mRNA_C-australica_Contig_9741.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_9741.1.1
Unique NamemRNA_C-australica_Contig_9741.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_9741.1.1 vs. uniprot
Match: A0A3C0NT51_9PROT (Sodium:solute symporter n=3 Tax=Methylophilaceae bacterium TaxID=2030816 RepID=A0A3C0NT51_9PROT)

HSP 1 Score: 395 bits (1016), Expect = 1.800e-133
Identity = 203/286 (70.98%), Postives = 243/286 (84.97%), Query Frame = 1
Query:    1 IIICVGMLYIGNEVSGMVGGVATVVEHADKAGLFNFWPSANSAEVIAFIAAAITMMFGSMPQQDVFQRVQSSSTIFTAVWATVLGGVLYFLFAFVPMFLAYSATLIDPEKVKQIMDIDYQLVLPNLVLNHAPLLAQVLFFGALLSAIKSSASATLLAPSVTFTENILRPFMPAMDEVKLLKVMRLVTLSFAVIVTIYAMYSESSIFKMVEDAYQVTLVTAFVPLVCGVYWKRATNQGALFAIGFGLFTWLGVMLFGAEEPYVPAHLAGLVASIIGMIVGTLLPQRI 858
            +IIC+GML IGNEVSGM GGV+ V++HA  AG F+FWP+A+  E+IAF AA +TMMFGSMPQQDVFQRVQSS TI  AVW +VLGG LYF+FAFVPMFLAYSATLIDP+ V  ++D+D QL+LP LVL HAPL AQV+FFGALLSAIKS ASATLLAPSVTFTENIL+P MP M + +LLK MR+VTL F V+VT+YA+ S+ SIFKMVE+AYQ+TLV AFVPL CGVYWKRATNQGAL AI  GL TWL +++ G E+P++PA  AGL+AS+IGM++G+LLPQ+I
Sbjct:  182 VIICIGMLIIGNEVSGMAGGVSRVIQHASDAGKFSFWPAADLKEIIAFAAAWVTMMFGSMPQQDVFQRVQSSKTIKIAVWGSVLGGSLYFIFAFVPMFLAYSATLIDPKMVASLIDVDPQLILPTLVLKHAPLFAQVMFFGALLSAIKSCASATLLAPSVTFTENILKPMMPHMTDRQLLKWMRIVTLVFTVLVTLYAINSKLSIFKMVENAYQITLVMAFVPLACGVYWKRATNQGALMAIFMGLSTWLAILIAGPEDPFIPAQFAGLIASMIGMLLGSLLPQKI 467          
BLAST of mRNA_C-australica_Contig_9741.1.1 vs. uniprot
Match: A0A2R5FBE9_9PROT (Sodium:solute symporter n=1 Tax=Novimethylophilus kurashikiensis TaxID=1825523 RepID=A0A2R5FBE9_9PROT)

HSP 1 Score: 390 bits (1003), Expect = 1.960e-131
Identity = 206/283 (72.79%), Postives = 237/283 (83.75%), Query Frame = 1
Query:    1 IIICVGMLYIGNEVSGMVGGVATVVEHADKAGLFNFWPSANSAEVIAFIAAAITMMFGSMPQQDVFQRVQSSSTIFTAVWATVLGGVLYFLFAFVPMFLAYSATLIDPEKVKQIMDIDYQLVLPNLVLNHAPLLAQVLFFGALLSAIKSSASATLLAPSVTFTENILRPFMPAMDEVKLLKVMRLVTLSFAVIVTIYAMYSESSIFKMVEDAYQVTLVTAFVPLVCGVYWKRATNQGALFAIGFGLFTWLGVMLFGAEEPYVPAHLAGLVASIIGMIVGTLLP 849
            IIICVGMLYIG EVSGMVGGV  VV+HA +AG F+FWP+ +  EVIAF AA ITMMFGS+PQQDVFQRVQSS T   A+W +VLGG LYF+FAFVPMFLAYSATLIDP+ VK+ +D D Q++LPNLVL HAPL AQV+FFGALLSAIKS ASATLLAPSVTFTENILRP M  M + KLL  MR+VTL+F V+VT+YAM S+ SIFKMVE+AYQVTLV AFVPL CGVYWKRATNQGAL +I  GL TWL V+L G E+P +PA  AGL+AS +GM+VG+L+P
