mRNA_C-australica_Contig_1051.3.3 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1051.3.3
Unique NamemRNA_C-australica_Contig_1051.3.3
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A835ZJ22_9STRA (Er lumen protein retaining receptor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ22_9STRA)

HSP 1 Score: 420 bits (1079), Expect = 2.230e-143
Identity = 207/295 (70.17%), Postives = 246/295 (83.39%), Query Frame = 2
Query:  224 MSSPYQTYASSPRPS-LEMVRKMHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQA--KGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQASIV 1099
            M SP      SPR + L++VRK ++ + +W GFFT AF +Y  FSDGDFSFLMT+AA  RTFGFALL VRMFIKKHAKGVSRKTL LYV VF  RLVSI RHEGYLPYD+SGDF+YH AE  S + A+L L FMHT FARSYQ+DYD+FGN+++P  +G LY+++PC V+AV  HP+LNNDF+SDT WTLSMY+E+CA+VPQL+MFQR A  KG+VEVLVSH VFALGFARVLDMVFWLYSYHELSDA+G+K+VG+ VL TQF+HIA+MGDFFYYYFIS+KTG  MQLP+ AS+V
Sbjct:    1 MHSPSAYDKLSPRSTNLDLVRKYNSTLFLWAGFFTFAFGIYYKFSDGDFSFLMTYAALARTFGFALLLVRMFIKKHAKGVSRKTLELYVFVFLPRLVSIFRHEGYLPYDKSGDFIYHAAEGLSLVGALLCLVFMHTSFARSYQRDYDTFGNIYIPARFGTLYMIVPCVVMAVLFHPTLNNDFISDTTWTLSMYMETCAIVPQLFMFQRSAVNKGVVEVLVSHSVFALGFARVLDMVFWLYSYHELSDAAGSKSVGMLVLATQFIHIAIMGDFFYYYFISIKTGQAMQLPVSASMV 295          
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A836CR66_9STRA (Er lumen protein retaining receptor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR66_9STRA)

HSP 1 Score: 416 bits (1070), Expect = 5.170e-142
Identity = 200/295 (67.80%), Postives = 247/295 (83.73%), Query Frame = 2
Query:  224 MSSPYQTYASSPRPS-LEMVRKMHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQA--KGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQASIV 1099
            M+SP      SPR + L+++++ ++ + VW  FFT  F +Y  FSDGDFSFLMT+AA TRTFGFALL VRMFIK+HAKGVSRKTL +YV+VF  RLVSILRHEGYLPYD+SGDF+YH AE+ S  LA   LF+MHT+F RSYQ+DYD+FG++ LP+  G LY+++PC V+AV +HP+LNNDF+SDT WTLSMY+E+CA++PQLYMFQR A  KG+VEVLVSH VFALGFARVLDM+FWLYSYHELSDA+G+K+VG+ VL TQF+HIA+MGDFFYYY IS+KTG  MQLP+ AS+V
Sbjct:    1 MASPSAYDKLSPRSTNLDLIKQYNSGLAVWVAFFTFVFLIYYKFSDGDFSFLMTYAALTRTFGFALLLVRMFIKQHAKGVSRKTLEMYVLVFFPRLVSILRHEGYLPYDKSGDFIYHAAEMLSMALAAACLFYMHTRFERSYQRDYDTFGSVGLPSHLGTLYMIVPCVVLAVLLHPTLNNDFISDTTWTLSMYMETCAIIPQLYMFQRSAANKGVVEVLVSHSVFALGFARVLDMIFWLYSYHELSDAAGSKSVGMLVLATQFIHIAIMGDFFYYYLISIKTGKAMQLPISASMV 295          
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: D7FX19_ECTSI (Er lumen protein retaining receptor 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX19_ECTSI)

HSP 1 Score: 377 bits (969), Expect = 9.560e-127
Identity = 183/272 (67.28%), Postives = 223/272 (81.99%), Query Frame = 2
Query:  278 VRKMHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQAS 1093
