mRNA_C-australica_Contig_9791.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_9791.1.1 vs. uniprot
Match: A0A222E1X0_9RHOB (Glutathione-dependent formaldehyde-activating enzyme n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E1X0_9RHOB) HSP 1 Score: 167 bits (422), Expect = 1.300e-51 Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 1 Query: 1 HLACPYCMTWMFTRISAYDDFVTVRPTMFDDTTWFKPFIETMNREKLPWVHVPVEHSYEAWPPMDQFETLVANYAARG 234 H+ACPYCMTWMFTRI+AYDDFV VRPTMFDDTTWFKPFIETM REKLPWVHVPVEHSYEAWPPMDQFETLVA YA RG Sbjct: 74 HMACPYCMTWMFTRITAYDDFVNVRPTMFDDTTWFKPFIETMTREKLPWVHVPVEHSYEAWPPMDQFETLVAAYATRG 151
BLAST of mRNA_C-australica_Contig_9791.1.1 vs. uniprot
Match: A0A239CF07_9RHOB (Uncharacterized conserved protein n=1 Tax=Antarctobacter heliothermus TaxID=74033 RepID=A0A239CF07_9RHOB) HSP 1 Score: 147 bits (371), Expect = 7.550e-44 Identity = 60/78 (76.92%), Postives = 68/78 (87.18%), Query Frame = 1 Query: 1 HLACPYCMTWMFTRISAYDDFVTVRPTMFDDTTWFKPFIETMNREKLPWVHVPVEHSYEAWPPMDQFETLVANYAARG 234 H+ACPYCMTWMFTR++ +D FV VRPTMFDD WF PFIETM KLPWVHVP +HSY+AWPPMDQFETL+A+YAARG Sbjct: 74 HMACPYCMTWMFTRVTGFDGFVNVRPTMFDDMAWFAPFIETMTSAKLPWVHVPAQHSYDAWPPMDQFETLMADYAARG 151
BLAST of mRNA_C-australica_Contig_9791.1.1 vs. uniprot
Match: A0A0B3S8T7_9RHOB (Aldehyde-activating protein n=6 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A0B3S8T7_9RHOB) HSP 1 Score: 124 bits (312), Expect = 7.070e-35 Identity = 50/78 (64.10%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 1 HLACPYCMTWMFTRISAYDDFVTVRPTMFDDTTWFKPFIETMNREKLPWVHVPVEHSYEAWPPMDQFETLVANYAARG 234 H+ACP+CM+W+FTRI+ D FV VRPTMFDDT+WF PFIETM +LPW P HSY WPPMD+FE L+A Y A+G Sbjct: 74 HMACPHCMSWIFTRITGIDTFVNVRPTMFDDTSWFSPFIETMTSARLPWATTPARHSYVEWPPMDRFEELIAEYHAQG 151
BLAST of mRNA_C-australica_Contig_9791.1.1 vs. uniprot
Match: A0A238KAY3_9RHOB (Glutathione-dependent formaldehyde-activating enzyme n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238KAY3_9RHOB) HSP 1 Score: 124 bits (311), Expect = 1.000e-34 Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 1 Query: 1 HLACPYCMTWMFTRISAYDDFVTVRPTMFDDTTWFKPFIETMNREKLPWVHVPVEHSYEAWPPMDQFETLVANYAARG 234 H+ACPYCMTWMFTRI+ DDF+ VRPTMFDDT WF PF+ETM +L WV P HS+E WPP++ + L+A YAA+G Sbjct: 74 HMACPYCMTWMFTRITGIDDFLNVRPTMFDDTAWFVPFVETMTSARLHWVTTPARHSFETWPPVEDYAALMAEYAAQG 151
BLAST of mRNA_C-australica_Contig_9791.1.1 vs. uniprot
Match: UPI001C97E80F (GFA family protein n=2 Tax=Rhodobacterales TaxID=204455 RepID=UPI001C97E80F) HSP 1 Score: 122 bits (306), Expect = 5.760e-34 Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 1 HLACPYCMTWMFTRISAYDDFVTVRPTMFDDTTWFKPFIETMNREKLPWVHVPVEHSYEAWPPMDQFETLVANYAAR 231 H+ACP+CM+WMFTRI+ D F+ VRPTMFD+T+WF P+IETM KLPWV P HSY WPPMD+FE L+A Y A+ Sbjct: 74 HMACPHCMSWMFTRITGVDAFLNVRPTMFDETSWFVPYIETMTSAKLPWVTTPARHSYSEWPPMDRFEVLMAEYMAQ 150
BLAST of mRNA_C-australica_Contig_9791.1.1 vs. uniprot
Match: A0A7X3LU83_9HYPH (Aldehyde-activating protein n=1 Tax=Stappia sp. GBMRC 2046 TaxID=2692190 RepID=A0A7X3LU83_9HYPH) HSP 1 Score: 114 bits (286), Expect = 6.100e-31 Identity = 47/77 (61.04%), Postives = 57/77 (74.03%), Query Frame = 1 Query: 1 HLACPYCMTWMFTRISAYDDFVTVRPTMFDDTTWFKPFIETMNREKLPWVHVPVEHSYEAWPPMDQFETLVANYAAR 231 H CP CM+WMFTRI+ DDFV VRPTMFD+ W +PFIETM EKLPWV P HSY+A+PPM+ F+ L+ +A R Sbjct: 74 HFFCPSCMSWMFTRITGIDDFVNVRPTMFDEPEWTRPFIETMTAEKLPWVETPARHSYKAFPPMEDFQRLMREFAER 150