Sbjct:  182 IIICVGMLYIGGEVSGMVGGVGAVVQHASEAGKFSFWPTMDLKEVIAFAAAWITMMFGSIPQQDVFQRVQSSKTEKIAIWGSVLGGSLYFIFAFVPMFLAYSATLIDPKMVKKFIDADPQMILPNLVLQHAPLFAQVMFFGALLSAIKSCASATLLAPSVTFTENILRPMMSKMSDQKLLYWMRVVTLTFTVLVTLYAMNSKMSIFKMVENAYQVTLVMAFVPLACGVYWKRATNQGALLSIFLGLSTWLAVLLVGPEDPLIPAQFAGLIASTLGMVVGSLMP 464          
BLAST of mRNA_C-australica_Contig_9741.1.1 vs. uniprot
Match: A0A3S0FFJ0_9RHOO (Sodium:solute symporter n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A3S0FFJ0_9RHOO)

HSP 1 Score: 370 bits (950), Expect = 2.390e-123
Identity = 191/284 (67.25%), Postives = 234/284 (82.39%), Query Frame = 1
Query:    1 IIICVGMLYIGNEVSGMVGGVATVVEHADKAGLFNFWPSANSAEVIAFIAAAITMMFGSMPQQDVFQRVQSSSTIFTAVWATVLGGVLYFLFAFVPMFLAYSATLIDPEKVKQIMDIDYQLVLPNLVLNHAPLLAQVLFFGALLSAIKSSASATLLAPSVTFTENILRPFMPAMDEVKLLKVMRLVTLSFAVIVTIYAMYSESSIFKMVEDAYQVTLVTAFVPLVCGVYWKRATNQGALFAIGFGLFTWLGVMLFGAEEPYVPAHLAGLVASIIGMIVGTLLPQ 852
            I+I +GML+IG EVSG VGGV  VV HA +   F+FWP A++ E+I F AA ITMMFGS+PQQDVFQRVQSS T   AVW +VLGG LYF+FAFVPMFLAYSATLIDP+ V  ++D D Q++LP LV+ HAPL AQV+FFGALLSAIKS ASATLLAPSVTFTEN+L+P M  M + KLL+ MR+VTLSF V+VT+YAM S++SIFKMVE+AYQ+TLV AFVPLV G+YW+RATNQGAL AI  GL TWL +++ G ++P++PA  AG++AS+IGM+ G+LLPQ
Sbjct:  182 IVIVLGMLWIGGEVSGQVGGVGVVVAHAAQNAKFDFWPVADAKEIIGFFAAWITMMFGSIPQQDVFQRVQSSKTEKIAVWGSVLGGSLYFIFAFVPMFLAYSATLIDPQMVDALIDTDSQMILPRLVMEHAPLFAQVMFFGALLSAIKSCASATLLAPSVTFTENLLKPMMAHMSDHKLLRTMRIVTLSFTVLVTLYAMNSKASIFKMVENAYQITLVMAFVPLVFGLYWRRATNQGALLAIFLGLSTWLSILIAGPDDPFIPAQFAGVIASLIGMVAGSLLPQ 465          
BLAST of mRNA_C-australica_Contig_9741.1.1 vs. uniprot
Match: A0A2Z6GET5_9PROT (High-affinity proline transporter PutP n=1 Tax=Ferriphaselus amnicola TaxID=1188319 RepID=A0A2Z6GET5_9PROT)

HSP 1 Score: 369 bits (948), Expect = 5.760e-123
Identity = 195/285 (68.42%), Postives = 233/285 (81.75%), Query Frame = 1
Query:    1 IIICVGMLYIGNEVSGMVGGVATVVEHADKAGLFNFWPSANSAEVIAFIAAAITMMFGSMPQQDVFQRVQSSSTIFTAVWATVLGGVLYFLFAFVPMFLAYSATLIDPEKVKQIMDIDYQLVLPNLVLNHAPLLAQVLFFGALLSAIKSSASATLLAPSVTFTENILRPFMPAMDEVKLLKVMRLVTLSFAVIVTIYAMYSESSIFKMVEDAYQVTLVTAFVPLVCGVYWKRATNQGALFAIGFGLFTWLGVMLFGAEEPYVPAHLAGLVASIIGMIVGTLLPQR 855