            VRK H  I +WFGFFTA+F ++ +FSDGDFSFLMTFA+FTR FGFA+L   M  KKHA+GVS K+L LY VVF SRLVS+L+HEGYLPYDRSGDFVYH AEI S  LAV  +  + TKF  +YQ+D DSFG LH+P EWG LY+ +PC ++A+ +HP+LN +F+SDTAWT SMYLES A+VPQL+MFQ+QAKGIVEVLV+H  FALG ARVLDMVFW++SY EL+ A G+ +VG+FVL +QFVH+ +MGDFFYYY IS+KTG+MMQLP Q S
Sbjct:   19 VRKQHMNIALWFGFFTASFVVFYLFSDGDFSFLMTFASFTRGFGFAVLLGLMLAKKHARGVSMKSLQLYAVVFASRLVSVLQHEGYLPYDRSGDFVYHGAEIASLALAVGCVVLISTKFKSTYQQDVDSFGALHVPTEWGTLYIFVPCLLLAIVMHPNLNKNFLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTHSTFALGLARVLDMVFWMFSYKELTHA-GSNSVGMFVLFSQFVHVVIMGDFFYYYAISVKTGNMMQLPSQLS 289          
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A7S2GHT0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHT0_9STRA)

HSP 1 Score: 307 bits (787), Expect = 2.760e-99
Identity = 145/268 (54.10%), Postives = 198/268 (73.88%), Query Frame = 2
Query:  308 WFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKG----IVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQASIV 1099
            W  FF  +  +Y M SDGDFSFL+T+A+  R F F +LN++MF    A  VS KTL  Y+VVF  RLVSI+RHEGYLPYD SGD+ YH+ E TS + A +A++ +  K+  +Y    D+FGNL +P+  G+LY+++PC ++AV  HP+LN DF+SD +WT SMYLES A++PQLYMFQ+QA G    ++EVLVSH VFALGFARV++  FW+ S+HEL   +G++ VG  VL +QF+H+A+MGDFFY+YF+SL++G  MQLP Q+ +V
Sbjct:   21 WIAFFFVSLLIYKMLSDGDFSFLLTYASVCRCFAFIILNIKMFTSNSASSVSLKTLEAYIVVFFWRLVSIMRHEGYLPYDSSGDWFYHVVEFTSLVSACVAVYQLFYKYRGTYDDSKDAFGNLGIPSFLGVLYIVLPCLILAVIFHPNLNKDFISDASWTFSMYLESLAILPQLYMFQKQASGTGSGVIEVLVSHSVFALGFARVVESAFWMSSFHELHSGAGSQFVGWVVLLSQFIHVALMGDFFYFYFLSLQSGTAMQLPTQSGLV 288          
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A7S2SS64_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS64_9STRA)

HSP 1 Score: 300 bits (769), Expect = 2.200e-96
Identity = 145/278 (52.16%), Postives = 198/278 (71.22%), Query Frame = 2
Query:  269 LEMVRKMHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQ-LPMQASIV 1099
            +++ R  ++ +  W  FF+ +F +Y   SDGDFSF++T++A  R F F LLN RM     A  VS KTL  YVVVF  RL S+LRHEGYLPYDRSGD+ YH+ E TS  L   A+F ++ +F  +Y +  D+FG+LH+P ++G++Y+++P  ++A+F+ P+LN DF SD AWT SMYLES A++PQLYMF +QA   VEVLVSHCVFALGFARV++M FWL+S+HEL+  +  + VG  VL +QF H+A MGDFFYYYF S++ G  M  LP  + +V
Sbjct:   24 MDVKRPSNSMVLAWVAFFSFSFIVYYALSDGDFSFILTYSALWRCFAFFLLNFRMLTSNSASSVSLKTLEAYVVVFVFRLASLLRHEGYLPYDRSGDWFYHLVETTSLALVCGAIFLLYFRFRATYDEAKDAFGSLHIPPQYGVVYIIVPAMILAIFLRPNLNKDFFSDAAWTFSMYLESVAILPQLYMFTKQANTPVEVLVSHCVFALGFARVMEMAFWLWSFHELTGHATGRLVGYVVLLSQFFHVAFMGDFFYYYFQSIRWGTPMNVLPTHSGMV 301          
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A6V2QBA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QBA8_HETAK)

HSP 1 Score: 298 bits (762), Expect = 1.520e-95
Identity = 142/269 (52.79%), Postives = 196/269 (72.86%), Query Frame = 2
Query:  287 MHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQAS 1093
