mRNA_C-australica_Contig_977.2.8 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_977.2.8 vs. uniprot
Match: A0A835ZCT9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT9_9STRA) HSP 1 Score: 409 bits (1051), Expect = 1.520e-130 Identity = 262/669 (39.16%), Postives = 362/669 (54.11%), Query Frame = 3 Query: 69 AQT-YECGDLGALHAWLVDASQAYSWSPRFPQGCTCEKTGVSIQSCDIFDCACTCDTTAAGKCDYGCCCDTECSSEEVQRFEALESCAVL---PSNTLKAGCYDRSELAEVNPTFPLSATEGAEAALEALLCVQYDNSDSKGSFYPDLGTLTAAVFSEEVGRKEYDFTSHAQ-ITVPAGEA--EGDAIYDKGDRIPAA--SSDGSGGLRSAFGGFMPLPTPNQYGRQVIWIKGVYVLFETAVIGSRCNRVITDLEADCESQLNGVRVSSALHVAVAANGEASINPDAGSFVPISISAVTWRDWESGREEDFPTADYLECESYYFDGTTTNANN--CVIGGTGGNTIGASTITPSLYGCRSAVTAVCYTFIHNGAGSIVAANAELTVTDVP-----FGVGKFSFPHIAIVSLSNEYTVQFKATSEGAVPATSDSGNLVPRVRSGNPGYLWGLPVLAGEQGSVAEDALGYVTSLQRGMQVMASSDGTCD----SLTSATVQFGDDMMSCCALTLTRDEMKDLCQGRGAYISSGNSFTPAALATSAPESYL-GIYGNADPLDLGQWLKVDISSGTATNVWDEPTGTCSNMVTSLNWRILYTLVGSKVAPQNKIVAAEARYSKETLVW---WGSRAAQTVP--LCTTVTFVELVQDSAEQSPPAPPIGITVPW 1997 AQT Y C W+ + + Y+WS ++PQ CTCE + +C +F+C C CD TA GKCDY CCCD ECS++++ RF+AL++C PS+T+ CYD+ +L VNP PLSA + A+AAL+ LLCVQ DNS SKG FY D G L+AA S G K FTS+ IT AG EGDAIYD+GDRIPAA S+ G GL++A+GG+ P P P+ G AG +V +++SAVT++DW++G + DF TA Y C+++YFDG A C +G T + C +A+ +VCYT H+GAGSIVAA+A + VTDVP + +TVQF +T+ AV A+ GN RVRSG+PGYL G PVLAG ++ D V + QRG+Q++ + +A V+FG D ++CCAL LTR E+ LC G G +++ + TP AL+ AP L G YGNADPLD GQWL ++ + T+T W + GTCS + L WR L+ VG++ A Q ++VAA+ARY+ + W G AA+T +C++V+FV+ ++ +PP PPI +VPW Sbjct: 49 AQTVYTCPAKENAIPWVANPAAKYTWSAQYPQSCTCELNVDANSACPLFNCDCICDITA-GKCDYNCCCDQECSNDQIARFQALDTCLPEGPGPSSTVY--CYDKGQLVSVNPWGPLSAADTAQAALDNLLCVQKDNSPSKGQFYEDPGLLSAAAISTAEGTK---FTSYGTAITAAAGRGPTEGDAIYDQGDRIPAAFVSAGGGAGLQAAYGGYFPAPGPDSAG-------------------------------------------------------------AGDWVTVTVSAVTYQDWDTGAQSDF-TARY-NCDAFYFDGAAAAAGTGTCNLGXXXXXXXXXXTAPAA---CYNALLSVCYTITHDGAGSIVAADARIVVTDVPEAXXXXXXXXXXXXXXXXFAAQQSFTVQFASTA--AVTASDTQGNAAARVRSGSPGYLVGAPVLAG---LLSADGA-TVAAPQRGLQMLGGXXXXXXXXXXTAATAGVEFGYDALACCALALTRAELAQLCNGGGGAVAA-DGVTPLALSALAPAGTLIGSYGNADPLDPGQWLAAEVGTATSTATWSDALGTCSGVTAGLAWRFLWAPVGARAAAQARVVAADARYTTQDWAWRDGGGGDAAETQSFLVCSSVSFVQYGSEAVRYTPPPPPIAFSVPW 638
BLAST of mRNA_C-australica_Contig_977.2.8 vs. uniprot