            III VGML+IG+E+SG VGGV  VVEHA +AG F FWP+ ++ E+IAF AA +TMMFGS+PQQDVFQRVQS+ T   AVW +VLGG LYFLFAFVPMFLAYSATLIDP+ V+ ++D D Q++LPNLVL HAPL AQV+FFGALLSAIKS ASATLLAPSVTFTENIL+P M  M + KLL  MR VTL F V VT+YAM S++SIFKMVE AYQ+TLV AF+PL+ G++WKRAT+QGAL AI  GL  WL + LFG E+P++PA  AGL+AS  GM++G+LLP R
Sbjct:  182 IIIVVGMLFIGHEISGQVGGVGVVVEHARQAGKFEFWPTLDAKEIIAFAAAWMTMMFGSIPQQDVFQRVQSAKTERIAVWGSVLGGGLYFLFAFVPMFLAYSATLIDPKMVEGLIDTDPQMILPNLVLQHAPLFAQVMFFGALLSAIKSCASATLLAPSVTFTENILKPLMGTMTDRKLLLTMRSVTLVFTVAVTLYAMSSDASIFKMVESAYQITLVAAFIPLLAGLFWKRATHQGALAAIFAGLAVWLSIHLFGPEDPFLPAQFAGLLASACGMVIGSLLPNR 466          
BLAST of mRNA_C-australica_Contig_9741.1.1 vs. uniprot
Match: A0A1F2Z2N6_9PROT (Sodium:solute symporter n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_46_13 TaxID=1797220 RepID=A0A1F2Z2N6_9PROT)

HSP 1 Score: 368 bits (945), Expect = 1.200e-122
Identity = 195/288 (67.71%), Postives = 233/288 (80.90%), Query Frame = 1
Query:    1 IIICVGMLYIGNEVSGMVGGVATVVEHADKAGLFNFWPSANSAEVIAFIAAAITMMFGSMPQQDVFQRVQSSSTIFTAVWATVLGGVLYFLFAFVPMFLAYSATLIDPEKVKQIMDI--DYQLVLPNLVLNHAPLLAQVLFFGALLSAIKSSASATLLAPSVTFTENILRPFMPAMDEVKLLKVMRLVTLSFAVIVTIYAMYSESSIFKMVEDAYQVTLVTAFVPLVCGVYWKRATNQGALFAIGFGLFTWLGVMLFGAEEPYVPAHLAGLVASIIGMIVGTLLPQRI 858
            III +GMLYIG EVS + GGV TVV+HA  AG F FWPSA+  ++IAF AAA+TMM GSMPQQDVFQRVQS+ TI  AVW +VLGG LYF+FAFVPMFLAYSATLIDP+ V + M    D Q++LP LVL HAPL AQV+FFGALLSAIKS ASATLLAPSV+F+ENIL+P MP M + KLLK+MR VTL F ++VT+YA+ SE SIF MVE+AYQVTLV+AF+PL  GVYWKRATNQGAL AI  GL  W+G +LF  ++P++P+  AGL+AS  GMI+G+L+PQ I
Sbjct:  182 IIIVIGMLYIGGEVSELAGGVGTVVQHARDAGKFEFWPSADMKDIIAFAAAAMTMMLGSMPQQDVFQRVQSAKTIKYAVWGSVLGGSLYFIFAFVPMFLAYSATLIDPDMVAKNMGEGGDPQMILPQLVLTHAPLFAQVMFFGALLSAIKSCASATLLAPSVSFSENILKPMMPHMSDKKLLKLMRFVTLGFTIVVTLYAVNSELSIFSMVENAYQVTLVSAFIPLAFGVYWKRATNQGALCAIFVGLIVWIGSILFAGDDPFIPSQFAGLIASFFGMIIGSLVPQYI 469          
BLAST of mRNA_C-australica_Contig_9741.1.1 vs. uniprot
Match: A0A522XSY1_9RHOO (Sodium:solute symporter n=1 Tax=Rugosibacter sp. TaxID=1914450 RepID=A0A522XSY1_9RHOO)

HSP 1 Score: 369 bits (946), Expect = 1.480e-122
Identity = 191/285 (67.02%), Postives = 234/285 (82.11%), Query Frame = 1