            M+  +  W  F T +   + +FSDGDFSF+MT+A+ TR F FA+L  +M   K ++GVS KTL LY +++  RL +I RHEGYLP+DRSGD+ YH+ E  + +L  L+ F +   FA  Y+K +D FGNLH+P E+G +YL++PC ++A+  HPSLNN++ SD  WT SMYLE+ A++PQLYMFQ+Q   +VEVL+SH VFALGFARVLD+VFWL +Y EL+        G+ +L TQF+++A+MGDFFYYYF+S+K+G  MQLPM A+
Sbjct:   14 MNFTVLAWGSFLTISLLCFYLFSDGDFSFVMTYASMTRFFAFAVLAFKMIWTKSSQGVSLKTLELYFLMYLFRLAAIARHEGYLPFDRSGDWFYHMVEFLALVLVGLSGFLIMGPFAARYEKTFDCFGNLHVPPEYGAVYLIVPCFLLALVFHPSLNNEWFSDCCWTFSMYLETVAIMPQLYMFQKQVSRVVEVLISHSVFALGFARVLDLVFWLSTYSELAGKGSTNFSGMLILFTQFINVALMGDFFYYYFLSIKSGTGMQLPMTAA 282          
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A7S2UQ71_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ71_9STRA)

HSP 1 Score: 296 bits (758), Expect = 6.760e-94
Identity = 138/273 (50.55%), Postives = 197/273 (72.16%), Query Frame = 2
Query:  278 VRKMHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQASI 1096
            ++ ++  I +W GFFTA+  +Y + S GDFSFLMT+ A +R FGF +LNV+ F  K A GVS K+L LY +VF  RL SI+RHEGYLPYD+SGD+VYHI E+ + +    AL+     F ++YQ D+D FG L++P  +G +Y+  P  V+A+F+HPSLNNDF+SD AWT +MYLES AL+PQLYMFQ+Q  G+VE+L +H V ALGF R+L+ +FW+YSYHEL+ ++G+K  G   L +QF+ + +M DFF+YY++++K    + LP  + +
Sbjct:   85 LQALNQNIIMWAGFFTASLFVYFLLSGGDFSFLMTYGAMSRMFGFGILNVKTFKSKRATGVSIKSLQLYCIVFVCRLTSIIRHEGYLPYDKSGDWVYHIIELMALVFTAAALWACMGPFKQTYQSDFDKFGELNVPPGYGAVYIAGPVLVIALFIHPSLNNDFLSDVAWTYAMYLESVALIPQLYMFQKQTSGVVELLTAHFVAALGFGRLLEFLFWIYSYHELASSAGSKLPGYLALFSQFMQLVLMLDFFWYYYLAVKNATPLVLPSHSGM 357          
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: B8C3M7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3M7_THAPS)

HSP 1 Score: 293 bits (750), Expect = 7.750e-94
Identity = 139/269 (51.67%), Postives = 194/269 (72.12%), Query Frame = 2
Query:  287 MHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQAS 1093
            ++  + +W GFFTA+  +Y M S GDFSFLMT+ A +R FGF +LNV+ F+ K A GVS KTL LY +VF  RL SI+RHEGYLPYD+SGD++YH+ EI + +    AL+     F ++YQ D D FG +++P   G +YL +P  ++AVFVHP+LN+DFVSD AWT +MYLES ALVPQL+MFQ+Q  G+VE+L +H V ALGF RV++ +FW+YSYHEL+ ++G+K  G   L +QF+ + +M DFF+YY++++K    + LP   S
Sbjct:    6 LNKNVIMWAGFFTASLFVYFMMSGGDFSFLMTYGAMSRMFGFGILNVKTFMSKRATGVSVKTLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEILALVFTASALWGCMVPFKQTYQADQDKFGEMNVPPGAGAVYLAVPVMLLAVFVHPNLNSDFVSDVAWTYAMYLESVALVPQLFMFQKQQSGVVELLTAHFVAALGFGRVMEFMFWVYSYHELATSAGSKLPGYLALFSQFMQLVLMLDFFWYYYLAVKNATPLVLPSHGS 274          
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A7S2H0H3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H0H3_9STRA)

HSP 1 Score: 293 bits (751), Expect = 9.220e-93
Identity = 139/272 (51.10%), Postives = 193/272 (70.96%), Query Frame = 2
Query:  278 VRKMHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQAS 1093
            ++ ++  + +W GFF+ +  +Y + S GDFSFLMT+ A  R FGF +LNV+ F  K A GVS KTL LY +VF  RL SI+RHEGYLPYD+SGD++YH+ EI + +    AL+     F  +YQ D D FG +++P+  G +YL +P  +VA+F+HP+LN+DF+SD AWT +MYLES ALVPQLYMFQ+QA G+VE+L +H V ALGF RVL+  FW+YSYHEL+ ++G+K  G   + +QFV + +M DFFYYY++++K    M LP   S