Match: A0A7S3K434_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K434_9STRA) HSP 1 Score: 340 bits (873), Expect = 5.580e-104 Identity = 239/659 (36.27%), Postives = 356/659 (54.02%), Query Frame = 3 Query: 117 VDASQAYSWSPRFPQGCTCEKTGVSIQSCDIFDCACTCDTTAAGKCDYGCCCDTECSSEEVQRFEALESCAVLPSNTLK---AGCYDRSELAEVNPTFPLSATEGAEAALEALLCVQYDNSDSKGSFYPDLGTLTAA-VFSEEVGRKEYDFTSHAQITVPAGEAEGDAIYDKGDRIPAA------SSDG----SGGLRSAFGGFMPLPTPNQYGRQVIWIKGVYVLFETAVIGSRCNRVITDLEADCESQLNGVRVSSALHVAVAANGEASINPDAGSFVPISISAVTWR---DWESGREEDFPTADYLECESYYFDGTTTNANNCVIGGTGGNTIGASTITPSLYGCRSAVTAVCYTFIH--NGAGSIVAANAELTVTDVPFGVGKFSFPHIAIVSLSNEYTVQFKATSEGAVPATSDSGNLVPRVRSGNPGYLWGLPVLAGEQGSVAEDALGYVTSLQRGMQVMASSDGTCDSLTSATVQFGDDMMSCCALTLTRDEMKDLCQGRGAYISSGNSFTPAALATS-------APESYLGIYGNADPLDLGQWLKVDISSGTATNVWDEPTGTCSNMVTSLNWRILYTLVGSKVAPQNKIVAAEARYSKETLVWWGSRAAQ-----TVPLCTTVTFVELVQDSAEQ-SPPAPPIGITVPW 1997 VDA++AY+ S + P CTC KTG + C +F+C C CD TA G CDY CCCD +C+ +E +RFE L C LP + CY ++ ++N FP++A A+++++ LCV+YDNSD +G F+ D G + +F E G+K YD+ + D +D GD IPAA SS G S G AF G +PLP PN G I + V F T S C R+I +LEA+C S L R S++L++ NG AS + + ++P++I +V + D E F AD ++C++ Y GT+T+ +G S+ T + C +A+ AV Y +H +G SIV A A+L +TD+P I+ + Y+V F+ S+ A+ + N+V R RSGNPGYL+G P+LAG G+ D + L G+Q++A+S G D + +V FG D + C L L R E++D C G G Y S+G+ P S + Y+GI+GNADPLD+ QWL++ + + T VW E TG C + +TS+N+R L++ VG+K PQ KIVAA +SKE + S + + P+ T TF+ +D+A+ +PPAPP+ ++VP+ Sbjct: 40 VDANRAYTLSRKMPPSCTCRKTGDTDDECTMFECTCICDLTA-GACDYNCCCDDDCTQDEKERFENLNDC--LPEGPVDDEITKCYTTKQVDKINAKFPMTAKGTAKSSVDRALCVRYDNSDLRGEFFDDPGYPDSLDIFDESQGQKNYDYPFWIEDEEIYSS---DQSFDAGDFIPAAFAVTDLSSGGGIPLSDGYIDAFQGILPLPVPNNNG---ICSEAASVKFATPQ-SSTCIRLIQNLEAECASTLGSFRWSASLYLGT--NGAAS-SSGSTDWIPVTIRSVKYTNFYDTTQTEHETFNDAD-VDCDATY--GTSTSC------------LGTSSATANET-CFNALVAVHYDIVHQSDGINSIVEAFADLLLTDIPQSANNDD----NIIIIRQYYSVGFR--SQAAIARSQ--ANIVNRTRSGNPGYLFGRPLLAGANGN--NDV---IRPLADGLQLVAAS-GHGDCHDTISVPFGADTRTGCILRLNRTELRDFCNGVGDYSSTGDPGVPRYFNVSDIFGNPTIYDEYIGIFGNADPLDISQWLQITVKAPQNTAVWRERTGVCESAITSMNFRFLWSYVGAKDNPQPKIVAARLDFSKEDFAFTLSSTSALSQKISFPITFTATFIHYDEDAAQPYTPPAPPMAVSVPY 655
BLAST of mRNA_C-australica_Contig_977.2.8 vs. uniprot
Match: D7FSH4_ECTSI (DUF1619 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH4_ECTSI) HSP 1 Score: 333 bits (854), Expect = 2.060e-102 Identity = 197/553 (35.62%), Postives = 289/553 (52.26%), Query Frame = 3 Query: 369 RSELAEVNPTFPLSATEGAEAALEALLCVQYDNSDSKGSFYPDLGTLTAAVFSEEVGRKEYDFTSHAQITVPAGEAEGDAIYDKGDRIPAASSDGSGGLRSAFGGFMPLPTPNQYGRQVIWIKGVYVLFETAVIGSRCNRVITDLEADCESQLNGVRVSSALHVAVAANGEASINPDAGSFVPISISAVTWRDWESGREEDFPTADYLECESYYFDG----TTTNANNCVIGGTGGNTIGASTITPSLYGCRSAVTAVCYTFIHNGAGSIVAANAELTVTDVPFGVGKFSFPHIAIVSLSNEYTVQFKATSEGAVPATSDSGNLVPRVRSGNPGYLWGLPVLAGEQGSVAEDALGYV----TSLQRGMQVMASSDGTCDSLTSATVQFGDDMMSCCALTLTRDEMKDLCQGRGAYISSGNSFTPAALA-TSAPESYLGIYGNADPLDLGQWLKVDISSGTATNVWDEPTGTCSNMVTSLNWRILYTLVGSKVAPQNKIVAAEARYSKETLVWWGSRA-AQTVPLCTTVTFVELVQDSAEQSPPAPPIGITVPW 