mRNA_C-australica_Contig_9.8.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_9.8.1 vs. uniprot
Match: A0A836C6N5_9STRA (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6N5_9STRA) HSP 1 Score: 272 bits (695), Expect = 2.280e-89 Identity = 126/157 (80.25%), Postives = 144/157 (91.72%), Query Frame = 1 Query: 199 SAKIAHPDAVFGVDTGIADVLPHRYPFALVDKVIHFEPGKRAVGVKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGMIALQAPVSDGQGVFFFAGVDGVKWKKPVVPGDVLVMEMQLDTWKEKFGIAKMSGKAYVDGKVALEVKSFTFALAKDK 669 S IAHP+A+F VD IA +LPHRYPFALVDKVI+FEPGKRAVG+KCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGG+IALQAP+SDG+G FFF GVDGVKW+KPVVPGDVLVME++L WK++FGIAKM+G+ YVDGK+A+EVK FTFAL +DK Sbjct: 12 SKGIAHPEAIFTVDEHIAKILPHRYPFALVDKVIYFEPGKRAVGIKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGIIALQAPISDGKGTFFFGGVDGVKWRKPVVPGDVLVMEVELTAWKQRFGIAKMAGRGYVDGKLAVEVKEFTFALVQDK 168
BLAST of mRNA_C-australica_Contig_9.8.1 vs. uniprot
Match: D7FWP0_ECTSI (Beta-hydroxyacyl-ACP dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWP0_ECTSI) HSP 1 Score: 261 bits (666), Expect = 4.840e-84 Identity = 124/163 (76.07%), Postives = 138/163 (84.66%), Query Frame = 1 Query: 175 PETTAASYSAKIAHPDAVFGVDTGIADVLPHRYPFALVDKVIHFEPGKRAVGVKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGMIALQAPVSDGQGVFFFAGVDGVKWKKPVVPGDVLVMEMQLDTWKEKFGIAKMSGKAYVDGKVALEVKSFTFALAK 663 P TA+ S IAHP+A+F V I VLPHRYPFALVDKV+HF PGK +G+KCITNNEPQFTGHFPD PIMPGVLQVEAMAQLGG+I LQ P SDGQG FFFAGVDGVKW+KPVVPGDVLVMEM+L WK +FG+AKM+GKAYVDG +AL+VK FTFALAK Sbjct: 68 PAPTASDISKGIAHPEAIFTVPENILKVLPHRYPFALVDKVLHFVPGKSIIGIKCITNNEPQFTGHFPDLPIMPGVLQVEAMAQLGGLICLQEPCSDGQGTFFFAGVDGVKWRKPVVPGDVLVMEMELVKWKPRFGLAKMTGKAYVDGVLALDVKEFTFALAK 230
BLAST of mRNA_C-australica_Contig_9.8.1 vs. uniprot
Match: A0A7R9UF58_9STRA (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UF58_9STRA) HSP 1 Score: 237 bits (604), Expect = 5.940e-75 Identity = 117/170 (68.82%), Postives = 140/170 (82.35%), Query Frame = 1 Query: 163 EEIDPETTAA-SYSAKIAHPDAVFGVDTGIADVLPHRYPFALVDKVIHFEPGKRAVGVKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGMIALQAPVSDGQGVFFFAGVDGVKWKKPVVPGDVLVMEMQLDTWKEKFGIAKMSGKAYVDGKVALEVKSFTFALAKDK 669 EE+ T A + SA + VF V+ IADVLPHRYPFALVDKV+ FE GKRAVG+KC+TNNEPQFTGHFPDRPIMPGVL +EAMAQLGG+IALQ P+SDG+G+FFFAG++GV+++KPVVPGDVLVMEM+L WK FGIAKM G A+ DGK A+ V+ FTFALAK++ Sbjct: 42 EEVTTSWTGAQAVSALTKGVETVFPVEK-IADVLPHRYPFALVDKVVEFEAGKRAVGIKCVTNNEPQFTGHFPDRPIMPGVLMIEAMAQLGGVIALQEPLSDGKGIFFFAGIEGVRFRKPVVPGDVLVMEMELVDWKPAFGIAKMKGTAFTDGKPAVVVQEFTFALAKEE 210
BLAST of mRNA_C-australica_Contig_9.8.1 vs. uniprot
Match: A0A7S2DJT4_9DINO (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=2 Tax=Alexandrium TaxID=2924 RepID=A0A7S2DJT4_9DINO) HSP 1 Score: 232 bits (592), Expect = 1.820e-73 Identity = 108/141 (76.60%), Postives = 125/141 (88.65%), Query Frame = 1 Query: 244 GIADVLPHRYPFALVDKVIHFEPGKRAVGVKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGMIALQAPVSDGQGVFFFAGVDGVKWKKPVVPGDVLVMEMQLDTWKEKFGIAKMSGKAYVDGKVALEVKSFTFALAKD 666 G+A +LPHRYPF LVDKV+ FE GKR VGVK +T NEPQFTGHFPDRPIMPGVL VEAMAQLGG++ LQ PVSDG+G FFFAG+DG+K++KPVVPGD LVMEM+L ++EK+GIAKM GKAYVDGKVA+EVK+FTFAL KD Sbjct: 45 GVAKILPHRYPFLLVDKVVEFEAGKRIVGVKNVTANEPQFTGHFPDRPIMPGVLMVEAMAQLGGLVCLQQPVSDGKGEFFFAGIDGIKFRKPVVPGDTLVMEMELSKFREKYGIAKMKGKAYVDGKVAVEVKAFTFALVKD 185