Sbjct:   90 LQALNQNVIMWAGFFSVSLFVYFVLSGGDFSFLMTYGAMARMFGFGILNVKTFTSKRATGVSIKTLQLYSMVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEIMALIFTSSALYGCMFPFKSTYQADADKFGEINVPSGLGAVYLAVPVLLVALFIHPNLNSDFLSDVAWTYAMYLESVALVPQLYMFQKQATGVVELLTAHFVAALGFGRVLEFAFWIYSYHELASSNGSKLPGYLAILSQFVQLVLMLDFFYYYYVAVKNATPMVLPSHTS 361          
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A7S0AL10_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AL10_9STRA)

HSP 1 Score: 293 bits (750), Expect = 1.670e-92
Identity = 135/269 (50.19%), Postives = 194/269 (72.12%), Query Frame = 2
Query:  287 MHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQAS 1093
            ++  + +W GFFTA+  +Y + S GDFSFLMT+ A +R FGF +LN++ F+ K A GVS KTL LY +VF  RL SI+RHEGYLPYD+SGD++YH+ EI + +    A +     F ++YQ D D FG +++P+ +G +YL +P  ++A+ VHP+LN+DF+SD AWT +MYLES AL+PQLYMFQ+Q  G+VE+L +H V ALGF R+L+  FW+YSYHEL+ A+G+K  G   L +QF+ + +M DFF+YY++++K    + LP Q S
Sbjct:  101 LNKNVMIWAGFFTASLFVYFVLSGGDFSFLMTYGAMSRMFGFGILNIKTFMSKRATGVSIKTLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEILALIFTASACWGCMGPFKQTYQPDQDRFGEMNVPSGYGAVYLAVPIMILAILVHPNLNSDFLSDVAWTYAMYLESVALIPQLYMFQKQTSGVVELLTAHFVAALGFGRLLEFAFWVYSYHELATAAGSKLPGYLALFSQFMQLVLMLDFFWYYYMAVKNATPLVLPTQGS 369          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZJ22_9STRA2.230e-14370.17Er lumen protein retaining receptor 1 n=1 Tax=Trib... [more]
A0A836CR66_9STRA5.170e-14267.80Er lumen protein retaining receptor 1 n=1 Tax=Trib... [more]
D7FX19_ECTSI9.560e-12767.28Er lumen protein retaining receptor 1 n=2 Tax=Ecto... [more]
A0A7S2GHT0_9STRA2.760e-9954.10Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SS64_9STRA2.200e-9652.16Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V2QBA8_HETAK1.520e-9552.79Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2UQ71_9STRA6.760e-9450.55Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8C3M7_THAPS7.750e-9451.67Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2H0H3_9STRA9.220e-9351.10Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S0AL10_9STRA1.670e-9250.19Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1051contigC-australica_Contig_1051:9082..12337 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FX19
PFAMsER_lumen_recept
Model size1325
Max annot lvl2759|Eukaryota
KEGG koko:K10949
KEGG Pathwayko05110,map05110
Hectar predicted targeting categorysignal anchor
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0012505,GO:0016020,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0098827
Exons11
Evalue3.49e-130
EggNOG OGsCOG5196@1|root,KOG3106@2759|Eukaryota
Ec32 ortholog descriptioner lumen protein retaining receptor 1
Ec32 orthologEc-10_003970.1
DescriptionER retention sequence binding
Cds size879