BLAST of mRNA_C-australica_Contig_9791.1.1 vs. uniprot
Match: A0A7W5Q2H8_9HYPH (CENP-V/GFA domain-containing protein n=4 Tax=Rhizobium TaxID=379 RepID=A0A7W5Q2H8_9HYPH) HSP 1 Score: 111 bits (277), Expect = 1.500e-29 Identity = 46/77 (59.74%), Postives = 53/77 (68.83%), Query Frame = 1 Query: 1 HLACPYCMTWMFTRISAYDDFVTVRPTMFDDTTWFKPFIETMNREKLPWVHVPVEHSYEAWPPMDQFETLVANYAAR 231 H CPYCMTWMFTR+ +D FV +RPTM DD WF PF+ET EKLPWV P HSY A P MD++E L+ Y AR Sbjct: 74 HYFCPYCMTWMFTRLEGFDWFVNLRPTMLDDPRWFTPFVETWTNEKLPWVTTPAVHSYAALPAMDEYEGLIKEYMAR 150
BLAST of mRNA_C-australica_Contig_9791.1.1 vs. uniprot
Match: UPI0015600DA1 (GFA family protein n=1 Tax=Hongsoonwoonella zoysiae TaxID=2821844 RepID=UPI0015600DA1) HSP 1 Score: 110 bits (276), Expect = 1.950e-29 Identity = 45/75 (60.00%), Postives = 54/75 (72.00%), Query Frame = 1 Query: 1 HLACPYCMTWMFTRISAYDDFVTVRPTMFDDTTWFKPFIETMNREKLPWVHVPVEHSYEAWPPMDQFETLVANYA 225 H CP CM+W+FTR+ DDFV VRPTMFD W +PFIETM EKLPWV P HSYEA+PPM+ F+ L+ +A Sbjct: 74 HFFCPSCMSWIFTRVMGMDDFVNVRPTMFDKPEWTRPFIETMTAEKLPWVETPARHSYEAFPPMEDFQKLMREFA 148
BLAST of mRNA_C-australica_Contig_9791.1.1 vs. uniprot
Match: A0A1H7BUF7_9RHOB (Uncharacterized conserved protein n=1 Tax=Cribrihabitans marinus TaxID=1227549 RepID=A0A1H7BUF7_9RHOB) HSP 1 Score: 110 bits (276), Expect = 2.060e-29 Identity = 46/77 (59.74%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 1 HLACPYCMTWMFTRISAYDDFVTVRPTMFDDTTWFKPFIETMNREKLPWVHVPVEHSYEAWPPMDQFETLVANYAAR 231 H CP CM+WMFTRI + D V VRPTMFDD W PFIETM R+KLPWV VP HS+E +P MD+F+ L A +A + Sbjct: 74 HYHCPDCMSWMFTRIESVDAIVNVRPTMFDDAAWVTPFIETMTRDKLPWVQVPARHSFEEFPSMDEFQALAAEFAGQ 150
BLAST of mRNA_C-australica_Contig_9791.1.1 vs. uniprot
Match: A0A366EBZ4_9HYPH (CENP-V/GFA domain-containing protein n=2 Tax=Pseudochrobactrum asaccharolyticum TaxID=354351 RepID=A0A366EBZ4_9HYPH) HSP 1 Score: 110 bits (276), Expect = 2.060e-29 Identity = 45/76 (59.21%), Postives = 53/76 (69.74%), Query Frame = 1 Query: 1 HLACPYCMTWMFTRISAYDDFVTVRPTMFDDTTWFKPFIETMNREKLPWVHVPVEHSYEAWPPMDQFETLVANYAA 228 H C YCMTWMFT I D FV VRP++FD+ WF PFIETM +EKLPW H P HSYE +PP + FE L+ +AA Sbjct: 74 HYFCAYCMTWMFTLIDGVDAFVNVRPSLFDERKWFVPFIETMTKEKLPWAHTPATHSYEGFPPFEDFEKLMTEFAA 149 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9791.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9791.1.1 >prot_C-australica_Contig_9791.1.1 ID=prot_C-australica_Contig_9791.1.1|Name=mRNA_C-australica_Contig_9791.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=72bp MTWMFTRISAYDDFVTVRPTMFDDTTWFKPFIETMNREKLPWVHVPVEHSback to top mRNA from alignment at C-australica_Contig_9791:621..857- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_9791.1.1 ID=mRNA_C-australica_Contig_9791.1.1|Name=mRNA_C-australica_Contig_9791.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=237bp|location=Sequence derived from alignment at C-australica_Contig_9791:621..857- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_9791:621..857- >mRNA_C-australica_Contig_9791.1.1 ID=mRNA_C-australica_Contig_9791.1.1|Name=mRNA_C-australica_Contig_9791.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=216bp|location=Sequence derived from alignment at C-australica_Contig_9791:621..857- (Chrysoparadoxa australica CS_1217)back to top |