mRNA_C-australica_Contig_9.9.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: D7FVV6_ECTSI (Prohibitin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV6_ECTSI) HSP 1 Score: 387 bits (994), Expect = 2.750e-133 Identity = 206/273 (75.46%), Postives = 240/273 (87.91%), Query Frame = 1 Query: 28 DKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQNQSMLLGLNNA 846 +K L+ V++ G +VA +AA + CL+NVD GQR VIFDRF GVK+ V GEGTHF+IP +Q PII+DVRARPR INS+TGTKDLQMANISLRVLSRP E ELP+IY++LGTDFDDRVLPS+GNEVLKAVVAKYNAEELLSKRE+VS R+R E+T RAK F+LI+DD+SITHLTFG EFTKAIENKQVAQQEAERQVYVVA S+QE+ AAIIRAEGEAEAA LIS ALK+SG+GLIEVRRID AK++A TLA++RN+TYLP+G +MLLGLN A Sbjct: 3 EKLLQNVSRLGGVVAIAAAT-EMCLFNVDGGQRAVIFDRFQGVKEAVVGEGTHFMIPIVQKPIIIDVRARPRTINSITGTKDLQMANISLRVLSRPLESELPRIYQELGTDFDDRVLPSLGNEVLKAVVAKYNAEELLSKRESVSTRIRDELTHRAKQFHLIMDDVSITHLTFGHEFTKAIENKQVAQQEAERQVYVVALSDQERLAAIIRAEGEAEAAELISAALKESGIGLIEVRRIDTAKEIALTLATSRNITYLPTGGGSNMLLGLNTA 274
BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: A0A835Z1F2_9STRA (Prohibitin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1F2_9STRA) HSP 1 Score: 384 bits (987), Expect = 3.430e-132 Identity = 208/268 (77.61%), Postives = 232/268 (86.57%), Query Frame = 1 Query: 28 DKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQNQSMLL 831 D+ L A + G +VA +AA+ CLY VD G+R VIFDR +GVKDDV GEGTHFLIPG+QTPIIMDVR R RVINSVTGTKDLQ ANISLRVLSRPDE +L I+KQLG D+DDRVLPS+GNEVLKAVVAKYNAEELLSKRE VS +VR+EI ARAK FNLILDD+SITHLTFGREFTKAIENKQVAQQEAERQVY+V KSEQE+QAA+IRAEGEAEAA LIS ALK SG GLIEVRRIDAAK++AETLA+ R VTYLP+GQ + +L Sbjct: 3 DRLLSAATRVGVLVAGAAAV-DLCLYTVDGGERAVIFDRLAGVKDDVVGEGTHFLIPGLQTPIIMDVRDRARVINSVTGTKDLQTANISLRVLSRPDEAKLALIFKQLGQDYDDRVLPSLGNEVLKAVVAKYNAEELLSKRETVSHQVREEIMARAKQFNLILDDVSITHLTFGREFTKAIENKQVAQQEAERQVYLVQKSEQERQAAVIRAEGEAEAADLISNALKSSGSGLIEVRRIDAAKEIAETLANGRGVTYLPAGQGGANML 269
BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: A0A7S2XWM3_9STRA (Prohibitin n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWM3_9STRA) HSP 1 Score: 348 bits (892), Expect = 9.540e-118 Identity = 186/274 (67.88%), Postives = 223/274 (81.39%), Query Frame = 1 Query: 28 DKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQN--QSMLLGLNN 843 ++ L + + G + +FCL VD GQR VIFD+F G+ D GEG HFLIP IQ P I+D+RARPRVINSVTGTKDLQM NISLRVLSRP+E ++ I++ LGTDFD+RVLPS+GNEVLKA+VA+YNAE+LL KR+ VSE++R+ + RA FNLILDD+SITHLTFGRE+ KAIE+KQVAQQEAERQ YVVAK++QE++AAIIRAEGEAEAA LISKAL SG GLIEVRRIDAA++VAE LA+AR VTYLP GQ Q++LLGLNN Sbjct: 3 ERVLGLLTKIGLAATAGGVVVKFCLVTVDGGQRAVIFDKFKGILPDSCGEGMHFLIPIIQEPHILDIRARPRVINSVTGTKDLQMVNISLRVLSRPEEDKISHIFRTLGTDFDERVLPSLGNEVLKAIVAQYNAEDLLRKRDEVSEKIREALRKRAGAFNLILDDVSITHLTFGREYAKAIESKQVAQQEAERQQYVVAKADQERKAAIIRAEGEAEAATLISKALAGSGSGLIEVRRIDAAREVAENLAAARGVTYLPGGQGGGQNILLGLNN 276
BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: F0Y523_AURAN (Prohibitin n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y523_AURAN) HSP 1 Score: 339 bits (870), Expect = 2.330e-114 Identity = 188/275 (68.36%), Postives = 220/275 (80.00%), Query Frame = 1 Query: 25 MDKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQNQ---SMLLGLN 840 M+K L VA+ G VA + IG CLYNV+ G R V+FD GV EGT F IP +QTPIIMD+R+RPR I SVTGTKDLQM NI LRVLSRP E+ LPKIY LGT+FDDRVLPS+GNEVLK+VVA+YNA++LLS RE +S+++R +T RA+ FNLILDD+SITHL FG+EFT AIE KQVAQQEAERQ YVVAK+EQEK+AAIIRAEGEAEAA ISKAL+ G GLIEVRRIDAA++VAETL+ AR VTYLPSG ++ +MLLGLN Sbjct: 1 MEKVLTGVARLGMGVAGVSFIGSNCLYNVEGGHRAVMFDNIRGVLPKPISEGTGFKIPVLQTPIIMDIRSRPREIKSVTGTKDLQMVNIYLRVLSRPREEALPKIYMTLGTNFDDRVLPSLGNEVLKSVVAQYNADQLLSMREQISQQIRSTLTKRAEAFNLILDDVSITHLVFGKEFTSAIEQKQVAQQEAERQTYVVAKAEQEKKAAIIRAEGEAEAAATISKALEQCGSGLIEVRRIDAAREVAETLSRARGVTYLPSGGDKGGSNMLLGLN 275
BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: A0A7S0T017_9STRA (Prohibitin n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0T017_9STRA) HSP 1 Score: 332 bits (851), Expect = 1.620e-111 Identity = 175/245 (71.43%), Postives = 207/245 (84.49%), Query Frame = 1 Query: 97 CLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQNQSMLL 831 C+Y+VDAG R VIFD+ G++D V GEGTHF IP IQ PIIMD+R+RPR+INS TGTKDLQM NISLRVLSRP+E +LP IYK LG DFDDR+LPS+GNEVLKAVVA+YNAEELLSKR +VS ++R E+ RA FNLILDD+SITHLTFG EF KAIE+KQVAQQEAE Q Y+VAK++QE++AAII AEGEAEAA +ISKA+ +G GL+EVRRIDAAK+VA TLA RNV YLP+G++ S L Sbjct: 25 CIYDVDAGTRAVIFDKVRGIQDKVVGEGTHFKIPIIQDPIIMDIRSRPRIINSSTGTKDLQMVNISLRVLSRPNESKLPLIYKTLGIDFDDRILPSLGNEVLKAVVAQYNAEELLSKRAHVSLQIRTELLERASKFNLILDDVSITHLTFGTEFAKAIEHKQVAQQEAETQAYLVAKADQERKAAIILAEGEAEAANMISKAMSAAGNGLVEVRRIDAAKEVAGTLAKGRNVIYLPNGKDGSNFL 269
BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: A0A7S3M2D1_9STRA (Prohibitin n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2D1_9STRA) HSP 1 Score: 323 bits (829), Expect = 3.670e-108 Identity = 179/274 (65.33%), Postives = 214/274 (78.10%), Query Frame = 1 Query: 40 RAVAQAGTIVATSAAIG---QFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPS---GQNQSMLLGLNN 843 R V A TI S G +F Y+VDAG R VIFD+ G++ V GEGTHF IP IQ PIIMD+R+RPR I+SVTGTKDLQM NISLRVLSRP E +L IY+ LGTDFDDRVLPS+GNEVLK+VVA+YNAEELLSKR VS +R+ + RA FNLILDD+SITHLTFG+EF +AIE+KQVAQQEAE Q YVVAK++QE++AA+IRAEGEAEAA LIS+A+ +G GLIEVRRID AK VA+ ++ +RN+TYLPS G N + +G NN Sbjct: 3 RIVGAASTIAMASVVTGIAIEFFTYDVDAGNRAVIFDKIQGIQQTVKGEGTHFKIPFIQVPIIMDIRSRPRSIHSVTGTKDLQMVNISLRVLSRPKEDQLATIYQTLGTDFDDRVLPSLGNEVLKSVVAQYNAEELLSKRALVSHGIREALVERAAKFNLILDDVSITHLTFGKEFARAIEHKQVAQQEAETQAYVVAKADQERKAAVIRAEGEAEAANLISEAMLKAGNGLIEVRRIDTAKDVAQIVSRSRNITYLPSSKGGSNMLLNVGGNN 276
BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: A0A7S3LRB7_9STRA (Prohibitin n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LRB7_9STRA) HSP 1 Score: 319 bits (817), Expect = 2.790e-106 Identity = 172/268 (64.18%), Postives = 212/268 (79.10%), Query Frame = 1 Query: 37 LRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQN-QSMLLGL 837 L VAQA V +GQ CLYNVD G+R VIF+RF GV+ GEGTH IP I P I D+R++PR+IN+ TGTKDLQM NI+LRVLSRPDE LPKI++ +G DFD+RVLPSIGNEVLKAVVA+YNA++LL+ RE VS ++ +T RAK+F+LILDD+SITHLTFG++FT A+E KQVA Q+AER +VV K+EQEK+ ++I AEGEAEAA LIS AL+ SG GLIEVRRIDA+K +AETLA +RNVTYLPSG+ +MLL + Sbjct: 10 LTRVAQAALGVGLVGFVGQECLYNVDGGERAVIFNRFRGVEPKTIGEGTHLRIPMIDYPNIFDIRSKPRIINTTTGTKDLQMVNIALRVLSRPDEAMLPKIFQDIGKDFDERVLPSIGNEVLKAVVAQYNADQLLTMREKVSAQINDTLTQRAKNFHLILDDVSITHLTFGKDFTIAVEAKQVALQDAERSKFVVMKAEQEKKVSVIEAEGEAEAAQLISAALQKSGRGLIEVRRIDASKDIAETLAKSRNVTYLPSGKGGNNMLLNI 277
BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: W7TLA3_9STRA (Prohibitin n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLA3_9STRA) HSP 1 Score: 318 bits (815), Expect = 4.740e-106 Identity = 165/271 (60.89%), Postives = 215/271 (79.34%), Query Frame = 1 Query: 25 MDKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQNQSMLLGL 837 M+ L VA+ G VA +A +G L+NV+ G R V+FDRF GV EGT +IP +Q+ + DVR++PRVINSVTGTKDLQ NISLRVLSRP E+ LP+I+ ++G DFD+RVLP +GNEVLKAVVA+YNAEELLSKRE +S+++R + RA+ F+LILDD+SITHLTF +EFTKAIE KQVA+Q+AERQ+Y+V +++QE++A +IRAEGEAEAA+ ISKA+ D G LIE+RRIDAA+ +A+ L+ +RN+TYLP GQN +LLGL Sbjct: 1 MEALLGRVAKLGAGVAGAAFVGNNFLFNVEGGHRAVVFDRFKGVLPKPLAEGTSIVIPVLQSAFLFDVRSKPRVINSVTGTKDLQHVNISLRVLSRPVEQMLPEIFSKIGQDFDERVLPGVGNEVLKAVVAQYNAEELLSKREQISDQIRVNLIKRAREFHLILDDVSITHLTFSKEFTKAIEQKQVAEQDAERQMYIVQRADQERKAVVIRAEGEAEAAMKISKAVADFGTALIEIRRIDAARDIADILSKSRNITYLPGGQNSGLLLGL 271
BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: M1V582_CYAM1 (Prohibitin n=2 Tax=Cyanidiaceae TaxID=265316 RepID=M1V582_CYAM1) HSP 1 Score: 318 bits (815), Expect = 6.220e-106 Identity = 164/276 (59.42%), Postives = 217/276 (78.62%), Query Frame = 1 Query: 4 GKSVPGKMDKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPSGQNQSMLL 831 G+ K+ K L A+ + ++ Q LY V+ G R VIF+RF+GV+ V GEGTH IP +Q PII DVR RPR I