COG categoryU
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1051.3.3prot_C-australica_Contig_1051.3.3Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1051 9305..12114 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586789.7136824-UTR-C-australica_Contig_1051:9081..93041682586789.7136824-UTR-C-australica_Contig_1051:9081..9304Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1051 9082..9304 -
1682586789.833641-UTR-C-australica_Contig_1051:12114..123371682586789.833641-UTR-C-australica_Contig_1051:12114..12337Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1051 12115..12337 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586789.7266588-CDS-C-australica_Contig_1051:9304..93461682586789.7266588-CDS-C-australica_Contig_1051:9304..9346Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1051 9305..9346 -
1682586789.7354023-CDS-C-australica_Contig_1051:9506..96221682586789.7354023-CDS-C-australica_Contig_1051:9506..9622Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1051 9507..9622 -
1682586789.744654-CDS-C-australica_Contig_1051:9745..98241682586789.744654-CDS-C-australica_Contig_1051:9745..9824Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1051 9746..9824 -
1682586789.7533715-CDS-C-australica_Contig_1051:10036..101511682586789.7533715-CDS-C-australica_Contig_1051:10036..10151Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1051 10037..10151 -
1682586789.761207-CDS-C-australica_Contig_1051:10255..103531682586789.761207-CDS-C-australica_Contig_1051:10255..10353Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1051 10256..10353 -
1682586789.7691114-CDS-C-australica_Contig_1051:10424..105271682586789.7691114-CDS-C-australica_Contig_1051:10424..10527Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1051 10425..10527 -
1682586789.7772958-CDS-C-australica_Contig_1051:10728..108201682586789.7772958-CDS-C-australica_Contig_1051:10728..10820Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1051 10729..10820 -
1682586789.7855334-CDS-C-australica_Contig_1051:11013..111231682586789.7855334-CDS-C-australica_Contig_1051:11013..11123Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1051 11014..11123 -
1682586789.8011007-CDS-C-australica_Contig_1051:11394..114641682586789.8011007-CDS-C-australica_Contig_1051:11394..11464Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1051 11395..11464 -
1682586789.813883-CDS-C-australica_Contig_1051:11976..120081682586789.813883-CDS-C-australica_Contig_1051:11976..12008Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1051 11977..12008 -
1682586789.823768-CDS-C-australica_Contig_1051:12092..121141682586789.823768-CDS-C-australica_Contig_1051:12092..12114Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1051 12093..12114 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1051.3.3

