mRNA_C-australica_Contig_968.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_968.1.1
Unique NamemRNA_C-australica_Contig_968.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
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BLAST of mRNA_C-australica_Contig_968.1.1 vs. uniprot
Match: A0A0A0RTZ6_SACJA (Phosphomannomutase n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A0A0RTZ6_SACJA)

HSP 1 Score: 350 bits (899), Expect = 8.590e-120
Identity = 164/232 (70.69%), Postives = 200/232 (86.21%), Query Frame = 1 
Query:    1 LSAPRLEATPEVHQFVKQLREKITIGVVGGSDLVKQREQLGQTVTDDFDYSFSENGLVGYKHGKLLTSQSLQAELGEDNLKEIINWVLRYISELDIPIKRGTFIEFRTGMMNISPIGRNCSREERNEFERYDKIHNIRPTMVAAMREKFGHLNLTFSIGGQISFDLFPTGWDKTYCLQFLPE--TEFDTIHFFGDKTFKGGNDHEIFEHPRTIGHTVTSPEETMAICKELFW 690
            L+A R E  P++ +F+K LRE+ITIGVVGGSDL KQ+EQLG++V +D+DYSFS+NGLV YK G+L+  Q++   +GE+NLK+IINWVL+Y+S +DIP+KRGTFIEFRTGM+NISP+GRNCS+EER+ FE+YD +H IR TMVAAMRE+F  LNLTFSIGGQISFDLFPTGWDKT+CLQFL E   E+D IHFFGDKTFKGGND+EIFE  RTIGHTVTSP +T+  CKELF+
Sbjct:   19 LTAARKEVLPDMVEFIKTLRERITIGVVGGSDLPKQKEQLGESVMEDYDYSFSQNGLVAYKAGELIGQQTISKHVGEENLKKIINWVLKYMSGIDIPVKRGTFIEFRTGMLNISPVGRNCSQEERDAFEQYDNVHKIRETMVAAMREEFADLNLTFSIGGQISFDLFPTGWDKTFCLQFLGEGTAEYDEIHFFGDKTFKGGNDNEIFESERTIGHTVTSPADTIQQCKELFF 250
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BLAST of mRNA_C-australica_Contig_968.1.1 vs. uniprot
Match: PMM_ORYSI (Phosphomannomutase n=12 Tax=Oryzeae TaxID=147380 RepID=PMM_ORYSI)

HSP 1 Score: 348 bits (892), Expect = 8.680e-119
Identity = 163/231 (70.56%), Postives = 199/231 (86.15%), Query Frame = 1 
Query:    1 LSAPRLEATPEVHQFVKQLREKITIGVVGGSDLVKQREQLGQTVTDDFDYSFSENGLVGYKHGKLLTSQSLQAELGEDNLKEIINWVLRYISELDIPIKRGTFIEFRTGMMNISPIGRNCSREERNEFERYDKIHNIRPTMVAAMREKFGHLNLTFSIGGQISFDLFPTGWDKTYCLQFLPETEFDTIHFFGDKTFKGGNDHEIFEHPRTIGHTVTSPEETMAICKELFWS 693
            L+APR   TPE+ QF+KQLRE +T+GVVGGSDLVK  EQLG++VT D+DY FSENGLV +K+G+L+ +QSL++ LG+D LKE IN+ L YI++LDIPIKRGTFIEFR+GM+N+SPIGRNCS+EER+EFE+YDK+HNIRP MV+ +REKF HLNLTFSIGGQISFD+FP GWDKTYCL++L E  F  IHFFGDKT+KGGND+EIFE  RTIGHTVTSP++T   C+ LF S
Sbjct:   19 LTAPRKVVTPEMLQFMKQLREHVTVGVVGGSDLVKISEQLGKSVTTDYDYCFSENGLVAHKNGELIGTQSLKSFLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEE--FQEIHFFGDKTYKGGNDYEIFESDRTIGHTVTSPDDTAEQCRSLFMS 247
[Close]
BLAST of mRNA_C-australica_Contig_968.1.1 vs. uniprot
Match: PMM_WHEAT (Phosphomannomutase n=28 Tax=Pooideae TaxID=147368 RepID=PMM_WHEAT)

HSP 1 Score: 346 bits (887), Expect = 5.180e-118
Identity = 160/231 (69.26%), Postives = 197/231 (85.28%), Query Frame = 1 