Query:    1 IIICVGMLYIGNEVSGMVGGVATVVEHADKAGLFNFWPSANSAEVIAFIAAAITMMFGSMPQQDVFQRVQSSSTIFTAVWATVLGGVLYFLFAFVPMFLAYSATLIDPEKVKQIMDIDYQLVLPNLVLNHAPLLAQVLFFGALLSAIKSSASATLLAPSVTFTENILRPFMPAMDEVKLLKVMRLVTLSFAVIVTIYAMYSESSIFKMVEDAYQVTLVTAFVPLVCGVYWKRATNQGALFAIGFGLFTWLGVMLFGAEEPYVPAHLAGLVASIIGMIVGTLLPQR 855
            III +GML+IG EVS MVGGV  VV+HA KAG+FNFWP+ +  E++AF AA +TMMFGS+PQQDVFQRVQSS T   AVW  VLGG LYF FAFVPMFLAYSATLI P  V ++++ D Q++LP LVL  APL+AQ++FFGALLSAIKS ASATLLAPSVTFTENIL+P +  + + KLL  MR VTL+F ++VT+YA+ S++SIFKMVE+AYQ+TLVTAFVP+V G+YW+RATNQGA  AI  GL  WL +++FG E+P VPA  AGL+ASI+GMI+G+LLPQR
Sbjct:  182 IIIVIGMLWIGGEVSSMVGGVGVVVDHAAKAGMFNFWPTLDLKEILAFTAAWVTMMFGSIPQQDVFQRVQSSRTEKIAVWGAVLGGSLYFAFAFVPMFLAYSATLISPAMVAELVNTDPQMILPRLVLEKAPLIAQIMFFGALLSAIKSCASATLLAPSVTFTENILKPLVGGLSDRKLLFAMRAVTLAFTLLVTLYAVNSKASIFKMVENAYQITLVTAFVPMVAGIYWRRATNQGAAMAIFLGLAIWLALLMFGPEDPLVPAQFAGLIASILGMIIGSLLPQR 466          
BLAST of mRNA_C-australica_Contig_9741.1.1 vs. uniprot
Match: H0PRJ6_9RHOO (Sodium/solute symporter n=1 Tax=Azoarcus sp. KH32C TaxID=748247 RepID=H0PRJ6_9RHOO)

HSP 1 Score: 367 bits (943), Expect = 2.480e-122
Identity = 191/286 (66.78%), Postives = 235/286 (82.17%), Query Frame = 1
Query:    1 IIICVGMLYIGNEVSGMVGGVATVVEHADKAGLFNFWPSANSAEVIAFIAAAITMMFGSMPQQDVFQRVQSSSTIFTAVWATVLGGVLYFLFAFVPMFLAYSATLIDPEKVKQIMDIDYQLVLPNLVLNHAPLLAQVLFFGALLSAIKSSASATLLAPSVTFTENILRPFMPAMDEVKLLKVMRLVTLSFAVIVTIYAMYSESSIFKMVEDAYQVTLVTAFVPLVCGVYWKRATNQGALFAIGFGLFTWLGVMLFGAEEPYVPAHLAGLVASIIGMIVGTLLPQRI 858
            I+I +GML+IG EVSGMVGGV  V+  A + G F FWP+ ++ E+I F+AA +TMMFGS+PQQDVFQRVQSS T   AVW +VLGG LYF+FAFVPMFLAYSATLI PE V ++ + D Q++LP LV+  APL AQV+FFGALLSAIKS ASATLLAPSVTFTEN+L+P M  + + KLL  MR+VTLSF V+VT+YAMYS++SIFKMVE+AYQ+TLV AFVPL CGVYW+R+TNQGAL +I FG+ TWL V++ G E+P++PA LAGL+AS IGM+ G+LLPQ I
Sbjct:  182 IVIVLGMLWIGGEVSGMVGGVDVVIAKATEEGKFAFWPAMDAKEIIGFVAAWVTMMFGSIPQQDVFQRVQSSKTEKIAVWGSVLGGSLYFVFAFVPMFLAYSATLISPEMVAELTESDPQMILPRLVMEKAPLFAQVMFFGALLSAIKSCASATLLAPSVTFTENLLKPMMGKVSDRKLLLTMRIVTLSFTVLVTLYAMYSKASIFKMVENAYQITLVMAFVPLACGVYWRRSTNQGALVSIFFGVGTWLTVLVGGPEDPFIPAQLAGLIASAIGMVAGSLLPQAI 467          
BLAST of mRNA_C-australica_Contig_9741.1.1 vs. uniprot