1997 + L ++NP++PL+ A+ A++ LLCVQYDNS SKG F+ D GTL ++F + G E+ + + + +G E D+ +D GDRIPAA GG +AFGGF P + IS+VTWRDW++G+E DF + C YY+DG T T + C++GG G T+ ++T GC++A+ +VCYT H+G G + A +A + +TD+P G SF ++ S E+ + + S + + D GNLV R RSGNPGYL GLPVLAG S +D Y+ ++ G+++MA CD + + V+F D + CC L+LTR+ + + C G G ++ FTP A TS+ YLGIYGNADPLD+ QW+++ ++S T WD+ +G CS+MV++L +R+LYT VGSK PQ+KIV+A ARY K +W A Q +C TV+F Q++ +PP+PP+ TVPW Sbjct: 69 QDHLDKINPSYPLTGGGAAQGAVDGLLCVQYDNSASKGEFFEDPGTLPISIFGDS-GASEFSYHDNLAASAASGATETDSFFDTGDRIPAAFLADDGGTVAAFGGFFP---------------------------------------------------------------------------VEISSVTWRDWDTGQETDFMD---VNCGVYYYDGAAVDTVTTNSACILGGGTGETVASATDVSD--GCKNALASVCYTITHDGEGGVSAVSAAVVLTDIPPGPNGGSFSAVSPQQFSVEFRLDETSDSFADMTRSQDLGNLVERGRSGNPGYLPGLPVLAGRLESFDDDE--YIAPGGSNGGGGLELMAGEGRGCDDVGTTPVEFAYDGVGCCVLSLTREALAEHCTGSGQHVDPETGFTPLAFGNTSSTVEYLGIYGNADPLDVSQWVELPLASSADTASWDDESGMCSSMVSTLEYRVLYTAVGSKANPQSKIVSAAARYGKSDWIWREEFADEQNFLVCNTVSFKMYEQETLRYTPPSPPVAFTVPW 538
BLAST of mRNA_C-australica_Contig_977.2.8 vs. uniprot
Match: A0A7S1TPI6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPI6_9STRA) HSP 1 Score: 319 bits (817), Expect = 5.030e-96 Identity = 222/656 (33.84%), Postives = 335/656 (51.07%), Query Frame = 3 Query: 111 WLVDASQAYSWSPRFPQGCTCEKTGVSIQSCDIFDCACTCDTTAAGKCDYGCCCDTECSSEEVQRFEALESCAVL-PSNTLKAGCYDRSELAEVNPTFPLSATEGAEAALEALLCVQYDNSDSKGSFYPDLGTLTAAVFSEEVGRKEYDFTSHAQITVPAGEAEGDAIYDKGD-----RIPAASSDGSGGLRSAFGGFMPLPTPNQYGRQVIWIKGVYVLFETAVIGSRCNRVITDLEADCES--QLNGVRVSSALHVAVAANGEASINPDAGSFVPISISAVTWRDWESGREED---FPTADYLECESYYFD-GTTTNANNCVIGGTGGNTIGASTITPSLYGCRSAVTAVCYTFIHNGAGSIVAANAELTVTDVPFGVGKFSFPHIAIVSLSNEYTVQFKATSE--GAVPATSDSGNLVPRVRSGNPGYLWGLPVLAGEQGSVAEDALGYVTSLQRGMQVMAS-------SDGTCDSLTSAT-VQFGDDMMSCCALTLTRDEMKDLCQGRGAYISSGNSFTPAALATSAPESYLGIYGNADPLDLGQWLKVDISSGTATNVWDEPTGTCSNMVTSLNWRILYTLVGSKVAPQNKIVAAEARYSKETLVWWGSRAA-----QTVPLCTTVTFVELVQDSAEQSPPAPPIGITVPW 1997 + +D + Y P CTC+++ V SC F+C CTCD A G CDY CCCDTECS+E++ RFE L +C P++++ C +LAE+NP+FPL + A+ +L+ +LCVQ DNS+ KG F+ D G+ +A+VF + G K+Y + T D YD G+ IP +SDG A+GG + +PT ++ G G Y E + C +V DL C++ L+ ++ L++ + + D +V + I T+ +W +G + AD C S+Y G TT C I A+ +T + CR AV ++CYT H+ A +IV A+A + +TD+P A+ + ++ Y V+ + T E + T+ N++ R RSGNPGY++G+PVL+G VA + + + G+ + S +D D T V FG D S C L+LT E++D C G +SS P L T+ +SY+G YGN+DPLD W+ V+ +S VW T TC+++VT +++RIL+ G+ Q KI+ E YS ET+ W A Q + L +T TFVE V SAE +PPAPPI +VP+ Sbjct: 35 