Query:    1 LSAPRLEATPEVHQFVKQLREKITIGVVGGSDLVKQREQLGQTVTDDFDYSFSENGLVGYKHGKLLTSQSLQAELGEDNLKEIINWVLRYISELDIPIKRGTFIEFRTGMMNISPIGRNCSREERNEFERYDKIHNIRPTMVAAMREKFGHLNLTFSIGGQISFDLFPTGWDKTYCLQFLPETEFDTIHFFGDKTFKGGNDHEIFEHPRTIGHTVTSPEETMAICKELFWS 693
            L+APR E TPE+ +F+K+LRE +T+GVVGGSDLVK  EQLG++V  D+DY FSENGLV +K GKL+ +QSL+  LG+D LKE IN+ L YI++LDIPIKRGTFIEFR+GM+N+SPIGRNCS+EER++FE+YDK+HN+RP MV+ +REKF HLNLTFSIGGQISFD+FP GWDKTYCL++L E  F  IHFFGDKT+KGGNDHEIFE  RT+GHTVTSP +T+  CK +F S
Sbjct:   20 LTAPRKEVTPEMLEFMKRLRENVTVGVVGGSDLVKISEQLGKSVITDYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMINVSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEE--FKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPNDTVQQCKSIFLS 248
[Close]
BLAST of mRNA_C-australica_Contig_968.1.1 vs. uniprot
Match: C8CK09_WHEAT (Phosphomannomutase n=5 Tax=Triticinae TaxID=1648030 RepID=C8CK09_WHEAT)

HSP 1 Score: 346 bits (887), Expect = 5.760e-118
Identity = 160/231 (69.26%), Postives = 197/231 (85.28%), Query Frame = 1 
Query:    1 LSAPRLEATPEVHQFVKQLREKITIGVVGGSDLVKQREQLGQTVTDDFDYSFSENGLVGYKHGKLLTSQSLQAELGEDNLKEIINWVLRYISELDIPIKRGTFIEFRTGMMNISPIGRNCSREERNEFERYDKIHNIRPTMVAAMREKFGHLNLTFSIGGQISFDLFPTGWDKTYCLQFLPETEFDTIHFFGDKTFKGGNDHEIFEHPRTIGHTVTSPEETMAICKELFWS 693
            L+APR E TPE+ +F+K+LRE +T+GVVGGSDLVK  EQLG++V  D+DY FSENGLV +K GKL+ +QSL+  LG+D LKE IN+ L YI++LDIPIKRGTFIEFR+GM+N+SPIGRNCS+EER++FE+YDK+HN+RP MV+ +REKF HLNLTFSIGGQISFD+FP GWDKTYCL++L E  F  IHFFGDKT+KGGNDHEIFE  RT+GHTVTSP +T+  CK +F S
Sbjct:   23 LTAPRKEVTPEMLEFMKRLRENVTVGVVGGSDLVKISEQLGKSVITDYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMINVSPIGRNCSQEERDDFEKYDKVHNVRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLEE--FKEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPNDTVQQCKSIFLS 251
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BLAST of mRNA_C-australica_Contig_968.1.1 vs. uniprot
Match: A0A2I4GNB6_JUGRE (Phosphomannomutase n=6 Tax=fabids TaxID=91835 RepID=A0A2I4GNB6_JUGRE)

HSP 1 Score: 345 bits (886), Expect = 7.110e-118
Identity = 161/229 (70.31%), Postives = 199/229 (86.90%), Query Frame = 1 
Query:    1 LSAPRLEATPEVHQFVKQLREKITIGVVGGSDLVKQREQLGQTVTDDFDYSFSENGLVGYKHGKLLTSQSLQAELGEDNLKEIINWVLRYISELDIPIKRGTFIEFRTGMMNISPIGRNCSREERNEFERYDKIHNIRPTMVAAMREKFGHLNLTFSIGGQISFDLFPTGWDKTYCLQFLPETEFDTIHFFGDKTFKGGNDHEIFEHPRTIGHTVTSPEETMAICKELF 687
            L+APR  ATP++ +F+++LR+ +T+GVVGGSDL K  EQLG+TVTDD+DY FSENGLV +K GKL+ +QSL++ LG+D LKE IN+ L YI++LDIPIKRGTFIEFR+GM+N+SPIGRNCS+EER+EFE+YDK+ NIRP MV+ +REKF HLNLTFSIGGQISFD+FP GWDKTYCL++L +  F  IHFFGDKT+KGGNDHEI+E  RTIGHTVTSPE+TM +CK LF
