mRNA_C-australica_Contig_978.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_978.1.1 vs. uniprot
Match: A0A1I4AMS3_9ACTN (Spore coat protein A n=2 Tax=Streptomyces TaxID=1883 RepID=A0A1I4AMS3_9ACTN) HSP 1 Score: 62.8 bits (151), Expect = 7.170e-10 Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 2 Query: 2 NNQEAGMTWVHDHLLGLTRMNVYAGLAHHWIIRDEHERKAFKKIRGNCALVSTGCGGCELEIVLQ 196 N+QEA W HDH LG+TR+NVYAGLA +++RD HE + R CG ELE+V+Q Sbjct: 211 NSQEAATLWYHDHTLGITRLNVYAGLAGFYLLRDSHELSLIEDHR-------LPCGPYELELVVQ 268
BLAST of mRNA_C-australica_Contig_978.1.1 vs. uniprot
Match: A0A7C1IFH9_9BACE (Spore coat protein CotA (Fragment) n=1 Tax=Bacteroides sp. TaxID=29523 RepID=A0A7C1IFH9_9BACE) HSP 1 Score: 62.0 bits (149), Expect = 1.250e-9 Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 2 Query: 2 NNQEAGMTWVHDHLLGLTRMNVYAGLAHHWIIRDEHERKAFKKIRGNCALVSTGCGGCELEIVLQ 196 NNQEA W HDH LG+TR+NVYAGLA + + D+HER K N AL G ++EIV+Q Sbjct: 194 NNQEAATLWYHDHALGITRLNVYAGLAGFYRLEDKHERDLVK----NAALPK---GSHDIEIVIQ 251
BLAST of mRNA_C-australica_Contig_978.1.1 vs. uniprot
Match: A0A1M4ZKY4_9THEO (Multicopper oxidase n=1 Tax=Caldanaerobius fijiensis DSM 17918 TaxID=1121256 RepID=A0A1M4ZKY4_9THEO) HSP 1 Score: 61.6 bits (148), Expect = 1.690e-9 Identity = 27/38 (71.05%), Postives = 31/38 (81.58%), Query Frame = 2 Query: 2 NNQEAGMTWVHDHLLGLTRMNVYAGLAHHWIIRDEHER 115 NNQEA M W HDH LG+TR+NVYAGLA + IRD+HER Sbjct: 109 NNQEAAMLWYHDHALGITRLNVYAGLAGLYYIRDKHER 146
BLAST of mRNA_C-australica_Contig_978.1.1 vs. uniprot
Match: A0A7C2LVQ1_9BACE (T9SS type A sorting domain-containing protein n=1 Tax=Bacteroides sp. TaxID=29523 RepID=A0A7C2LVQ1_9BACE) HSP 1 Score: 60.5 bits (145), Expect = 4.710e-9 Identity = 32/65 (49.23%), Postives = 40/65 (61.54%), Query Frame = 2 Query: 2 NNQEAGMTWVHDHLLGLTRMNVYAGLAHHWIIRDEHERKAFKKIRGNCALVSTGCGGCELEIVLQ 196 NNQEA W HDH LG+TR+NVYAGLA + + D+HER K N L G ++EIV+Q Sbjct: 194 NNQEAATLWYHDHALGITRLNVYAGLAGFYRLEDKHERDLVK----NAVLPK---GSHDIEIVIQ 251
BLAST of mRNA_C-australica_Contig_978.1.1 vs. uniprot
Match: UPI0011099CEA (multicopper oxidase n=1 Tax=Aquibacillus sediminis TaxID=2574734 RepID=UPI0011099CEA) HSP 1 Score: 59.7 bits (143), Expect = 8.700e-9 Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 2 Query: 2 NNQEAGMTWVHDHLLGLTRMNVYAGLAHHWIIRDEHER 115 NNQ A M W HDH +GLTR+N YAGLA +IIRD+HER Sbjct: 141 NNQRAAMLWYHDHAMGLTRLNNYAGLAGAYIIRDQHER 178
BLAST of mRNA_C-australica_Contig_978.1.1 vs. uniprot
Match: UPI001C662BD7 (multicopper oxidase domain-containing protein n=1 Tax=Kitasatospora acidiphila TaxID=2567942 RepID=UPI001C662BD7) HSP 1 Score: 58.5 bits (140), Expect = 2.220e-8 Identity = 33/65 (50.77%), Postives = 42/65 (64.62%), Query Frame = 2 Query: 2 NNQEAGMTWVHDHLLGLTRMNVYAGLAHHWIIRDEHERKAFKKIRGNCALVSTGCGGCELEIVLQ 196 N+QEA W HDH +GLTR+NVYAGLA +++RDE+E + K L+ TG E EIVLQ Sbjct: 202 NSQEAATLWYHDHAIGLTRLNVYAGLAGFYLLRDENEDELVKD-----HLLPTGPH--EREIVLQ 259