YAMDTALFYQEDSLLPPSCTCQESFVGYSSCTKFECECTCDLNA-GMCDYNCCCDTECSTEQIARFEELGACLPEGPADSVITECASTEDLAEINPSFPLRVKDTADQSLDQMLCVQTDNSELKGEFFADPGSPSASVFDSDDGSKDYSYEPTTASTTSI-----DDTYDLGETILAGHIPNGTSDG---FYRAWGGHLSIPTADESGVCNPLSFGKYE--EPVYEPNSCIQVFDDLADACDNGGALDLRTLARDLYIGTTPESALTASAD---YVRVEIDDYTFEEWGTGTDVTDAAITVADVQSCGSFYTSAGDTTGPAGCAIT--------ANAVTTAEAACRYAVKSICYTITHD-ATAIVNASATVVLTDIPT---------TAVDATTSMYYVEQETTLEFGSTLAVTTSQNNVIARTRSGNPGYIFGMPVLSGYL--VATETDTGIRARVPGLTLPGSPFSLNCPADADVDDADFRTQVNFGIDARSGCKLSLTLAELEDFCDGTSTLVSSN---VPINLETN--DSYVGEYGNSDPLDRSAWVSVEATSTVTAPVWSSTTQTCTDLVTGVHYRILWAYTGTTENRQPKIITVEKVYSTETVQWLRPPGAPSDVEQPLFLTSTATFVEYVTSSAEYTPPAPPIIFSVPY 651
BLAST of mRNA_C-australica_Contig_977.2.8 vs. uniprot
Match: A0A7S3M187_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M187_9STRA) HSP 1 Score: 213 bits (541), Expect = 9.940e-57 Identity = 191/608 (31.41%), Postives = 282/608 (46.38%), Query Frame = 3 Query: 291 EEVQRFEALESCAVLP-SNTLKAGCYDRSELAEVNPTFPLSATEGAEAALEALLCVQYDNSDSKGSFYPDLGTLTAAVFSEEVGRKEYDFTSHAQITVPAGEAEGDAIYDKGDRIPAASSDGSGGLRSAFGGFMPLPTPNQYGRQVIWIKGVYVLFETAVIGSRCNRVITD----LEADCESQLNGVRVSSALHVAVAANGEASI-NPDAGSFVPISISAVTWRDWESGREEDFPTADYLE---CESYYFDGTTTNANNCVIGGTGGNTIGASTITPSLYGCRSAVTAVCYTFIHNGA--GSIVAANAELTVTDVPFGVGKFSFPHIAIVSLSNEYTVQFKATSEGAVPATSDSGNLVPRVRSGNPGYLWGLPVLAGE-QGSVAEDALGYVTSLQRGMQVMASSDGT------CDSLTS------ATVQFGDDMMSCCALTLTRDEMKDLC-QGRGA---YISSGNSFTPAALATSAP------ESYLGIYGNADPLDLGQWLKVDISSGTATNVWDEPTGTCSNMVTSLNWRILYTLVGSKVAPQNKIVAAEARYSKETLVWW----GSRAAQTVPLCTTVTFV-ELVQDSAEQSPPAPPIGITVPW 1997 ++ RF++L +C T CY +EL VNP P+ A A+ LCV N+ K FY +++VFS + G+K Y + + + + DA YD+ D I A ++ S G S G++ LP P+ G+ YV FE C R ++ A CE Q + R + L++A AAN AS N S VPI++SAV + D+ +G D TA Y + Y +G T +A V G + T P+ C+ V AV YT H +I + A +T++DVP + A ++ T + S TSD+GNL+ R RSGNPGYL G PVL G+ G+V + + T + M S++ T C + + A VQFG D+ S C+++L R + DLC G GA + + T + + T P + Y+GIYG+ADPLD QW + + + T W+ T TCSNM L + L GS+ PQNKI+++ A + V + + QT PL TV+FV + D + PAPP+ VP+ Sbjct: 1 DQKSRFDSLNACESEGYEETSIQHCYSSNELYGVNPREPMGGQATANEAVSQALCVVQKNTAIKEEFYNVADVESSSVFSTDEGQKTYSYLAPTETVLAV-----DANYDQNDTIGAFTNSASAGFASNGPGYLQLPQPDYTGQ---CNDQNYVSFENNQAPQSCARTLSGDVNTFMAQCEEQFSVSRYVTNLYIATAANSLASNGNTPLASTVPITLSAVFFEDYLTGTVTDV-TATYTANGCTTTAYLNGATPSA---VCGFSAAQTETELLTYPAF--CQGLVKAVYYTVTHATTTDAAITSVTATVTLSDVPMELS-------AAAPITVTQTFGSRFYSSDPTEQTSDNGNLIRRERSGNPGYLLGKPVLYGQLSGTVVNEYVAGFT-VPTAMAAYDSANPTAFGKSVCPAAATVAGGSEAAVQFGYDLTSGCSVSLNRSALIDLCCAGSGACSGVVGASYESTYSDVTTGLPWFYAFTQGYVGIYGDADPLDAAQWSSMTYNVPSDTRTWNALTSTCSNMFNGLEIQFLVAATGSRTNPQNKIISSVATVTTGDWVMKVPVDDAVSTQTFPLAITVSFVFQDESDLRDYIVPAPPVLFKVPF 586