Sbjct:   18 LTAPRKVATPKMVEFMQELRKVVTVGVVGGSDLSKISEQLGKTVTDDYDYVFSENGLVAHKDGKLIGTQSLKSFLGDDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVQNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FHEIHFFGDKTYKGGNDHEIYESERTIGHTVTSPEDTMEMCKTLF 244
[Close]
BLAST of mRNA_C-australica_Contig_968.1.1 vs. uniprot
Match: A0A7N2MCN5_QUELO (Phosphomannomutase n=5 Tax=Fagales TaxID=3502 RepID=A0A7N2MCN5_QUELO)

HSP 1 Score: 345 bits (884), Expect = 1.430e-117
Identity = 160/229 (69.87%), Postives = 199/229 (86.90%), Query Frame = 1 
Query:    1 LSAPRLEATPEVHQFVKQLREKITIGVVGGSDLVKQREQLGQTVTDDFDYSFSENGLVGYKHGKLLTSQSLQAELGEDNLKEIINWVLRYISELDIPIKRGTFIEFRTGMMNISPIGRNCSREERNEFERYDKIHNIRPTMVAAMREKFGHLNLTFSIGGQISFDLFPTGWDKTYCLQFLPETEFDTIHFFGDKTFKGGNDHEIFEHPRTIGHTVTSPEETMAICKELF 687
            L+APR  ATP++ +F++QLRE +T+GVVGGSDL+K  EQLG+TV DD+DY+FSENGLV +K GKL+ ++SL++ LGE+ LKEIIN+ L Y+++LDIPIKRGTFIE R+GM+NISPIGRNCS+EER+EFE+YDK+HN R  M++A+REKF HLNLTFSIGGQISFD+FP GWDKTYCL++L +  F  IHFFGDKT+KGGNDHEI+E  RTIGHTVTSPE+TM  CK LF
Sbjct:   18 LTAPRKVATPKILEFMRQLREVVTVGVVGGSDLLKISEQLGKTVIDDYDYAFSENGLVAHKDGKLIGTESLKSFLGEEKLKEIINFTLHYLADLDIPIKRGTFIELRSGMLNISPIGRNCSQEERDEFEKYDKVHNFRAKMISALREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FHEIHFFGDKTYKGGNDHEIYESKRTIGHTVTSPEDTMEQCKALF 244
[Close]
BLAST of mRNA_C-australica_Contig_968.1.1 vs. uniprot
Match: A0A067HDT6_CITSI (Phosphomannomutase n=3 Tax=Citrus TaxID=2706 RepID=A0A067HDT6_CITSI)

HSP 1 Score: 345 bits (884), Expect = 1.430e-117
Identity = 162/229 (70.74%), Postives = 198/229 (86.46%), Query Frame = 1 
Query:    1 LSAPRLEATPEVHQFVKQLREKITIGVVGGSDLVKQREQLGQTVTDDFDYSFSENGLVGYKHGKLLTSQSLQAELGEDNLKEIINWVLRYISELDIPIKRGTFIEFRTGMMNISPIGRNCSREERNEFERYDKIHNIRPTMVAAMREKFGHLNLTFSIGGQISFDLFPTGWDKTYCLQFLPETEFDTIHFFGDKTFKGGNDHEIFEHPRTIGHTVTSPEETMAICKELF 687
            L+APR  ATP++ +F+++LR+ +T+GVVGGSDL K  EQLG+TV D++DY FSENGLV +K GKL+ +QSL++ LG + LKE IN+ L YI++LDIPIKRGTFIEFR+GM+NISPIGRNCS+EER+EFERYDKIHNIRP MV+ +REKF HLNLTFSIGGQISFD+FP GWDKTYCL++L +  F+ IHFFGDKT+KGGNDHEIFE  RT+GHTVTSPE+TM  CK LF
Sbjct:   18 LTAPRKAATPQMLEFMRELRKVVTVGVVGGSDLSKISEQLGKTVIDEYDYVFSENGLVAHKDGKLIGTQSLKSFLGGEKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYLDD--FNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALF 244
[Close]
BLAST of mRNA_C-australica_Contig_968.1.1 vs. uniprot
Match: C8CK10_WHEAT (Phosphomannomutase n=13 Tax=Triticeae TaxID=147389 RepID=C8CK10_WHEAT)

HSP 1 Score: 345 bits (884), Expect = 1.590e-117
Identity = 159/231 (68.83%), Postives = 198/231 (85.71%), Query Frame = 1 
Query:    1 LSAPRLEATPEVHQFVKQLREKITIGVVGGSDLVKQREQLGQTVTDDFDYSFSENGLVGYKHGKLLTSQSLQAELGEDNLKEIINWVLRYISELDIPIKRGTFIEFRTGMMNISPIGRNCSREERNEFERYDKIHNIRPTMVAAMREKFGHLNLTFSIGGQISFDLFPTGWDKTYCLQFLPETEFDTIHFFGDKTFKGGNDHEIFEHPRTIGHTVTSPEETMAICKELFWS 693