Match: A0A6F8V8V7_9PROT (Sodium:solute symporter n=1 Tax=Sulfurimicrobium lacus TaxID=2715678 RepID=A0A6F8V8V7_9PROT)

HSP 1 Score: 367 bits (943), Expect = 3.090e-122
Identity = 194/286 (67.83%), Postives = 236/286 (82.52%), Query Frame = 1
Query:    1 IIICVGMLYIGNEVSGMVGGVATVVEHADKAGLFNFWPSANSAEVIAFIAAAITMMFGSMPQQDVFQRVQSSSTIFTAVWATVLGGVLYFLFAFVPMFLAYSATLIDPEKVKQIMDIDYQLVLPNLVLNHAPLLAQVLFFGALLSAIKSSASATLLAPSVTFTENILRPFMPAMDEVKLLKVMRLVTLSFAVIVTIYAMYSESSIFKMVEDAYQVTLVTAFVPLVCGVYWKRATNQGALFAIGFGLFTWLGVMLFGAEEPYVPAHLAGLVASIIGMIVGTLLPQRI 858
            III +GMLYIGNEVSGMVGGV  VV+HA +A  F FWP+ ++ E++ FIAA +TMMFGS+PQQDVFQRVQSS T   AVW +VLGGVLYF FAFVPMFLAYSATL+DP  V  +++ D QL+LP LVL+ APL+AQVLFFGALLSAIKS ASATLLAPSV+FTENIL+P M  M + +LL  MR+VT+ F V+VT+YA +S++SIFKMVE AYQVTLVTAF+PL+ G+YWKRATNQGAL +I  GL  WL +++FG ++P+VPA LAGL+AS  GM+ G+LLP RI
Sbjct:  182 IIIVLGMLYIGNEVSGMVGGVGVVVDHAMQANKFEFWPALDAKEMLGFIAAWVTMMFGSIPQQDVFQRVQSSKTEKIAVWGSVLGGVLYFGFAFVPMFLAYSATLLDPAMVAGLINTDSQLILPRLVLDKAPLVAQVLFFGALLSAIKSCASATLLAPSVSFTENILKPMMGKMSDRRLLLSMRIVTVVFTVLVTLYATHSKASIFKMVESAYQVTLVTAFIPLLAGIYWKRATNQGALLSIFCGLAVWLPLLVFGPDDPFVPAQLAGLIASAAGMVAGSLLPNRI 467          
BLAST of mRNA_C-australica_Contig_9741.1.1 vs. uniprot
Match: UPI0012918F1C (sodium:solute symporter family protein n=1 Tax=Zoogloea sp. 1C4 TaxID=2570190 RepID=UPI0012918F1C)

HSP 1 Score: 365 bits (936), Expect = 3.210e-121
Identity = 193/284 (67.96%), Postives = 237/284 (83.45%), Query Frame = 1
Query:    1 IIICVGMLYIGNEVSGMVGGVATVVEHADKAGLFNFWPSANSAEVIAFIAAAITMMFGSMPQQDVFQRVQSSSTIFTAVWATVLGGVLYFLFAFVPMFLAYSATLIDPEKVKQIMDIDYQLVLPNLVLNHAPLLAQVLFFGALLSAIKSSASATLLAPSVTFTENILRPFMPAMDEVKLLKVMRLVTLSFAVIVTIYAMYSESSIFKMVEDAYQVTLVTAFVPLVCGVYWKRATNQGALFAIGFGLFTWLGVMLFGAEEPYVPAHLAGLVASIIGMIVGTLLPQ 852
            III +GML+IG EVSGM GGV  VV HA ++G FN  P  ++ EVIAFIAAAITMM GS+PQQDVFQRVQS+ +   AVW +VLGG LYFLFAFVPMFLAYSATLIDPE V +++D D Q++LP LVL+ APL AQV+FFGALLSAIKS ASATLLAPSVTFTENIL+P +P + + KLL  MR+VTL F V+VT+YAM+S+++IFKMVE+AYQ+TLV+AF+PL+CG+YW+RATNQGAL +I  G+  WLGV L G ++P+VPA LAGL+AS +GMIVG+L+ Q
Sbjct:  182 IIIVIGMLWIGGEVSGMAGGVGVVVNHAMESGKFNMLPPPDAKEVIAFIAAAITMMLGSIPQQDVFQRVQSAKSEKIAVWGSVLGGSLYFLFAFVPMFLAYSATLIDPEMVARLIDSDSQMILPELVLSKAPLFAQVMFFGALLSAIKSCASATLLAPSVTFTENILKPALPHLTDKKLLFWMRVVTLIFTVLVTLYAMFSKATIFKMVENAYQITLVSAFIPLLCGLYWRRATNQGALASIFCGISVWLGVHLAGGDDPFVPAQLAGLIASAVGMIVGSLVKQ 465          