BLAST of mRNA_C-australica_Contig_9.8.1 vs. uniprot
Match: A0A7S4D0T5_9EUGL (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4D0T5_9EUGL) HSP 1 Score: 235 bits (599), Expect = 1.110e-72 Identity = 124/196 (63.27%), Postives = 144/196 (73.47%), Query Frame = 1 Query: 85 CSFTEAFVAPALGLGITAGKAGLMMS---EEIDPETTAASYSAKIAHPDAVFGVDTGIADVLPHRYPFALVDKVIHFEPGKRAVGVKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGMIALQAPVSDGQGVFFFAGVDGVKWKKPVVPGDVLVMEMQLDTWKEKFGIAKMSGKAYVDGKVALEVKSFTFALAK 663 C +FV + A K +M S EE + E T A + + IA VLPHRYPF LVDKVI FE GKRAVGVK IT NEPQFTGHFPDRPIMPGVL +EAMAQLGG+IALQ PVSDGQGVFFFAG++GV+W++PVVPGD LVMEM+L ++KE+FGIAKM GKAYVDG+VA++V FTFALAK Sbjct: 125 CLMAASFVVGTVFGSARAPKPMVMASTAGEEAETEWTGAKAFSGLTKTVNTVSTIEDIAKVLPHRYPFLLVDKVIEFEAGKRAVGVKNITMNEPQFTGHFPDRPIMPGVLMIEAMAQLGGIIALQQPVSDGQGVFFFAGINGVRWRRPVVPGDTLVMEMELVSFKERFGIAKMKGKAYVDGQVAVDVAEFTFALAK 320
BLAST of mRNA_C-australica_Contig_9.8.1 vs. uniprot
Match: A0A7S3GZN9_9STRA (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZN9_9STRA) HSP 1 Score: 228 bits (581), Expect = 3.120e-72 Identity = 104/148 (70.27%), Postives = 128/148 (86.49%), Query Frame = 1 Query: 238 DTGIADVLPHRYPFALVDKVIHFEPGKRAVGVKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGMIALQAPVSDGQGVFFFAGVDGVKWKKPVVPGDVLVMEMQLDTWKEKFGIAKMSGKAYVDGKVALEVKSFTFALAKDK*AQP 681 + IA +LPHRYPF LVDKV+ FEPGKRAVGVK +T NEPQFTGHFPD PIMPGVL VEAMAQLGG++ LQAP+SDG+G FFFAG+DGVK+++PVVPGD LVMEM+L+ WK K+G+AKM GKAYV+G++A++V SFTFA+ +K +P Sbjct: 10 NVAIAKILPHRYPFLLVDKVVSFEPGKRAVGVKNVTANEPQFTGHFPDLPIMPGVLMVEAMAQLGGIVCLQAPISDGKGQFFFAGIDGVKFRRPVVPGDTLVMEMELEKWKPKYGVAKMKGKAYVNGQLAVQVDSFTFAMVPEKKEEP 157
BLAST of mRNA_C-australica_Contig_9.8.1 vs. uniprot
Match: A0A0G4H2S5_VITBC (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H2S5_VITBC) HSP 1 Score: 230 bits (586), Expect = 5.140e-72 Identity = 114/163 (69.94%), Postives = 133/163 (81.60%), Query Frame = 1 Query: 175 PETTAASYSAKIAHPDAVFGVDTGIADVLPHRYPFALVDKVIHFEPGKRAVGVKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGMIALQAPVSDGQGVFFFAGVDGVKWKKPVVPGDVLVMEMQLDTWKEKFGIAKMSGKAYVDGKVALEVKSFTFALAK 663 P +AAS S + V ++ I VLPHRYPF LVDKVI FEPGKRAVGVK I+ NEPQFTGHFP+R IMPGVLQ+EAMAQLGG++ LQ P+SDG+G FFFAGVDGV+WK+PVVPGDVLVMEM+L +W+ KFGIAKM+G YVDG+ A+EVK FTFALAK Sbjct: 64 PWRSAASVSELTSDVPVVMDIEA-IRKVLPHRYPFLLVDKVIEFEPGKRAVGVKTISANEPQFTGHFPERAIMPGVLQIEAMAQLGGLVCLQEPLSDGKGDFFFAGVDGVRWKRPVVPGDVLVMEMELLSWRAKFGIAKMTGAGYVDGQKAVEVKEFTFALAK 225
BLAST of mRNA_C-australica_Contig_9.8.1 vs. uniprot