            L+APR E TPE+ +F+K+LRE +T+GVVGGSDLVK  EQLG++V  D+DY FSENGLV +K GKL+ +QSL+  LG+D LKE IN+ L YI++LDIPIKRGTFIEFR+GM+N+SPIGRNCS+EER++FE+YDK+HN+RP MV+ +REKF HLNLTFSIGGQISFD+FP GWDKTYCL++L E  F  IHFFGDKT+KGGNDHEIFE  RT+GHTVTSP++T+  C+ +F S
Sbjct:   22 LTAPRKEVTPEMLEFMKRLRENVTVGVVGGSDLVKISEQLGKSVITDYDYVFSENGLVAHKDGKLIGTQSLKTYLGDDQLKEFINFTLHYIADLDIPIKRGTFIEFRSGMINVSPIGRNCSQEERDDFEKYDKVHNVRPKMVSMLREKFAHLNLTFSIGGQISFDVFPHGWDKTYCLRYLDE--FKEIHFFGDKTYKGGNDHEIFESDRTVGHTVTSPDDTVQQCRSIFLS 250
[Close]
BLAST of mRNA_C-australica_Contig_968.1.1 vs. uniprot
Match: V4LHH7_EUTSA (Phosphomannomutase n=3 Tax=Brassicaceae TaxID=3700 RepID=V4LHH7_EUTSA)

HSP 1 Score: 344 bits (883), Expect = 1.900e-117
Identity = 161/231 (69.70%), Postives = 198/231 (85.71%), Query Frame = 1 
Query:    1 LSAPRLEATPEVHQFVKQLREKITIGVVGGSDLVKQREQLGQTVTDDFDYSFSENGLVGYKHGKLLTSQSLQAELGEDNLKEIINWVLRYISELDIPIKRGTFIEFRTGMMNISPIGRNCSREERNEFERYDKIHNIRPTMVAAMREKFGHLNLTFSIGGQISFDLFPTGWDKTYCLQFLPETEFDTIHFFGDKTFKGGNDHEIFEHPRTIGHTVTSPEETMAICKELFWS 693
            L+APR EAT E+  F+++LR+ +T+GVVGGSDL+K  EQLG+TVT+D+DY FSENGLV +K GK +  QSL+  LGED LKE+IN+ L YI++LDIPIKRGTFIEFR GM+N+SPIGRNCS+EER+EFERYDK+ NIRP MVA +RE+F HLNLTFSIGGQISFD+FP GWDKTYCLQ+L +  F+ IHFFGDKT++GGND+EI+E P+TIGH+VTSP +TMA CK LF S
Sbjct:   18 LTAPRKEATQELLDFIRELRKVVTVGVVGGSDLIKISEQLGKTVTNDYDYCFSENGLVAHKDGKSIGIQSLKLYLGEDKLKELINFTLHYIADLDIPIKRGTFIEFRNGMLNVSPIGRNCSQEERDEFERYDKVQNIRPKMVAELRERFAHLNLTFSIGGQISFDVFPKGWDKTYCLQYLED--FNEIHFFGDKTYEGGNDYEIYESPKTIGHSVTSPNDTMAKCKALFMS 246
[Close]
BLAST of mRNA_C-australica_Contig_968.1.1 vs. uniprot
Match: PMM_ARATH (Phosphomannomutase n=10 Tax=Brassicaceae TaxID=3700 RepID=PMM_ARATH)

HSP 1 Score: 344 bits (883), Expect = 1.900e-117
Identity = 161/231 (69.70%), Postives = 198/231 (85.71%), Query Frame = 1 
Query:    1 LSAPRLEATPEVHQFVKQLREKITIGVVGGSDLVKQREQLGQTVTDDFDYSFSENGLVGYKHGKLLTSQSLQAELGEDNLKEIINWVLRYISELDIPIKRGTFIEFRTGMMNISPIGRNCSREERNEFERYDKIHNIRPTMVAAMREKFGHLNLTFSIGGQISFDLFPTGWDKTYCLQFLPETEFDTIHFFGDKTFKGGNDHEIFEHPRTIGHTVTSPEETMAICKELFWS 693
            L+APR EATPE+  F+++LR+ +TIGVVGGSDL K  EQLG+TVT+D+DY FSENGLV +K GK +  QSL+  LG+D LKE+IN+ L YI++LDIPIKRGTFIEFR GM+N+SPIGRNCS+EER+EFERYDK+ NIRP MVA +RE+F HLNLTFSIGGQISFD+FP GWDKTYCLQ+L +  F  IHFFGDKT++GGND+EI+E P+TIGH+VTSP++T+A CK LF S
Sbjct:   18 LTAPRKEATPELLDFIRELRKVVTIGVVGGSDLSKISEQLGKTVTNDYDYCFSENGLVAHKDGKSIGIQSLKLHLGDDKLKELINFTLHYIADLDIPIKRGTFIEFRNGMLNVSPIGRNCSQEERDEFERYDKVQNIRPKMVAELRERFAHLNLTFSIGGQISFDVFPKGWDKTYCLQYLED--FSEIHFFGDKTYEGGNDYEIYESPKTIGHSVTSPDDTVAKCKALFMS 246