>prot_C-australica_Contig_1051.3.3 ID=prot_C-australica_Contig_1051.3.3|Name=mRNA_C-australica_Contig_1051.3.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=293bp
MSSPYQTYASSPRPSLEMVRKMHNQIGVWFGFFTAAFALYTMFSDGDFSF
LMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILR
HEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGN
LHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVP
QLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKT
VGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQASIV*
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mRNA from alignment at C-australica_Contig_1051:9082..12337-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1051.3.3 ID=mRNA_C-australica_Contig_1051.3.3|Name=mRNA_C-australica_Contig_1051.3.3|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3256bp|location=Sequence derived from alignment at C-australica_Contig_1051:9082..12337- (Chrysoparadoxa australica CS_1217)
CCTTCTGCAAGCTTGTGAGCTGCTGCCAGGCCTGGCAGCAAAATTGGTGT TGCGGGATGGGTGTTCTATCTGAAGCTTGTAGCTTAAGTAATTGTAAGGA AGGGCAAAGGGCAAGTTGTCAGGCCGACATTTAACATGCTCAAACCATAG AGACTAGAAAAACAAAAACAAACCCTATCCAGCGCTGATCTGTGTCTTCA AGCGGTCTTAGGCATTGGGCATCATGAGCAGCCCTTATCAGACCTGTAAG TTTGGTGAACCTAACATCACAAAGAGCAAAGAACAGGAGCTAAACCAGAG CTATCCCTTACCCTCTCTTGGCCTTGCAGATGCATCCTCTCCGCGGCCTT CGTTGGAGATGGTAAGCTTTGGAGAAGGACCTTTTTCCCTCCCCCTTCCC GTTGCCTTCTCGTGGCAACTGTAGCCTTTCCCTCTTGAGTTAGACGACTT GGGTGGTAATGGTGGCTAGGCCTGTTGCAGTCTGTTTCTGCTTTTGTTCC ACTGGCAGGGGCTAGTGAGCTAGCGCATAGCCCCCGTATCCCGACAAGTA ATCGCACAATGCAGCCTCGTGCTGTGCGGCCTGTAGAGCTGAACGCTTGG TCGGGCATGTTGCCTTATCACTTAGGCATTTGCCTTCTACCACCGCCGGC ACGCGGGCAGTTCAGAGTACCAAATGCCCACTCAACATGGTACCTTGCGT GACGCTAGATGAATCAAAACCACCCAGCTGCCTACTCCTTGAGCCAGTGC ACACTAGCTGCTTTCTCTCACCAGCCAGGTCTCTCAGTCTTTGACCATTG GCGAGCATCAGCTGGCCTGATGTTCTGCTTTTTCCCGGTGTGCGTTTCGT GCTCACCTCACCCTGTTCAATAGGTCCGGAAAATGCACAACCAGATTGGC GTGTGGTTTGGATTTTTCACGGCAGCTTTTGCCCTCTACACCAGTAAGCT ATTGAATCCACCCGGGCTATGAAGGAGTTTCTCTGTACTAGCTTTCCCTA GCCCTGCTACGTCTCTCCATTAATCATGCTTACCTCGTCTTGATCATCCT GCCTGCAACTATCTTGCTCATATGTAAACTTGCCCACTTGGTCAAACCAC ATAATCCTCTCCTGTCAATTACTTTCCATGAGTAAGGGTATTAAAAGGGC AAGAGATGGAGAGGTGATGCGGCCTGACCACTTTTGATTGACCACCTGCT TATCCCTCCTTCAGTGTTCAGCGATGGAGATTTCTCCTTCCTTATGACCT TTGCAGCATTCACGAGGACGTTTGGCTTTGCGCTGTTGAATGTGCGCATG TTCATAAAGAAACATGCCAAGGGGGTGCGTTCCTCAAGCTTCACCCTGAA TCTGAATACACCGCTAGCTAATTAATGGCCTTGGCCCAATGGCCCTTGCA GTTGCTTCTTGGCTTATCTCGCTGCTGCATGTATCAATTCCTCTGATGGT TACATTCTACCATCTCTCCGCTCACCTTCCTCACCTTCTGCTGCTGCCTC TTCCTGTGCCCCGTAAGGTGTCCCGCAAGACTCTCTACCTCTATGTCGTA GTTTTTGGCAGCCGCCTTGTGTCTATCCTTAGACATGAAGGCTACCTGCC TTATGACAGGTAATGAACCATTCATGATAAAGACCTGAAGAGCCTTGTGA GAATACTCCTGCTGTCTTGTGGGCTGGACTCCGTCATTCGATATCGCTCT CTGACCCTTGCACAAACTGCCCTCATTTTCCCCTGCCCACTTCCTACCAT ATCACCCTACCTTCAACACTCCTTACTTACCTTACTTACTCCTGCTCATC TTTTAAACAGGAGTGGTGACTTTGTCTACCACATTGCCGAGATCACATCG