mRNA_C-australica_Contig_969.4.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_969.4.1 vs. uniprot
Match: A0A836CAZ1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAZ1_9STRA) HSP 1 Score: 232 bits (591), Expect = 7.480e-66 Identity = 137/292 (46.92%), Postives = 174/292 (59.59%), Query Frame = 2
Query: 353 VQPSPKSETRFSSIIGCDKAKRALMEHVVLPLKLPTAVREVIFIGARAAGNHILMYGAPGTGKTSLANAAASEADATFFQVLPSSVLSKYQGESERALERVFMEAKAAAPSVIFLDEVDALASSRDTSDDLQGRRLLAELLLQ-------------------------------------------------------MTALQPRDRVTVLGATNRADFVDEALLRRFHSKILVEEPTKAERVQLLGHFLMGVKHSLEQRALEELAGQMAGWTGSDIQSLCKEAAMAPIREL 1063
VQ S TRF SI+GC+ K+AL E+VVLPL LP ++R+ IF+G RAA ++L+YG PGTGKTSLA AAA EA A F+ + PSS+LSKYQGESER L VF +A+AA P+V+FLDE+DAL SRD +DLQGRRLLAELLLQ + L RD V V+ ATNRA+ VD ALLRRFH++I V P A+ ++ FL GV HS+ + Q A W+GSD+++LC+EAA+AP+REL
Sbjct: 156 VQAPTISATRFDSIVGCEGGKQALRENVVLPLALPPSIRDAIFVGPRAASANVLLYGPPGTGKTSLAEAAAGEAGARFYALSPSSILSKYQGESERMLRAVFAQARAAPPAVVFLDEIDALGCSRDGCEDLQGRRLLAELLLQDATVTEYQGGAGGAAAADATVTXXXXXXXXXXXXXXXXXXXXXQQGRLLAELLLQVGGLSSRDGVAVIAATNRAEDVDVALLRRFHARIQVAGPGPADLRRMCATFLAGVDHSVTDADFANASNQ-ARWSGSDVRALCREAALAPVREL 446
BLAST of mRNA_C-australica_Contig_969.4.1 vs. uniprot
Match: A0A059CJZ0_EUCGR (Uncharacterized protein n=6 Tax=Myrtoideae TaxID=1699513 RepID=A0A059CJZ0_EUCGR) HSP 1 Score: 185 bits (470), Expect = 3.740e-49 Identity = 122/316 (38.61%), Postives = 178/316 (56.33%), Query Frame = 2
Query: 242 RKSQLSNDSEGQAEEVLPAGDSP-GTPLTLRQRQPGVLVQPSPKSETRFSSIIGCDKAKRALMEHVVLPLKLPTAVREVIFIGARAAGNHILMYGAPGTGKTSLANAAASEADATFFQVLPSSVLSKYQGESERALERVFMEAKAAAPSVIFLDEVDALASSRDTSDDLQGRRLLAELLLQMTAL--QPRDRVTVLGATNRADFVDEALLRRFHSKILVEEPTKAERVQLLGHFLMGVKHSLEQRALEELAGQMAGWTGSDIQSLCKEAAMAPIRELSAKGVLAGFDTAEAAKALIRPVTLGDCKEALQELRVRVH 1180
R ++L +A PA DS G L + +V SP ++ + G DKAK+ALME V+LP K R +F G R +L++G PG GKT LA A ASE++ATFF V SS+ SK+ GE E+ + +FM A + PSVIF+DE+D++ S+R +++ RRL +E L+Q + P D V V+GATN+ +D+A+LRR +I + P + R LL + L G SL LE LA G++GSD+Q+LC+EAAM PIREL + A ++RP+ D ++A+ +R +H
Sbjct: 141 RNNRLVRSQTEKAASAKPAQDSGNGYEAKLVEMINTAIVDRSPS--VKWEDVAGLDKAKQALMEMVILPTK-----RRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEGEKLVRTLFMVAISRQPSVIFMDEIDSIMSTRLANENDSSRRLKSEFLIQFDGVTSNPNDSVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENVRRLLLRNKLKGQSFSLPSGDLERLARDTEGYSGSDLQALCEEAAMMPIRELGTNILKVK------ANQVVRPLRYEDFQQAMTVIRPSLH 443
BLAST of mRNA_C-australica_Contig_969.4.1 vs. uniprot