Match: A0A7S1XUS2_9STRA (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUS2_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.920e-71 Identity = 116/183 (63.39%), Postives = 140/183 (76.50%), Query Frame = 1 Query: 142 KAGLMMSEEIDPETT--------AASYSAKIAHPDAVFGVDTGIADVLPHRYPFALVDKVIHFEPGKRAVGVKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGMIALQAPVSDGQGVFFFAGVDGVKWKKPVVPGDVLVMEMQLDTWKEKFGIAKMSGKAYVDGKVALEVKSFTFALAKD 666 + L MSE+ + T A + SA + VF ++ IA+VLPHRYPFALVDKVI FE GKRAVG+K +TNNEPQFTGHFP+RPIMPGVL +EAMAQLGG+IALQ PVS+G+G FFF GV+GVK++KPVVPGD LVMEM+L +WKE FGI KM G A+VDGK A+ V+ FTFAL K+ Sbjct: 29 RTALRMSEKTTEDVTETEIEWKGAQAVSALTKGVETVFPLEK-IAEVLPHRYPFALVDKVIEFEAGKRAVGIKQVTNNEPQFTGHFPERPIMPGVLMIEAMAQLGGVIALQEPVSNGEGTFFFGGVEGVKFRKPVVPGDTLVMEMELTSWKESFGICKMKGTAFVDGKPAVVVQEFTFALVKE 210
BLAST of mRNA_C-australica_Contig_9.8.1 vs. uniprot
Match: A0A7S2XX69_9STRA (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XX69_9STRA) HSP 1 Score: 226 bits (577), Expect = 9.400e-71 Identity = 115/174 (66.09%), Postives = 135/174 (77.59%), Query Frame = 1 Query: 157 MSEEIDPE--TTAASYSAKIAHPDAVFGVDTGIADVLPHRYPFALVDKVIHFEPGKRAVGVKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGMIALQAPVSD---GQGVFFFAGVDGVKWKKPVVPGDVLVMEMQLDTWKEKFGIAKMSGKAYVDGKVALEVKSFTFALAK 663 M+EE E T A ++S K V V+ IA +LPHRYPFALVDKVI EPGK+ VGVKCIT NEPQFTGHFPDRPIMPGVL VEAMAQLGG++ L P++D G G+FFF GVDGV+WK+PVVPGDVLVMEM+L W KFGIAK++GKAYV+GK+A++V FTFAL K Sbjct: 46 MTEEAAEENWTGAQAWSKKSEGIPVVKNVEE-IASILPHRYPFALVDKVIEMEPGKKIVGVKCITMNEPQFTGHFPDRPIMPGVLMVEAMAQLGGVLCLSQPLNDPNEGSGIFFFGGVDGVRWKRPVVPGDVLVMEMELKKWNAKFGIAKLTGKAYVEGKIAVDVSEFTFALQK 218
BLAST of mRNA_C-australica_Contig_9.8.1 vs. uniprot
Match: A0A6T1MGQ0_9DINO (3-hydroxyacyl-[acyl-carrier-protein] dehydratase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1MGQ0_9DINO) HSP 1 Score: 228 bits (580), Expect = 1.400e-70 Identity = 107/143 (74.83%), Postives = 125/143 (87.41%), Query Frame = 1 Query: 238 DTGIADVLPHRYPFALVDKVIHFEPGKRAVGVKCITNNEPQFTGHFPDRPIMPGVLQVEAMAQLGGMIALQAPVSDGQGVFFFAGVDGVKWKKPVVPGDVLVMEMQLDTWKEKFGIAKMSGKAYVDGKVALEVKSFTFALAKD 666 + +A VLPHRYPF LVDKV+ +EPGKRAVGVK +T NEPQFTGHFPDRPIMPGVL VEAMAQLGG++ LQ PVSDGQG FFFAG++G+K++KPVVPGD LVMEM+L ++EK+GIAKM G AYVDGKVA+EVK FTFAL K+ Sbjct: 120 NVAVAKVLPHRYPFLLVDKVLEYEPGKRAVGVKNVTANEPQFTGHFPDRPIMPGVLMVEAMAQLGGIVCLQPPVSDGQGEFFFAGINGIKFRKPVVPGDTLVMEMELVKFREKYGIAKMRGTAYVDGKVAVEVKEFTFALVKE 262 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_9.8.1 >prot_C-australica_Contig_9.8.1 ID=prot_C-australica_Contig_9.8.1|Name=mRNA_C-australica_Contig_9.8.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=212bp MMQLSAILLSLGVCTLCSFTEAFVAPALGLGITAGKAGLMMSEEIDPETTback to top mRNA from alignment at C-australica_Contig_9:28361..29856- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_9.8.1 ID=mRNA_C-australica_Contig_9.8.1|Name=mRNA_C-australica_Contig_9.8.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1496bp|location=Sequence derived from alignment at C-australica_Contig_9:28361..29856- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_9:28361..29856- >mRNA_C-australica_Contig_9.8.1 ID=mRNA_C-australica_Contig_9.8.1|Name=mRNA_C-australica_Contig_9.8.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=636bp|location=Sequence derived from alignment at C-australica_Contig_9:28361..29856- (Chrysoparadoxa australica CS_1217)back to top |