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_968.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A0RTZ6_SACJA8.590e-12070.69Phosphomannomutase n=2 Tax=Phaeophyceae TaxID=2870... [more]
PMM_ORYSI8.680e-11970.56Phosphomannomutase n=12 Tax=Oryzeae TaxID=147380 R... [more]
PMM_WHEAT5.180e-11869.26Phosphomannomutase n=28 Tax=Pooideae TaxID=147368 ... [more]
C8CK09_WHEAT5.760e-11869.26Phosphomannomutase n=5 Tax=Triticinae TaxID=164803... [more]
A0A2I4GNB6_JUGRE7.110e-11870.31Phosphomannomutase n=6 Tax=fabids TaxID=91835 RepI... [more]
A0A7N2MCN5_QUELO1.430e-11769.87Phosphomannomutase n=5 Tax=Fagales TaxID=3502 RepI... [more]
A0A067HDT6_CITSI1.430e-11770.74Phosphomannomutase n=3 Tax=Citrus TaxID=2706 RepID... [more]
C8CK10_WHEAT1.590e-11768.83Phosphomannomutase n=13 Tax=Triticeae TaxID=147389... [more]
V4LHH7_EUTSA1.900e-11769.70Phosphomannomutase n=3 Tax=Brassicaceae TaxID=3700... [more]
PMM_ARATH1.900e-11769.70Phosphomannomutase n=10 Tax=Brassicaceae TaxID=370... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_968contigC-australica_Contig_968:155..1739 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2711.XP_006491053.1
Preferred namePMM
PFAMsPMM
Model size748
Max annot lvl35493|Streptophyta
KEGG rclassRC00408
KEGG koko:K17497
KEGG ReactionR01818
KEGG Pathwayko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130
KEGG ModuleM00114
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006013,GO:0006082,GO:0006464,GO:0006486,GO:0006487,GO:0006605,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006970,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009108,GO:0009110,GO:0009628,GO:0009651,GO:0009987,GO:0015031,GO:0015833,GO:0016051,GO:0016053,GO:0016853,GO:0016866,GO:0016868,GO:0019318,GO:0019538,GO:0019752,GO:0019852,GO:0019853,GO:0033036,GO:0033365,GO:0034613,GO:0034645,GO:0036211,GO:0042364,GO:0042886,GO:0043170,GO:0043412,GO:0043413,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045047,GO:0045184,GO:0046364,GO:0046394,GO:0046907,GO:0050896,GO:0051179,GO:0051186,GO:0051188,GO:0051234,GO:0051641,GO:0051649,GO:0070085,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072599,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
Exons8
Evalue8.86e-66
EggNOG OGsCOG0561@1|root,KOG3189@2759|Eukaryota,37JBP@33090|Viridiplantae,3G95V@35493|Streptophyta
Ec32 ortholog descriptionHAD domain protein
Ec32 orthologEc-08_004630.1
EC5.4.2.8
Descriptionin the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions
Cds size372