GGTCTACTGGCTGTCTTAGCTCTTTTCTTCATGCACACAAAATTTGCGCG CTCCTACCAGAAGGTGCTGCATCAAGGGAGTTAACCCTTCGCCCTTCTCC CCTGACCCTGTCCTTGACCCTGATACCCCCTCAGGATTACGACTCGTTTG GTAACCTCCACTTACCCAATGAGTGGGGTCTCCTCTATTTGCTCATTCCA TGCACAGTGGTTGCCGTCTTTGTACACCCAAGGTAATCCAAGCCCCATCC GTTCTCAACGGTTGATAGATAATAGATCCCGGGTCCATAACAGCTGCTGC TTCCCTCTGCTCTCTGCTCTCTGCTCTTTTTCTCAGCCTCAACAACGACT TTGTGAGTGATACCGCGTGGACTCTGTCTATGTATCTTGAATCATGTGCT CTGGTGCCACAACTGTACATGTTTCAGCGGCAGGCCAAGGGTATCGTTGA GGTAAAGTATGGGACATTGTAGCCCCCAAGGCTGCAACCTTTACTATATG GAAGACTTACTTTAAATAGTGTTGGCATGCATGGTTGAGATGTTCAGGAC TAATGGGGGTTTGTAAGGGTGACCATTGGCACCTCTGATGTGGGTCTTAC GGCGACTTGCATGCTCTTCCCTATATCTCATCACCTATCTCTGTTTTTTT TTCTTTCTACTAGGTGCTTGTATCTCACTGTGTCTTCGCTCTTGGGTTTG CCCGTGTGCTGGACATGGTCTTCTGGCTCTACTCATACCATGGTAAAGTC AGTCACAAAGCATGTCAGCTAAATATTTGCTGTCTTTCAAGCTCAGCACT CTTGCTTTAATTGCCACGTGTCCCCTGATCTGCCTTGACCCCCCCTTCCT ATCCCTAAATATCAGAGCTCTCTGATGCATCTGGCAACAAGACCGTCGGC GTGTTTGTTCTTGGCACACAATTTGTTCATATTGCTGTTATGGGTGACTT CTTCTACTACTACTTCATCAGCTTAAAGACGGTAAGGCATGCTACTAAGG CAACAAGCATGAGCTTGCGCTTGCTTCCTACCCTCTCTCAACCTACCCCA ACAACTCCATTTCCCCATCAATCCCAGCTGAAACGCAACCCTAACCCTGC AATAACAATATCCTTGTGGACACTCTTCTTTTACGGCACAGGGTGACATG ATGCAGTTGCCTATGCAAGCCAGTATTGTCTAGCTTTTGCAAGGTTTGCT GCGGTGCCATAGTGTGGGGAACTATTATGAGAGCTATGGTAAGGGGGAGA AGGCTTAGCGCATGTTAACGCGGCTGATATCCTGCCCAGCGAGGTTCAAC TTTCGCTTGGCCCCGTTTAACTTGGAAAAGAAAGACGCTACAGTAACAGC ACAGGCGCATAATGGAGGAGAAAAAGATCTAGGAGTCGGAGTCGTAGCCT TTCAAG
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Coding sequence (CDS) from alignment at C-australica_Contig_1051:9082..12337-

>mRNA_C-australica_Contig_1051.3.3 ID=mRNA_C-australica_Contig_1051.3.3|Name=mRNA_C-australica_Contig_1051.3.3|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=879bp|location=Sequence derived from alignment at C-australica_Contig_1051:9082..12337- (Chrysoparadoxa australica CS_1217)
ATGAGCAGCCCTTATCAGACCTATGCATCCTCTCCGCGGCCTTCGTTGGA
GATGGTCCGGAAAATGCACAACCAGATTGGCGTGTGGTTTGGATTTTTCA
CGGCAGCTTTTGCCCTCTACACCATGTTCAGCGATGGAGATTTCTCCTTC
CTTATGACCTTTGCAGCATTCACGAGGACGTTTGGCTTTGCGCTGTTGAA
TGTGCGCATGTTCATAAAGAAACATGCCAAGGGGGTGTCCCGCAAGACTC
TCTACCTCTATGTCGTAGTTTTTGGCAGCCGCCTTGTGTCTATCCTTAGA
CATGAAGGCTACCTGCCTTATGACAGGAGTGGTGACTTTGTCTACCACAT
TGCCGAGATCACATCGGGTCTACTGGCTGTCTTAGCTCTTTTCTTCATGC
ACACAAAATTTGCGCGCTCCTACCAGAAGGATTACGACTCGTTTGGTAAC
CTCCACTTACCCAATGAGTGGGGTCTCCTCTATTTGCTCATTCCATGCAC
AGTGGTTGCCGTCTTTGTACACCCAAGCCTCAACAACGACTTTGTGAGTG
ATACCGCGTGGACTCTGTCTATGTATCTTGAATCATGTGCTCTGGTGCCA
CAACTGTACATGTTTCAGCGGCAGGCCAAGGGTATCGTTGAGGTGCTTGT
ATCTCACTGTGTCTTCGCTCTTGGGTTTGCCCGTGTGCTGGACATGGTCT
TCTGGCTCTACTCATACCATGAGCTCTCTGATGCATCTGGCAACAAGACC
GTCGGCGTGTTTGTTCTTGGCACACAATTTGTTCATATTGCTGTTATGGG
TGACTTCTTCTACTACTACTTCATCAGCTTAAAGACGGGTGACATGATGC
AGTTGCCTATGCAAGCCAGTATTGTCTAG
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