Match: A0A0A0L4C5_CUCSA (Uncharacterized protein n=7 Tax=Benincaseae TaxID=1003877 RepID=A0A0A0L4C5_CUCSA) HSP 1 Score: 186 bits (471), Expect = 5.110e-49 Identity = 123/310 (39.68%), Postives = 174/310 (56.13%), Query Frame = 2
Query: 245 KSQLSNDSEGQAEEVLPAGDSPGTPLTLRQRQPGVLVQPSPKSETRFSSIIGCDKAKRALMEHVVLPLKLPTAVREVIFIGARAAGNHILMYGAPGTGKTSLANAAASEADATFFQVLPSSVLSKYQGESERALERVFMEAKAAAPSVIFLDEVDALASSRDTSDDLQGRRLLAELLLQMTALQPR--DRVTVLGATNRADFVDEALLRRFHSKILVEEPTKAERVQLLGHFLMGVKHSLEQRALEELAGQMAGWTGSDIQSLCKEAAMAPIRELSAKGVLAGFDTAEAAKALIRPVTLGDCKEALQELR 1168
+SQ +N Q+ +P G P L + +V SP ++ I G KAK+AL+E V+LP K R +F G R +L++G PG GKT LA A ASE+DATFF + +S SK+ GESE+ + +FM AK+ PSVIF+DE+D++ SSR + RRL +E L+Q + D V V+GATN+ +D+A+LRR +I + P + R LL H L G +SL R LE L Q G++GSD+Q+LC+EAAM PIREL + D IR + D +EA++ +R
Sbjct: 179 RSQPANVGTSQSTREVPDGYDP----KLVEMINTAIVDRSPS--VKWDDIAGLQKAKQALLEMVILPTK-----RRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESDATFFNLSAASFTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSSRHAGEHEASRRLKSEFLVQFDGVTSNSTDLVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENGRRLLLKHNLKGQSYSLPTRDLERLVKQTEGYSGSDLQALCEEAAMMPIRELGGNILTVKADQ-------IRSLKYEDFQEAMKVIR 470
BLAST of mRNA_C-australica_Contig_969.4.1 vs. uniprot
Match: A0A540LHU3_MALBA (Uncharacterized protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540LHU3_MALBA) HSP 1 Score: 187 bits (476), Expect = 5.570e-49 Identity = 120/339 (35.40%), Postives = 183/339 (53.98%), Query Frame = 2
Query: 350 LVQPSPKSETRFSSIIGCDKAKRALMEHVVLPLKLPTAVREVIFIGARAAGNHILMYGAPGTGKTSLANAAASEADATFFQVLPSSVLSKYQGESERALERVFMEAKAAAPSVIFLDEVDALASSRDTSDDLQGRRLLAELLLQMTAL--QPRDRVTVLGATNRADFVDEALLRRFHSKILVEEPTKAERVQLLGHFLMGVKHSLEQRALEELAGQMAGWTGSDIQSLCKEAAMAPIRELSAKGVLAGFDTAEAAKALIRPVTLGDCKEALQELRVRVHTQGSQNTQEAS*VACKKTFMLQGVGSGSGESDVWLLHSSGPGQA-SVTFEICFVFGREPW 1357
+V SP ++ + G +K K+ LME ++LP K R +F G R +L++G PG GKT LA A ASE++ATFF V SS+ SK+ GE+E+ + +FM A + PSVIF+DE+D++ S+R +++ RRL +E L+Q + P D V V+GATN+ +D+A+LRR ++ + P R LL H L G SL +E LA + G++GSD+Q+LC+EAAM PIREL G + +RP+ D ++A+ +R + + + S C F Q + + DVW++ G ++ S V G PW
Sbjct: 199 IVDRSPS--VKWEDVAGLEKVKQTLMEMIILPTK-----RRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAISRQPSVIFMDEIDSVMSTRQANENDASRRLKSEFLIQFDGVTSNPNDLVIVIGATNKPQELDDAVLRRLVKRVYIPLPDLTARRVLLRHKLKGQAFSLPSGDVERLARETEGYSGSDLQALCEEAAMMPIREL-------GENILTVRANQVRPLRYEDFQKAMTVIRPSLSKSKWEELERGSLCICVNHFNAQDLAT---RKDVWIMKEYGVTESWSWNLLYSIVHGNVPW 520
BLAST of mRNA_C-australica_Contig_969.4.1 vs. uniprot
Match: W9SCJ7_9ROSA (Vesicle-fusing ATPase n=2 Tax=Morus notabilis TaxID=981085 RepID=W9SCJ7_9ROSA) HSP 1 Score: 185 bits (470), Expect = 6.820e-49 Identity = 116/276 (42.03%), Postives = 168/276 (60.87%), Query Frame = 2