BLAST of mRNA_C-australica_Contig_977.2.8 vs. uniprot
Match: F0YJJ7_AURAN (DUF1619 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJJ7_AURAN) HSP 1 Score: 207 bits (528), Expect = 2.220e-54 Identity = 184/679 (27.10%), Postives = 281/679 (41.38%), Query Frame = 3 Query: 126 SQAYSWSPRFPQGCTCEKTGVSIQSCDIFDCACTCDTTAAGKCDYGCCCDTECSSEEVQRFEALESCAVLPSNTLK-AGCYDRSELAEVNPTFPLSATEGAEAALEALLCVQYDNSDSKGSFYPDLGTLTAAVFSEEVGRKEYDFTSHAQITVPAGEAEGDAIYDKGDRIPAASS--------------DGSGG----LRSAFGGFMPLPTPNQYGRQVIWIKGVYVLFETAVIGSRCNRVIT--DLEADCESQLNGVRVSSALHVAVAANGEASINPDAGSFVPISISAVTWRDWESGREEDFPTADYLECESYYFDGTTTNANNCVIG-------------------GTGGNT-IGASTITPSLYGCRSAVTAVCYTFIH--NGAGSIVAANAELTVTDVPFGVGKFSFPHIAIVSLSNEYTVQ---FKATSEGAVPATSDSGNLVPRVRSGNPGYLWGLPVLAGEQGSVAEDALGYVTSLQRGMQVMASSDGTCDSLTSATVQ--FGDDMMSCCALTLTRDEMKDLCQGRGA--YISSGNSFT--PAALATSAPESYLGIYGNADPLDLGQWLKVDISSGTATNVWDEPTGTCSNMVTSLNWRILYTLVGSKVAPQNKIVAAEARYSKETLVWWGSR---AAQTVPLCTTVTFVELVQDSAEQSPPAPPIGITVPW 1997 + AY + + P GC C KTG + C IF+C C CD TA G+CD CCCD ECS + RF+ LE+C L+ CY EL +NP FP+SA A+ +++ +LCV+YDNS+ +G FY D +++ +E + EYD++ + + D +D GD I A S D G L AF G +PLP G + + + +T +RC R + L C + V +HV AS + ++ + ++ WRD+ +G E + T++ CE++Y D T AN + T N A P CR+A+ +CYT IH +G +I+AA +L +TDVP G ++ L +Y+V+ S A ++ + R DG C + V FG M + C L R E++D C Y + N F + +GI+GNADPLD+ QW K+D+ + RI++ VGS+ PQ K++AA +SK + + A + TT TF++ A+ SPP+PP+ I+VP+ Sbjct: 65 NSAYFANQKMPPGCDCRKTGDADSECYIFECTCICDLTA-GRCDPNCCCDAECSDSQRNRFDVLETCLPEGGTDLQITKCYSTKELDRINPKFPMSARGIAKGSVDRMLCVRYDNSNYRGQFYEDPDSVS----DQEFTQNEYDYSHWKKSLLADAVYAIDNHFDSGDLIGVAFSVEEARSQLKNVPIYDAEEGAERKLVDAFSGKLPLPMATHLGECSDFGQARFATPKT----TRCVRAFSASQLSQACNGNVLDVGRFLRIHV----GSYASASTAGADWIDVVPRSIIWRDFHTG-EIVYGTSNGT-CETFY-DARLTQANPAISSLAPSQQPVTLPAALTLNESSTASNCGFQAGLARPEPPACRNALVGICYTLIHRTSGTNNIIAAFLDLVITDVPLEAGNDD----GLIVLQQDYSVRKSGLHLRSSSACRGNCENNSRTKR-------------------------------------------DGLCTISNNYMVDLPFGVSMRTGCLLQFNRSELRDFCVYTRPLQYFNVSNIFDVDTVKIRDDYASFRVGIFGNADPLDVSQWRKIDVQAAA---------------------RIVWAYVGSRTNPQAKVLAARVDFSKSDIRHDFNHINTARTEFSIATTATFIQRANKPADYSPPSPPVAISVPY 659
BLAST of mRNA_C-australica_Contig_977.2.8 vs. uniprot