SVTGTKDLQM N++LRVLS+PD+++LP+IY +LG D+D+RVLPSIGNEVLKA+VA+YNAE+LL++RE VS ++R+ +TARAK F++ LDD+S+THLTFGREF +AIE KQVAQQEAER Y+VA +EQE+QAAI RAEGE+EAA L+S+AL++SG G I++RRI+AA+++AETL+ A NV YLP+ ++LL Sbjct: 5 GREAAAKLAKTLNTAAKYSIALGVLGSLLQTSLYTVEGGHRAVIFNRFTGVEQRVVGEGTHLRIPWVQKPIIYDVRTRPRTITSVTGTKDLQMVNLTLRVLSKPDKQQLPRIYSRLGVDYDERVLPSIGNEVLKAIVAQYNAEQLLTQREKVSRQIRETLTARAKSFDIELDDVSMTHLTFGREFAQAIEQKQVAQQEAERSRYIVAIAEQERQAAITRAEGESEAAALVSQALQESGAGFIQLRRIEAAREIAETLSKAPNVVYLPATHGTNILL 280
BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Match: A0A7S4EFZ4_9STRA (Prohibitin n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EFZ4_9STRA) HSP 1 Score: 316 bits (810), Expect = 3.450e-105 Identity = 171/266 (64.29%), Postives = 212/266 (79.70%), Query Frame = 1 Query: 79 AAIGQF----CLYNVDAGQRGVIFDRF-SGVKDDVAGEGTHFLIPGIQTPIIMDVRARPRVINSVTGTKDLQMANISLRVLSRPDEKELPKIYKQLGTDFDDRVLPSIGNEVLKAVVAKYNAEELLSKRENVSERVRQEITARAKHFNLILDDISITHLTFGREFTKAIENKQVAQQEAERQVYVVAKSEQEKQAAIIRAEGEAEAAVLISKALKDSGVGLIEVRRIDAAKQVAETLASARNVTYLPS-------GQNQSMLLGLN 840 A++G F C+YNVD GQR V+FD+ G+ DV+GEGTHFLIP IQ PII D+R +PR I SVTGTKDLQM NI LRVL RP E ELP+IY++LGTDFD+RVLPSIGNEVLK++VA+YNA ELLSKR VSER+R E+T RAK F+L DD++ITHLTFGREF AIE+KQVA QEAERQ +VV K+EQE+QA + RAEGEAEAA +I++A++ +G G+IEVRRIDAAK++A LA++RNV YLP+ G ++LLGL+ Sbjct: 16 ASVGAFTVNSCIYNVDGGQRAVMFDQLRGGILPDVSGEGTHFLIPMIQRPIIFDIRTKPREIPSVTGTKDLQMVNIKLRVLWRPTESELPQIYRELGTDFDERVLPSIGNEVLKSIVAQYNAVELLSKRAEVSERIRDEMTKRAKTFHLEFDDVAITHLTFGREFMTAIESKQVASQEAERQQWVVKKAEQERQAMVTRAEGEAEAATIITQAMEKTGNGIIEVRRIDAAKEIAGKLANSRNVVYLPNTGGSGGNGSGSNLLLGLD 281 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9.9.1 >prot_C-australica_Contig_9.9.1 ID=prot_C-australica_Contig_9.9.1|Name=mRNA_C-australica_Contig_9.9.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=275bp MDKALRAVAQAGTIVATSAAIGQFCLYNVDAGQRGVIFDRFSGVKDDVAGback to top mRNA from alignment at C-australica_Contig_9:29942..31430+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_9.9.1 ID=mRNA_C-australica_Contig_9.9.1|Name=mRNA_C-australica_Contig_9.9.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1489bp|location=Sequence derived from alignment at C-australica_Contig_9:29942..31430+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_9:29942..31430+ >mRNA_C-australica_Contig_9.9.1 ID=mRNA_C-australica_Contig_9.9.1|Name=mRNA_C-australica_Contig_9.9.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=825bp|location=Sequence derived from alignment at C-australica_Contig_9:29942..31430+ (Chrysoparadoxa australica CS_1217)back to top |