Query: 350 LVQPSPKSETRFSSIIGCDKAKRALMEHVVLPLKLPTAVREVIFIGARAAGNHILMYGAPGTGKTSLANAAASEADATFFQVLPSSVLSKYQGESERALERVFMEAKAAAPSVIFLDEVDALASSRDTSDDLQGRRLLAELLLQM--TALQPRDRVTVLGATNRADFVDEALLRRFHSKILVEEPTKAERVQLLGHFLMGVKHSLEQRALEELAGQMAGWTGSDIQSLCKEAAMAPIRELSAKGVLAGFDTAEAAKA-LIRPVTLGDCKEALQELR 1168
+V SP ++ + G +KAK+ALME V+LP K R +F G R +L++G PG GKT LA A ASE++ATFF V SS+ SK+ GE+E+ + +FM AK+ PSVIF+DE+D++ S+R +++ RRL +E L+Q A D V V+GATN+ +D+A+LRR +I V P ++ R LL H L G + SL LE LA + G++GSD+Q+LC+EAAM PIREL +T KA +RP+ D ++A+ +R
Sbjct: 208 IVDRSPS--VKWEDVAGLEKAKQALMEMVILPTK-----RRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRTLFMVAKSRQPSVIFMDEIDSMMSTRQANENDASRRLKSEFLIQFDGVASNHNDLVIVIGATNKPQELDDAVLRRLVKRIYVPLPDESLRRVLLRHKLKGQEFSLPSGDLERLARETEGYSGSDLQALCEEAAMMPIRELG--------ETILTVKANQVRPLRYDDFRKAMTVIR 468
BLAST of mRNA_C-australica_Contig_969.4.1 vs. uniprot
Match: A0A139ATE5_GONPJ (AAA-domain-containing protein n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139ATE5_GONPJ) HSP 1 Score: 179 bits (455), Expect = 8.470e-49 Identity = 108/269 (40.15%), Postives = 156/269 (57.99%), Query Frame = 2
Query: 383 FSSIIGCDKAKRALMEHVVLPLKLPTAVREVIFIGARAAGNHILMYGAPGTGKTSLANAAASEADATFFQVLPSSVLSKYQGESERALERVFMEAKAAAPSVIFLDEVDALASSRDTSDDLQGRRLLAELLLQMTALQP--RDRVTVLGATNRADFVDEALLRRFHSKILVEEPTKAERVQLLGHFLMGVKHSLEQRALEELAGQMAGWTGSDIQSLCKEAAMAPIRELSAKGVLAGFDTAEAAKALIRPVTLGDCKEALQELRVRVHT 1183
+ I+G D AKRAL E +VLP ++R +F G R+ +L++G PGTGKT LA A ASEA +TFF + SS+ SK+ GESE+ + +F A+ PSVIF+DEVD++ + R ++ RRL E L+Q + DRV VLGATNR +DEA LRRF +I + P R L GHFL +H L + L+ L Q ++ SD+ +L ++A++ PIREL + + D IRP++ D EA + ++ VH+
Sbjct: 18 WDDIVGLDSAKRALKEIIVLP-----SLRPELFTGLRSPAKGVLLFGPPGTGKTMLARAVASEAHSTFFAISASSLTSKWVGESEKMVRALFALARQMQPSVIFIDEVDSILTERRENEHDASRRLKTEFLIQFDGVSSASEDRVLVLGATNRPQELDEAALRRFTKRIYIPLPEPKTRESLFGHFLKDQRHDLSTKQLQVLVSQTEQYSPSDLHALARDASLGPIRELGDRVLKVPPDK-------IRPISYNDFVEARKMVKSSVHS 274
BLAST of mRNA_C-australica_Contig_969.4.1 vs. uniprot
Match: A0A2K3P5I8_TRIPR (Spastin n=5 Tax=Trifolium TaxID=3898 RepID=A0A2K3P5I8_TRIPR) HSP 1 Score: 184 bits (466), Expect = 9.690e-49 Identity = 114/266 (42.86%), Postives = 165/266 (62.03%), Query Frame = 2
Query: 350 LVQPSPKSETRFSSIIGCDKAKRALMEHVVLPLKLPTAVREVIFIGARAAGNHILMYGAPGTGKTSLANAAASEADATFFQVLPSSVLSKYQGESERALERVFMEAKAAAPSVIFLDEVDALASSRDTSDDLQGRRLLAELLLQMTAL--QPRDRVTVLGATNRADFVDEALLRRFHSKILVEEPTKAERVQLLGHFLMGVKHSLEQRALEELAGQMAGWTGSDIQSLCKEAAMAPIREL-----SAKGVLAGFDTAEAAKALIRP 1126