BLAST of mRNA_C-australica_Contig_9741.1.1 vs. uniprot
Match: A0A0A1H6Y3_9BURK (Na+/solute symporter n=1 Tax=Burkholderiales bacterium GJ-E10 TaxID=1469502 RepID=A0A0A1H6Y3_9BURK)

HSP 1 Score: 361 bits (926), Expect = 9.800e-120
Identity = 194/286 (67.83%), Postives = 227/286 (79.37%), Query Frame = 1
Query:    1 IIICVGMLYIGNEVSGMVGGVATVVEHADKAGLFNFWPSANSAEVIAFIAAAITMMFGSMPQQDVFQRVQSSSTIFTAVWATVLGGVLYFLFAFVPMFLAYSATLIDPEKVKQIMDIDYQLVLPNLVLNHAPLLAQVLFFGALLSAIKSSASATLLAPSVTFTENILRPFMPAMDEVKLLKVMRLVTLSFAVIVTIYAMYSESSIFKMVEDAYQVTLVTAFVPLVCGVYWKRATNQGALFAIGFGLFTWLGVMLFGAEEPYVPAHLAGLVASIIGMIVGTLLPQRI 858
            III +GMLYIG  VS +VGGV TVV HA  AG F+FWP  +  +VI F AA ITMM GS+PQQDVFQRVQSS T   AVWA+V GG LYFLFAFVPMFLAYSATLI+P+ V  ++D D Q++LP LVL+ APL+AQV+FFGALLSAIKS ASATLLAPSVTFTEN+L+P+ P   + KLL  MR VTLSF V+VT+YA++S  +IFKMVEDAYQVTLV AFVPL CGVYWK ATNQG+L +I  GL  WL +  FG ++P +P  LAGL+AS IGMIVG+L PQRI
Sbjct:  182 IIIVLGMLYIGGSVSSLVGGVGTVVAHAAAAGKFSFWPPLDLKDVIGFFAAWITMMLGSIPQQDVFQRVQSSKTEPIAVWASVTGGTLYFLFAFVPMFLAYSATLIEPKMVSGLIDTDPQMILPRLVLDKAPLIAQVMFFGALLSAIKSCASATLLAPSVTFTENVLKPWFPHWSDRKLLFAMRAVTLSFTVLVTLYAVFSHLTIFKMVEDAYQVTLVCAFVPLFCGVYWKHATNQGSLLSIFLGLSVWLAMEFFGPDDPLIPGQLAGLLASAIGMIVGSLGPQRI 467          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9741.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0NT51_9PROT1.800e-13370.98Sodium:solute symporter n=3 Tax=Methylophilaceae b... [more]
A0A2R5FBE9_9PROT1.960e-13172.79Sodium:solute symporter n=1 Tax=Novimethylophilus ... [more]
A0A3S0FFJ0_9RHOO2.390e-12367.25Sodium:solute symporter n=1 Tax=Rhodocyclaceae bac... [more]
A0A2Z6GET5_9PROT5.760e-12368.42High-affinity proline transporter PutP n=1 Tax=Fer... [more]
A0A1F2Z2N6_9PROT1.200e-12267.71Sodium:solute symporter n=1 Tax=Alphaproteobacteri... [more]
A0A522XSY1_9RHOO1.480e-12267.02Sodium:solute symporter n=1 Tax=Rugosibacter sp. T... [more]
H0PRJ6_9RHOO2.480e-12266.78Sodium/solute symporter n=1 Tax=Azoarcus sp. KH32C... [more]
A0A6F8V8V7_9PROT3.090e-12267.83Sodium:solute symporter n=1 Tax=Sulfurimicrobium l... [more]