Match: A0A482T5G4_9ARCH (DUF1619 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T5G4_9ARCH) HSP 1 Score: 181 bits (459), Expect = 1.890e-45 Identity = 171/604 (28.31%), Postives = 274/604 (45.36%), Query Frame = 3 Query: 294 EVQRFEALESCAV--LPSNTLKAGCYDRSELAEVNPTFPLSATEGAEAALEALLCVQYDNSDSKGSFYPDLGTLTAAVFSEEVGRKEYDFTSHAQITVPAGEAEGDAIYDKGDRIPAASSDGSGGLRSAFGGFMPLPTPNQYGRQVIWIKGVYVLFETAVIGSRCNRVITDLEADCESQLNG---VRVSSALHVAVAANGEAS-INPDAGSFVPISISAVTWRDWESGREEDFPTADYL--ECES-YYFDGTTTNANNCVIGGTGGNTIGASTITPSLYGCRSAVTAVCYTFIHNGA--GSIVAANAELTVTDVPF-GVGKFSFPHIAIVSLSNEYTVQFKATSEGAVPATSDSGNLVPRVRSGNPGYLWGLPVLAGEQGSVAEDALGYVTSLQRGMQV--MASSDGTCDS----LTSATVQFGDDMMSCCALTLTRDEMKDLC--------QGRGAYISSGNSFT-----PAALATSAPESYLGIYGNADPLDLGQWLKVDISSGTATNVWDEPTGTCSNMVTSLNWRILYTLVGSKVAPQNKIVAAEARYSKETLVW----WGSRAAQTVPLCTTVTFVELVQDSAE-QSPPAPPIGITVPW 1997 ++ RFE+L SC ++++ CY SEL VNP P+ A + LCV+ N + +Y D ++ VF+++ G+K Y + + Q D+ YD+ D IPA +G L S G++ +P + G ++ FE V C R ++ E D Q RV++ L +A N AS + + +SI+++ + D+ + D+ C + Y FD +T AN C T A+ +T L C +A+ V Y H + S+ + + + +TD+P+ G G + + V F + S AT+ VPR RSGNPGYL GLPVL G + + + SL G+ + + TC + L+S ++ FG D ++ C + LTR++++ C G GA + + + +T P L +A Y+G+YG+ADPLD+ QWL + +S W+E T TCSN+ L + L G ++ PQ KIVAA A+ V+ QT L + V+FV + PPAPP+ +P+ Sbjct: 4 QISRFESLNSCTFEGYEPDSIQY-CYSSSELYGVNPKAPMGGQPSANEGVSRALCVEKKNYAFRDEYYLDADVQSSQVFNQKQGQKSYSYLMNFQTETSVETV--DSNYDQNDTIPAFILLNTGELVSNGPGYLQIPVGDMSGD---CNDKMFAQFERFVPVQPCRRTLSADEQDFIMQCGDWSVSRVATDLFLAKLPNNLASNAAASTSNTITVSIASMEYEDYYTKERTAISLDDWTGPNCNTGYVFDTSTFVANPCFFAPTASQ---AALLTNPL--CNNALKEVEYAVSHGNSPPSSLSSVSVRIVLTDLPYTGEGG---------QVDQYWGVNFLSNSS----ATTSPQTTVPRQRSGNPGYLQGLPVLFGYRDNT------IINSLVDGLSISSLTPPQSTCPTSIADLSSLSILFGYDTITGCTVPLTREDLRSFCCTGAGGSCLGGGASLITPSPYTSDQGLPVFLNFTA--GYVGMYGDADPLDVSQWLSLSLSLPPDERRWNEKTSTCSNVYAGLTIQFLVAPSGERLNPQQKIVAAAAQVVTGDWVFSLPPTDQIRRQTFTLQSAVSFVFQEESKLRGYEPPAPPVLFKMPY 575
BLAST of mRNA_C-australica_Contig_977.2.8 vs. uniprot
Match: A0A7S2C1U0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1U0_9STRA) HSP 1 Score: 165 bits (417), Expect = 7.450e-42 Identity = 116/319 (36.36%), Postives = 177/319 (55.49%), Query Frame = 3 Query: 1110 RSAVTAVCYTFIHNGAGSIVAANAELTVTDVPFGVGKFSFPHIAIVSLSNEYTVQFKATSEGAVPATSDS--GNLVPRVRSGNPGYLWGLPVLAGEQGSVAEDALGYVTSLQRGMQVMASS-DGTCDSLTSA-----TVQFGDDMMSCCALTLTRDEMKDLCQGRGA--YI--------SSGNS-FTPAALATSAPESYLGIYGNADPLDLGQWLKVDISSGTATNVWDEPTGTCSNMVTSLNWRILYTLVGSKVAPQNKIVAAEARYSKETLVW---WGSRAAQTVPLCTTVTFVELV-QDSAEQSPPAPPIGITVPW 1997 R A++ + +T + N I A A++ +TD+ S P ++ S E+ +++ A S + GN V RSGNPGY+ GLP+L + A + +T+ GM+V+ S+ DGTC ++T + T+ FG DMM+ C LTLT++E+ +C G YI S+G S + P L + ++++G++GNADPLD QWL++DI + T WDE T TCS M+TSLN++ L VGS PQ K+++A A Y +E +V+ G Q V L TTV+F+ +S +PPAPPI T+P+ Sbjct: 1 RRALSKITWTVVANSKNQISAVAADIVLTDL-VASNVSSVPTVS----SQEFNIEYVAASFDMSYGVNAKAYGNAVNMSRSGNPGYITGLPLLGATRDYAAGET-DTMTARVPGMEVIGSATDGTCPNVTRSGLDTQTINFGQDMMTGCMLTLTKEELATMCDGTDTSPYITLNERVLASTGKSLYVPTFL--NITDTHVGMFGNADPLDTTQWLELDIGT-TDEGTWDEATMTCSPMITSLNYKFLVAYVGSVDNPQAKVISASASYGREPVVFSAEGGEGVTQNVMLSTTVSFITYKGTESKAYAPPAPPILFTMPY 310