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_968.1.1prot_C-australica_Contig_968.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_968 866..1690 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588833.6713095-UTR-C-australica_Contig_968:154..2431682588833.6713095-UTR-C-australica_Contig_968:154..243Chrysoparadoxa australica CS_1217UTRC-australica_Contig_968 155..243 +
1682588833.6823022-UTR-C-australica_Contig_968:323..3641682588833.6823022-UTR-C-australica_Contig_968:323..364Chrysoparadoxa australica CS_1217UTRC-australica_Contig_968 324..364 +
1682588833.690872-UTR-C-australica_Contig_968:443..5201682588833.690872-UTR-C-australica_Contig_968:443..520Chrysoparadoxa australica CS_1217UTRC-australica_Contig_968 444..520 +
1682588833.7022922-UTR-C-australica_Contig_968:621..7131682588833.7022922-UTR-C-australica_Contig_968:621..713Chrysoparadoxa australica CS_1217UTRC-australica_Contig_968 622..713 +
1682588833.7136698-UTR-C-australica_Contig_968:837..8651682588833.7136698-UTR-C-australica_Contig_968:837..865Chrysoparadoxa australica CS_1217UTRC-australica_Contig_968 838..865 +
1682588833.7607546-UTR-C-australica_Contig_968:1690..17391682588833.7607546-UTR-C-australica_Contig_968:1690..1739Chrysoparadoxa australica CS_1217UTRC-australica_Contig_968 1691..1739 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682588833.7266636-CDS-C-australica_Contig_968:865..9371682588833.7266636-CDS-C-australica_Contig_968:865..937Chrysoparadoxa australica CS_1217CDSC-australica_Contig_968 866..937 +
1682588833.7344272-CDS-C-australica_Contig_968:1159..12671682588833.7344272-CDS-C-australica_Contig_968:1159..1267Chrysoparadoxa australica CS_1217CDSC-australica_Contig_968 1160..1267 +
1682588833.7437155-CDS-C-australica_Contig_968:1421..15051682588833.7437155-CDS-C-australica_Contig_968:1421..1505Chrysoparadoxa australica CS_1217CDSC-australica_Contig_968 1422..1505 +
1682588833.7528386-CDS-C-australica_Contig_968:1582..16901682588833.7528386-CDS-C-australica_Contig_968:1582..1690Chrysoparadoxa australica CS_1217CDSC-australica_Contig_968 1583..1690 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_968.1.1

>prot_C-australica_Contig_968.1.1 ID=prot_C-australica_Contig_968.1.1|Name=mRNA_C-australica_Contig_968.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=124bp
MMNISPIGRNCSREERNEFERYDKIHNIRPTMVAAMREKFGHLNLTFSIG
GQISFDLFPTGWDKTYCLQFLPETEFDTIHFFGDKTFKGGNDHEIFEHPR
TIGHTVTSPEETMAICKELFWSS*
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mRNA from alignment at C-australica_Contig_968:155..1739+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_968.1.1 ID=mRNA_C-australica_Contig_968.1.1|Name=mRNA_C-australica_Contig_968.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1585bp|location=Sequence derived from alignment at C-australica_Contig_968:155..1739+ (Chrysoparadoxa australica CS_1217)