UPI0012918F1C3.210e-12167.96sodium:solute symporter family protein n=1 Tax=Zoo... [more]
A0A0A1H6Y3_9BURK9.800e-12067.83Na+/solute symporter n=1 Tax=Burkholderiales bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_9741contigC-australica_Contig_9741:2..859 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog748247.AZKH_0492
PFAMsSSF
Model size858
Max annot lvl206389|Rhodocyclales
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.48e-121
EggNOG OGsCOG0591@1|root,COG0591@2|Bacteria,1MUBI@1224|Proteobacteria,2VHA8@28216|Betaproteobacteria,2KUVM@206389|Rhodocyclales
DescriptionBelongs to the sodium solute symporter (SSF) (TC 2.A.21) family
Cds size840
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588841.2534206-CDS-C-australica_Contig_9741:1..8411682588841.2534206-CDS-C-australica_Contig_9741:1..841Chrysoparadoxa australica CS_1217CDSC-australica_Contig_9741 2..841 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588841.2706325-UTR-C-australica_Contig_9741:841..8591682588841.2706325-UTR-C-australica_Contig_9741:841..859Chrysoparadoxa australica CS_1217UTRC-australica_Contig_9741 842..859 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_9741.1.1prot_C-australica_Contig_9741.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_9741 2..841 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_9741.1.1

>prot_C-australica_Contig_9741.1.1 ID=prot_C-australica_Contig_9741.1.1|Name=mRNA_C-australica_Contig_9741.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=280bp
MLYIGNEVSGMVGGVATVVEHADKAGLFNFWPSANSAEVIAFIAAAITMM
FGSMPQQDVFQRVQSSSTIFTAVWATVLGGVLYFLFAFVPMFLAYSATLI
DPEKVKQIMDIDYQLVLPNLVLNHAPLLAQVLFFGALLSAIKSSASATLL
APSVTFTENILRPFMPAMDEVKLLKVMRLVTLSFAVIVTIYAMYSESSIF
KMVEDAYQVTLVTAFVPLVCGVYWKRATNQGALFAIGFGLFTWLGVMLFG
AEEPYVPAHLAGLVASIIGMIVGTLLPQRI
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mRNA from alignment at C-australica_Contig_9741:2..859-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_9741.1.1 ID=mRNA_C-australica_Contig_9741.1.1|Name=mRNA_C-australica_Contig_9741.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=858bp|location=Sequence derived from alignment at C-australica_Contig_9741:2..859- (Chrysoparadoxa australica CS_1217)