BLAST of mRNA_C-australica_Contig_978.1.1 vs. uniprot
Match: UPI00041A3834 (multicopper oxidase domain-containing protein n=1 Tax=Gulosibacter molinativorax TaxID=256821 RepID=UPI00041A3834) HSP 1 Score: 58.5 bits (140), Expect = 2.240e-8 Identity = 25/37 (67.57%), Postives = 29/37 (78.38%), Query Frame = 2 Query: 8 QEAGMTWVHDHLLGLTRMNVYAGLAHHWIIRDEHERK 118 Q A M W HDH++G+TR NVYAGLA WIIRDE ER+ Sbjct: 158 QRASMLWYHDHVMGVTRFNVYAGLAGLWIIRDERERE 194
BLAST of mRNA_C-australica_Contig_978.1.1 vs. uniprot
Match: UPI00126541AB (multicopper oxidase n=1 Tax=Marinobacter changyiensis TaxID=2604091 RepID=UPI00126541AB) HSP 1 Score: 58.5 bits (140), Expect = 2.240e-8 Identity = 25/37 (67.57%), Postives = 31/37 (83.78%), Query Frame = 2 Query: 2 NNQEAGMTWVHDHLLGLTRMNVYAGLAHHWIIRDEHE 112 N+QEAG W HDH LG+TR+NVYAGLA +IIRDE++ Sbjct: 204 NSQEAGTIWYHDHALGITRLNVYAGLAGFYIIRDEYD 240
BLAST of mRNA_C-australica_Contig_978.1.1 vs. uniprot
Match: UPI000A8F9195 (multicopper oxidase n=2 Tax=Bacillus TaxID=1386 RepID=UPI000A8F9195) HSP 1 Score: 57.8 bits (138), Expect = 4.150e-8 Identity = 27/65 (41.54%), Postives = 39/65 (60.00%), Query Frame = 2 Query: 2 NNQEAGMTWVHDHLLGLTRMNVYAGLAHHWIIRDEHERKAFKKIRGNCALVSTGCGGCELEIVLQ 196 NN +A W HDH LG+TR+N+YAGLA ++IRD ER L++ CG E+ +++Q Sbjct: 141 NNMQACTLWYHDHTLGITRLNIYAGLAGFYLIRDHRER-----------LLNLPCGQYEIPLIIQ 194
BLAST of mRNA_C-australica_Contig_978.1.1 vs. uniprot
Match: UPI001D5A6D0C (multicopper oxidase n=1 Tax=Peribacillus sp. Bi96 TaxID=2884273 RepID=UPI001D5A6D0C) HSP 1 Score: 57.8 bits (138), Expect = 4.150e-8 Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 2 Query: 2 NNQEAGMTWVHDHLLGLTRMNVYAGLAHHWIIRDEHERKAFKKIRGNCALVSTGCGGCELEIVLQ 196 NNQ++ W HDH LG+TR+NVYAGLA ++IRD+ ER +++ CG E+ +++Q Sbjct: 141 NNQKSVTQWYHDHTLGITRLNVYAGLAGFYLIRDKKER-----------VLNLPCGDYEIPLIIQ 194 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_978.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_978.1.1 >prot_C-australica_Contig_978.1.1 ID=prot_C-australica_Contig_978.1.1|Name=mRNA_C-australica_Contig_978.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=62bp MTWVHDHLLGLTRMNVYAGLAHHWIIRDEHERKAFKKIRGNCALVSTGCGback to top mRNA from alignment at C-australica_Contig_978:2381..3183+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_978.1.1 ID=mRNA_C-australica_Contig_978.1.1|Name=mRNA_C-australica_Contig_978.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=803bp|location=Sequence derived from alignment at C-australica_Contig_978:2381..3183+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_978:2381..3183+ >mRNA_C-australica_Contig_978.1.1 ID=mRNA_C-australica_Contig_978.1.1|Name=mRNA_C-australica_Contig_978.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=186bp|location=Sequence derived from alignment at C-australica_Contig_978:2381..3183+ (Chrysoparadoxa australica CS_1217)back to top |