BLAST of mRNA_C-australica_Contig_977.2.8 vs. uniprot
Match: B8C570_THAPS (DUF1619 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C570_THAPS) HSP 1 Score: 170 bits (430), Expect = 8.540e-42 Identity = 169/598 (28.26%), Postives = 256/598 (42.81%), Query Frame = 3 Query: 114 LVDASQAYSWSPRFPQGCTCEKTGV-SIQSCDIFDCACTCDTTAAGKCDYGCCCDTECSSEEVQRF-EALESCAVLPSNTLKAGCYD-RSELAEVNPTFPLSATEGAEAALEALLCVQYDNSDSKGSFYPDLGTLTAAVFSEEVGRKEYDFTSHAQITVPAGEAEGDAIYDKGDRIPAASSDGSGGLRSAFGG-FMPLPTPNQYGRQVIWIKGVYVLFETAVIG----SRCNRVITDLEADCESQLNGVRVSSALHVAVAANGEASINPDAGSFVPISISAVTWRDWESGREEDFPTADYLECESYYFDGTTTNANNCVIGGTGGNTIGASTITPSLYGCRSAVTAVCYTFIHNGAGSIVAANAELTVTDVPFGVGKFSFPHIAIVSLSNEYTVQFKATSEGAVPATSDSGNLVPRVRSGNPGYLWGLPVLAGEQGSVAEDALGYVTSLQRGMQVMASS-DGTCDSLT--SATVQFGDDMMSCCALTLTRDEMKDLCQG------RGAYISSGNSFT-PAALATSAPESYLGIYGNADPLDLGQWLKVDISS-----GTATNVWDEPTGTCSNMVTSLNWRILYTLVGSKVAPQNKIV 1838 L+ S + S S + P GCTC+++ V Q C+ FDC C CD TA G CD CCCD EC E+ F L+ +V P + L C + S+L ++N +P ++ E L L C++ DNS KG+F+ D G A+ + T H+ +G++ Y GD I A L++AFGG + LPT + G V TA G S C R DL CE Q + R S L V + G + P VPISI + ++D D + ++ S C +A+ ++ Y +N SI+ + E+ DV K + + ++F + + NL+ R RSGNPGY+ G P L G + +A +V + + G VM + G C S + +TV F D+ C ++TR +K+ C ISS + P L T+ + +LGI+GNADPLD+ QW +++ + + W + C M + L + IL+T VG+ PQ KI+ Sbjct: 29 LLVVSFSLSTSSQTPPGCTCKQSDVIDGQQCEQFDCHCKCDLTA-GVCDINCCCDPECHLAEIASFGSCLDEGSVSPISKL---CVEGASQLEDINLKYPFRISDSPEDQLHGLTCIEKDNSAVKGNFFQDQGYPRASQAFAPGSKVAKPLTFHSYKQT-SGDSSSTGEYKLGDGITAYKLSEQQ-LKTAFGGGLLTLPTSDDGGN--------CVELNTASFGKDEASSCLRSTDDLAISCEDQFSTSRYISNLFVEKS-KGTVLLGPS-DDAVPISIKS--FKDSSGNVSTDIDNIPH-----------------------------PASWDASFATCVNALKSLKYYVTYNQT-SILDVSVEVETIDVAQEAPK----------VKQSFAIEFVPIEVESSQRSYAKNNLITRTRSGNPGYIHGEPTL-GARSHDGNEAASHVIAQKAGFTVMDTGVGGQCSSSSHSGSTVGFAKDVFVGCTQSMTRQTLKEFCTADVHPMLSSRQISSTEQYVFPKWLETN--QEFLGIFGNADPLDIRQWARIESALDQPRFAVKSRSWIDAESRCVGMPSRLRFEILWTYVGNVDNPQAKIL 565
BLAST of mRNA_C-australica_Contig_977.2.8 vs. uniprot
Match: A0A3P3YNS3_PLABS (DUF1619 domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YNS3_PLABS) HSP 1 Score: 170 bits (430), Expect = 1.230e-41 Identity = 174/599 (29.05%), Postives = 267/599 (44.57%), Query Frame = 3 Query: 222 