbjct: 47 RSAPSL-DGHINLRLARRADVPSIQRCNLATLPENYNANFYANHMKLFPELALVAEHIPSGCDTSSGGGGKLFGKYDPSPTTRTPEIIGYVLGKVDEKPVQYPPREFLYPPSTVPGLDDDEEESLLAHMIESQRIPRTETLGHVTSLAVLSDYRRRGLAATLMNQLHQHMRECYGADAVGLHVRVSNRAATRLYCEGMGYEVADVIPQYYQDGEDAYFMK 265
BLAST of mRNA_C-australica_Contig_980.1.2 vs. uniprot
Match: B8CB65_THAPS (N-acetyltransferase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB65_THAPS) HSP 1 Score: 132 bits (331), Expect = 3.670e-34 Identity = 75/165 (45.45%), Postives = 97/165 (58.79%), Query Frame = 1 Query: 118 VSVRLARKGDIPSITKCNLESLPENYTPQFYDMHLMNWPQLALVAEHTPPSQGDPKVVGYVLGRVDSPQPASWSMSGMPRESSGHVTSLAVSDEFRRRGIADALMLTLHEKMRLHHRAACSKLHVRKSNTGAIKLYRDVMGYRLESVVHGYYEDGEDAYLMKCDL 612 ++ RLARK DIP I K NL +LPENY FY H+ WP+L LVAEH +VGYVLG+V++ +P GHVTSLAV RR GIA +L+ LH + + A LHVR SN+ A+KLY + +GY + ++ YY DGEDAY M+ D Sbjct: 1 ITFRLARKSDIPQIQKVNLATLPENYNNNFYINHMREWPELCLVAEH---------IVGYVLGKVET-RPL------------GHVTSLAVHSHARRLGIASSLLHQLHFHLNSCYNANSVGLHVRISNSAAVKLYIEHLGYDVADIIPMYYGDGEDAYFMRKDF 143
BLAST of mRNA_C-australica_Contig_980.1.2 vs. uniprot
Match: W7UA23_9STRA (Silencing group b protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UA23_9STRA) HSP 1 Score: 137 bits (346), Expect = 4.660e-33 Identity = 76/166 (45.78%), Postives = 95/166 (57.23%), Query Frame = 1 Query: 118 VSVRLARKGDIPSITKCNLESLPENYTPQFYDMHLMNWPQLALVAEHTPPSQGDPKVVGYVLGRVDSPQPASWSMSGMPRESSGHVTSLAVSDEFRRRGIADALMLTLHEKMRLHHRAACSKLHVRKSNTGAIKLYRDVMGYRLESVVHGYYEDGEDAYLMKCDLR 615 V +R AR+ DIP+I CNL++LPENY FY HL+ WP LALVAE P++ P +GHV+SLAV D+FRR GIA LM LH +M+ + CS LHVR SN GA KLY + +GYR+ V YY+DG DAY MK + R Sbjct: 137 VCIRTARREDIPAIEACNLKTLPENYPNAFYYNHLLQWPYLALVAERQTPARA----------------------GAYPGRKTGHVSSLAVLDDFRRLGIARELMEILHVQMKFRYGVDCSTLHVRCSNRGAQKLYLNSLGYRVVETVQKYYQDGADAYYMKLNFR 280 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_980.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_980.1.2 >prot_C-australica_Contig_980.1.2 ID=prot_C-australica_Contig_980.1.2|Name=mRNA_C-australica_Contig_980.1.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=313bp MLIKDPTRLLLLCILRSAAAMKHASVSVRLARKGDIPSITKCNLESLPENback to top mRNA from alignment at C-australica_Contig_980:81..2819- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_980.1.2 ID=mRNA_C-australica_Contig_980.1.2|Name=mRNA_C-australica_Contig_980.1.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2739bp|location=Sequence derived from alignment at C-australica_Contig_980:81..2819- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_980:81..2819- >mRNA_C-australica_Contig_980.1.2 ID=mRNA_C-australica_Contig_980.1.2|Name=mRNA_C-australica_Contig_980.1.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=939bp|location=Sequence derived from alignment at C-australica_Contig_980:81..2819- (Chrysoparadoxa australica CS_1217)back to top |