+V SP R+ + G +KAK+ALME V+LP K R +F G R +L++G PG GKT LA A ASE++ATFF V +S+ SK+ GE+E+ + +FM A + PSVIF+DE+D++ S+R T+++ RRL +E L+Q + P D V V+GATN+ +D+A+LRR +I V P + R LL H L G SL R LE L + G++GSD+Q+LC+EAAM PIREL + +G+ ++ + A A+IRP
Sbjct: 167 IVDRSPS--VRWDDVGGLEKAKQALMEMVILPTK-----RRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVTAASLTSKWVGEAEKLVRTLFMVATSRQPSVIFIDEIDSIMSTRTTNENEASRRLKSEFLIQFDGVTSNPDDIVIVIGATNKPQELDDAVLRRLVKRIYVPLPNENVRKLLLKHKLKGQAFSLPSRDLEMLVKETEGYSGSDLQALCEEAAMMPIRELGPNILTVRGLR--YEDFKKAMAVIRP 423
BLAST of mRNA_C-australica_Contig_969.4.1 vs. uniprot
Match: A0A2P5AF98_PARAD (Spastin n=2 Tax=Cannabaceae TaxID=3481 RepID=A0A2P5AF98_PARAD) HSP 1 Score: 185 bits (469), Expect = 1.050e-48 Identity = 113/275 (41.09%), Postives = 164/275 (59.64%), Query Frame = 2
Query: 350 LVQPSPKSETRFSSIIGCDKAKRALMEHVVLPLKLPTAVREVIFIGARAAGNHILMYGAPGTGKTSLANAAASEADATFFQVLPSSVLSKYQGESERALERVFMEAKAAAPSVIFLDEVDALASSRDTSDDLQGRRLLAELLLQMTALQPR--DRVTVLGATNRADFVDEALLRRFHSKILVEEPTKAERVQLLGHFLMGVKHSLEQRALEELAGQMAGWTGSDIQSLCKEAAMAPIRELSAKGVLAGFDTAEAAKALIRPVTLGDCKEALQELR 1168
+V SP ++ + G +KAK+ALME V+LP K R +F G R +L++G PG GKT LA A ASE+DATFF V SS+ SK+ GE+E+ + +FM AK PSVIF+DE+D++ S R +++ RRL +E L+Q + D + V+GATN+ +D+A++RR +I V P +A R LLGH L G SL LE LA + G++GSD+Q+LC+EAA+ PIREL G + +RP+ D ++A+ +R
Sbjct: 213 IVDTSPS--VKWEDVAGLEKAKQALMEMVILPTK-----RRDLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESDATFFNVSASSLTSKWVGEAEKLVRTLFMVAKFRQPSVIFMDEIDSIMSIRQANENDASRRLKSEFLIQFDGVTSNHNDLIIVIGATNKPQELDDAVMRRLVKRIYVPLPDEALRRLLLGHKLKGQAFSLPNGDLERLARETEGYSGSDLQALCEEAALMPIREL-------GENILTIKANQVRPLRFDDFRKAMTVIR 473
BLAST of mRNA_C-australica_Contig_969.4.1 vs. uniprot
Match: A0A6J1D123_MOMCH (spastin n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1D123_MOMCH) HSP 1 Score: 184 bits (468), Expect = 1.390e-48 Identity = 121/311 (38.91%), Postives = 179/311 (57.56%), Query Frame = 2
Query: 245 KSQLSNDSEGQAEEVLPAGDSPGTPLTLRQRQPGVLVQPSPKSETRFSSIIGCDKAKRALMEHVVLPLKLPTAVREVIFIGARAAGNHILMYGAPGTGKTSLANAAASEADATFFQVLPSSVLSKYQGESERALERVFMEAKAAAPSVIFLDEVDALASSRDTSDDLQGRRLLAELLLQ---MTALQPRDRVTVLGATNRADFVDEALLRRFHSKILVEEPTKAERVQLLGHFLMGVKHSLEQRALEELAGQMAGWTGSDIQSLCKEAAMAPIRELSAKGVLAGFDTAEAAKALIRPVTLGDCKEALQELR 1168
+SQ +N ++ + +P G P L + +V SP ++ I G KAK+AL+E V+LP K R +F G R +L++G PG GKT LA A ASE++ATFF V +S+ SK+ GESE+ + +FM AK+ PSVIF+DE+D++ S+R +++ RRL +E L+Q +T+ D V V+GATN+ +D+A+LRR +I + P + R LL H L G SL R LE L Q G++GSD+Q+LC+EAAM PIREL + + IR + D +EA++ +R