CTCDTTAAGKCDYGCCCDTECSSEEVQRFEALESCAVLPSNTLKAG---CYDRSELAEVNPTFPLSATEGAEAALEALLCVQYDNSDSKGSFYPDL-GTLTAAVFSEEVGRKEYDFTSHAQITVPAGEAEGDAIYDKGDRIPAASSDGSGGLRSAFGGFMPLPTPNQYGRQVIWIKGVYVLFETAVIGSRCNRVITDLEADCESQLNGVRVSSALHVAVAANGEASINPDAGS-FVPISISAVTWRDWESGREEDFPTADYLECESYYFDGTTTNANNCVIGGTGGNTIGASTITPSLYGCRSAVTAVCYTFIHNGAGSIVAANAELTVTDV-PFGVGKFSFPHIAIVSLSNEYTVQFKATSEGAVPATSDSGNLVPRVRSGNPGYLWGLPVLAGEQGSVAEDALGYVTSLQRGMQVMASSDGTCDSLTSA---TVQFGDDMMSCCALTLTRDEMKDLCQGRGAYISSGNSFTPAALATSAPESYLGIYGNADPLDLGQWLKVDISSGTATNVWDEPTGTCSNMVTSLNWRILYTLVGSKVAPQNKIVAAEARYSKET----LVWWGSRAAQTVPLCTTVTFVEL-VQDSAEQSPPAPP 1976 CTCD T + CD+GC CD +C++ E F + V PS ++A C D S L VN LS T ++ L+CVQ N+ S G+FY +T++ F Y F+ + P Y G I A S SGGL S GF+ +P P+ + LF A +RC R +T L + C + LN ++AL + A + +PD+ S ++PI+++ T+ D +G P+ + T TP C++AV + YTF +N AG I A+A +TV+ V P AIV +Y+ F + TS +G R +SGNPGY+ G PVLAG+ +++ + V S++G C SL A V FG+ + S CA+TLT ++ C RG LAT AP Y+G +G++ ++ W++VD+ + + W +C+ +V++++ L VGS + PQ KIV+A Y +T V + AQT + + +F+ +A PPAPP Sbjct: 57 CTCDLTYS-VCDFGCSCDPDCTTAEQALFSS-----VTPSGAVQASVPMCVD-SNLVAVNKRASLSYT-----FVDNLICVQSVNNPSLGTFYTSPPSAVTSSQFDALESATPYLFSKASPTATPVPATSN---YLVGSPIVAGRSV-SGGLVSQGYGFLSIPGPSATFE---CDDAQFALFGQAT-QTRCQRTLTSLASSCTTYLNPATYTTALQIGQVA----AASPDSVSQYIPITVTETTFVDPNTGAPTTLPS------------------------------MPVPTYTPGSCQCQNAVAGIAYTFTYNQAGQITQASAAVTVSTVTPSSTCSSGDASGAIVQ---QYSTSFTRSW------TSATG----RAKSGNPGYIVGKPVLAGQLQTISASQQAISQQISGLTLVGRSANGQC-SLADADRIVVGFGESLHSTCAITLTSAQLAARCASRGVL---------DYLATLAP-LYVGRWGSSTYTNVDDWIQVDLGAPATSYTWSASQLSCTGIVSAMHVEFLTADVGSVLNPQTKIVSARVVYGTDTWRMRTVTGAAGEAQTFQVTVSASFLAYPASGNATLVPPAPP 577 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_977.2.8 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_977.2.8 >prot_C-australica_Contig_977.2.8 ID=prot_C-australica_Contig_977.2.8|Name=mRNA_C-australica_Contig_977.2.8|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=665bp MWRAKEILIVLGLLGKQWQGIAQTYECGDLGALHAWLVDASQAYSWSPRFback to top mRNA from alignment at C-australica_Contig_977:2555..6859+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_977.2.8 ID=mRNA_C-australica_Contig_977.2.8|Name=mRNA_C-australica_Contig_977.2.8|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4305bp|location=Sequence derived from alignment at C-australica_Contig_977:2555..6859+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_977:2555..6859+ >mRNA_C-australica_Contig_977.2.8 ID=mRNA_C-australica_Contig_977.2.8|Name=mRNA_C-australica_Contig_977.2.8|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1995bp|location=Sequence derived from alignment at C-australica_Contig_977:2555..6859+ (Chrysoparadoxa australica CS_1217)back to top |