CTCTCAGCACCGCGCCTTGAGGCCACCCCAGAGGTGCATCAGTTCGTGAA
GCAGCTAAGGGAGAAGATCACGATTGGGGTCGTAGGAGGGTAAGTACTCT
GCCCAAGTCCAATGGATTTGCAGCTAGCTGACCATTAGCCCCCCTCTTGC
CCTATCCCTGCCTCTACAGGTCTGACCTTGTGAAGCAAAGGGAGCAACTT
GGTCAAACAGGTGATCAGGCATCTGGCCCGCAGCCCTTGCAATCCCTACA
CCAACCCCACTTCCCCCCCCATGTGCTTGCTATGTACAGTTACAGATGAC
TTTGACTACAGCTTCTCGGAGAATGGGCTTGTGGGGTACAAGCACGGCAA
GCTGCTTACAAGTCAAGTACGCCCCAGCCAGCCATAGTCACCAAGTATCA
TGATTCGTCGGGAGGTTGTGACAAGTCATTGGACAGCTCCTGACTCTTTA
TTCCCTCGCCAACTCAGAGCCTCCAGGCTGAACTGGGTGAGGACAACCTT
AAGGAGATCATTAACTGGGTCCTGCGCTACATCTCAGAGCTGGACATCCC
CATCAAGAGGTACCCCATGCTGTAGTCACCAGCTATGGATGGCCTTTGTC
ATGGATGAGTCGGGGCAAGTGGGAATGAGAATGTTTGTGCTGCCTCTAAG
ATAGGAATTCCTACCCTGTTGCTCACTCACCAGGGGGACCTTCATAGAGT
TTCGAACCGGCATGATGAACATATCACCCATCGGCCGTAACTGCAGCAGA
GAGGAGAGGAATGAGTTTGAAAGATACGATAAGGTGGCTAGCAATGCTGC
TATTCTGTCTTGTCTTGGTCAAGCCTGGTGCCCTTTATCCAGCCACAAGT
CACTTGCTTACTGCTTGTCAGATTTTTATGTTCTCTTCTCGTATTCCCCA
CACTACATGCATGGCCCCTGCCACTCCGTACACGTTTCAGCTGACTCTCT
CCAAATGCCAGCTAACTCATTTAGGAGCTCACACGTATGTGCCTTTTCCC
CGCAGATACATAATATTCGGCCGACCATGGTGGCAGCAATGCGTGAAAAG
TTTGGGCATCTTAACCTAACCTTCTCCATTGGGGGGCAAATATCATTTGA
TCTCTTCCCGACGGTGAGTCAGCCGTGGCATTTTGCATCACTTAACTTTT
CCATTACCACGTATCAAGCATACCCTTTCACCATTTCCTAGTCATACTGT
AGAGACCCTCTTCATACTCCATTTCCAGCAACATACGAGACTCCCTCATC
TTGCTCTGAACATACAGGGCTGGGATAAAACATACTGCCTTCAGTTCTTA
CCGGAAACAGAGTTTGACACCATCCACTTCTTTGGAGACAAGACCTTTAA
GGTACGCTGTGTACCCTGCCCTGCCCCCAAATGCCGCTATGAGACCTAAC
CACTTACTTTTGGGGGCCTCTGGAATAGGGTGGTAATGACCACGAGATCT
TTGAGCACCCCCGCACGATTGGCCACACAGTGACATCGCCAGAGGAGACG
ATGGCGATATGCAAGGAGCTCTTCTGGAGCAGCTAAATACTTCGAAGTAG
ATCTTTCGTTCGAAGGCAACCCAACCTTTCTTCCC
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Coding sequence (CDS) from alignment at C-australica_Contig_968:155..1739+

>mRNA_C-australica_Contig_968.1.1 ID=mRNA_C-australica_Contig_968.1.1|Name=mRNA_C-australica_Contig_968.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=372bp|location=Sequence derived from alignment at C-australica_Contig_968:155..1739+ (Chrysoparadoxa australica CS_1217)
ATGATGAACATATCACCCATCGGCCGTAACTGCAGCAGAGAGGAGAGGAA
TGAGTTTGAAAGATACGATAAGATACATAATATTCGGCCGACCATGGTGG
CAGCAATGCGTGAAAAGTTTGGGCATCTTAACCTAACCTTCTCCATTGGG
GGGCAAATATCATTTGATCTCTTCCCGACGGGCTGGGATAAAACATACTG
CCTTCAGTTCTTACCGGAAACAGAGTTTGACACCATCCACTTCTTTGGAG
ACAAGACCTTTAAGGGTGGTAATGACCACGAGATCTTTGAGCACCCCCGC
ACGATTGGCCACACAGTGACATCGCCAGAGGAGACGATGGCGATATGCAA
GGAGCTCTTCTGGAGCAGCTAA
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