Sbjct: 179 RSQPANVGTSKSVQQVPDGYDP----KLVEMINTAIVDQSPS--VKWDDIAGLQKAKQALLEMVILPTK-----RRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSAASLTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEIDSVMSTRHANENEASRRLKSEFLVQFDGVTSNSTTDLVIVIGATNKPQELDDAVLRRLVKRIYIPLPDENGRRLLLKHKLKGQSFSLPSRDLERLVIQTEGYSGSDLQALCEEAAMMPIRELGGNILTVNANQ-------IRALKYADFQEAMKVIR 471
BLAST of mRNA_C-australica_Contig_969.4.1 vs. uniprot
Match: A0A7S1DVU0_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DVU0_HEMAN) HSP 1 Score: 179 bits (454), Expect = 2.540e-48 Identity = 114/302 (37.75%), Postives = 170/302 (56.29%), Query Frame = 2
Query: 308 PGTPLTLRQRQPGVLVQPSPKSETRFSSIIGCDKAKRALMEHVVLPLKLPTAVREVIFIGARAAGNHILMYGAPGTGKTSLANAAASEADATFFQVLPSSVLSKYQGESERALERVFMEAKAAAPSVIFLDEVDALASSRDTSDDLQGRRLLAELLLQMTALQPRD--RVTVLGATNRADFVDEALLRRFHSKILVEEPTKAERVQLLGHFLMGVKHSLEQRALEELAGQMAGWTGSDIQSLCKEAAMAPIRELSAKGVLAGFDTAEAAKALIRPVTLGDCKEALQELRVRVHTQGSQNTQE 1207
PG L +V SP RF+ I G +AK AL E VVLP ++R +F G R+ +L++G PGTGKT LA A A+E D FF + S++ SK+ G++E+ ++ +F A+ PS++F+DEVD++ S+R S+ RRL E L+Q + RV V+ ATNR +DEA+ RRF ++++ P RV+L+ H L G K SL R L A AG++GSD+ +L K+AAM PIR L A+ A ++ +RP+T+ D + +L+ +R V G Q +E
Sbjct: 13 PGVDKALANMILDEIVDNSPG--VRFADIAGVPEAKEALKEAVVLP-----SLRPDLFTGLRSPPKGVLLFGPPGTGKTLLAKALATECDCRFFNISASALTSKWVGQAEKLVKALFAVARHLEPSIVFIDEVDSVLSARSESEHEASRRLKTEFLVQFDGVSTTQEGRVIVVAATNRPQELDEAVRRRFTKRMMIPLPEHETRVELMKHLLKGQKASLSTRDLSVAADMTAGFSGSDVAALVKDAAMGPIRSLGAR-------VANVKESEVRPITMQDMQASLKSVRASV---GEQQVRE 297 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_969.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_969.4.1 >prot_C-australica_Contig_969.4.1 ID=prot_C-australica_Contig_969.4.1|Name=mRNA_C-australica_Contig_969.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=401bp MALIALLNRSTSLVRSGIGCCRCQDGTQGSCSACLEALVGARALLQFAMGback to top mRNA from alignment at C-australica_Contig_969:4533..8434+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_969.4.1 ID=mRNA_C-australica_Contig_969.4.1|Name=mRNA_C-australica_Contig_969.4.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3902bp|location=Sequence derived from alignment at C-australica_Contig_969:4533..8434+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_969:4533..8434+ >mRNA_C-australica_Contig_969.4.1 ID=mRNA_C-australica_Contig_969.4.1|Name=mRNA_C-australica_Contig_969.4.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1203bp|location=Sequence derived from alignment at C-australica_Contig_969:4533..8434+ (Chrysoparadoxa australica CS_1217)back to top |