ATTATTATCTGTGTCGGCATGCTGTATATTGGCAATGAAGTGAGTGGCAT GGTTGGTGGGGTTGCAACAGTGGTTGAACATGCCGATAAGGCAGGGTTGT TTAATTTCTGGCCTTCTGCCAATAGTGCGGAGGTAATTGCCTTTATTGCC GCGGCTATTACCATGATGTTTGGTTCAATGCCGCAACAAGATGTATTTCA GCGCGTTCAATCTTCCAGCACTATTTTTACTGCCGTTTGGGCAACGGTTT TAGGTGGTGTGCTGTATTTCTTATTTGCATTTGTACCGATGTTTTTAGCG TATTCTGCCACATTGATAGACCCTGAAAAAGTTAAACAAATAATGGATAT AGATTACCAATTGGTATTGCCTAATCTAGTGTTAAACCATGCGCCATTGT TGGCTCAGGTGCTTTTTTTTGGTGCTTTATTATCTGCTATTAAAAGTAGT GCTTCAGCAACGTTATTAGCACCATCTGTTACATTTACAGAGAATATATT AAGACCATTTATGCCCGCGATGGATGAAGTTAAACTATTGAAAGTGATGC GCTTGGTGACCTTGTCTTTTGCTGTTATTGTCACCATCTATGCCATGTAT TCAGAGTCAAGTATCTTTAAAATGGTAGAGGATGCTTATCAAGTGACGCT AGTGACTGCGTTTGTCCCACTTGTCTGTGGTGTTTATTGGAAAAGGGCAA CGAATCAAGGCGCATTATTTGCAATTGGCTTTGGTTTATTTACTTGGTTG GGAGTAATGCTGTTCGGTGCAGAAGAGCCATATGTACCAGCACACCTTGC AGGCTTAGTTGCGAGCATTATTGGTATGATTGTTGGTACTTTATTACCAC AGAGAATC
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Coding sequence (CDS) from alignment at C-australica_Contig_9741:2..859-

>mRNA_C-australica_Contig_9741.1.1 ID=mRNA_C-australica_Contig_9741.1.1|Name=mRNA_C-australica_Contig_9741.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=840bp|location=Sequence derived from alignment at C-australica_Contig_9741:2..859- (Chrysoparadoxa australica CS_1217)
ATGCTGTATATTGGCAATGAAGTGAGTGGCATGGTTGGTGGGGTTGCAAC
AGTGGTTGAACATGCCGATAAGGCAGGGTTGTTTAATTTCTGGCCTTCTG
CCAATAGTGCGGAGGTAATTGCCTTTATTGCCGCGGCTATTACCATGATG
TTTGGTTCAATGCCGCAACAAGATGTATTTCAGCGCGTTCAATCTTCCAG
CACTATTTTTACTGCCGTTTGGGCAACGGTTTTAGGTGGTGTGCTGTATT
TCTTATTTGCATTTGTACCGATGTTTTTAGCGTATTCTGCCACATTGATA
GACCCTGAAAAAGTTAAACAAATAATGGATATAGATTACCAATTGGTATT
GCCTAATCTAGTGTTAAACCATGCGCCATTGTTGGCTCAGGTGCTTTTTT
TTGGTGCTTTATTATCTGCTATTAAAAGTAGTGCTTCAGCAACGTTATTA
GCACCATCTGTTACATTTACAGAGAATATATTAAGACCATTTATGCCCGC
GATGGATGAAGTTAAACTATTGAAAGTGATGCGCTTGGTGACCTTGTCTT
TTGCTGTTATTGTCACCATCTATGCCATGTATTCAGAGTCAAGTATCTTT
AAAATGGTAGAGGATGCTTATCAAGTGACGCTAGTGACTGCGTTTGTCCC
ACTTGTCTGTGGTGTTTATTGGAAAAGGGCAACGAATCAAGGCGCATTAT
TTGCAATTGGCTTTGGTTTATTTACTTGGTTGGGAGTAATGCTGTTCGGT
GCAGAAGAGCCATATGTACCAGCACACCTTGCAGGCTTAGTTGCGAGCAT
TATTGGTATGATTGTTGGTACTTTATTACCACAGAGAATC
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