mRNA_C-australica_Contig_1051.3.3 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A835ZJ22_9STRA (Er lumen protein retaining receptor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ22_9STRA) HSP 1 Score: 420 bits (1079), Expect = 2.230e-143 Identity = 207/295 (70.17%), Postives = 246/295 (83.39%), Query Frame = 2
Query: 224 MSSPYQTYASSPRPS-LEMVRKMHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQA--KGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQASIV 1099
M SP SPR + L++VRK ++ + +W GFFT AF +Y FSDGDFSFLMT+AA RTFGFALL VRMFIKKHAKGVSRKTL LYV VF RLVSI RHEGYLPYD+SGDF+YH AE S + A+L L FMHT FARSYQ+DYD+FGN+++P +G LY+++PC V+AV HP+LNNDF+SDT WTLSMY+E+CA+VPQL+MFQR A KG+VEVLVSH VFALGFARVLDMVFWLYSYHELSDA+G+K+VG+ VL TQF+HIA+MGDFFYYYFIS+KTG MQLP+ AS+V
Sbjct: 1 MHSPSAYDKLSPRSTNLDLVRKYNSTLFLWAGFFTFAFGIYYKFSDGDFSFLMTYAALARTFGFALLLVRMFIKKHAKGVSRKTLELYVFVFLPRLVSIFRHEGYLPYDKSGDFIYHAAEGLSLVGALLCLVFMHTSFARSYQRDYDTFGNIYIPARFGTLYMIVPCVVMAVLFHPTLNNDFISDTTWTLSMYMETCAIVPQLFMFQRSAVNKGVVEVLVSHSVFALGFARVLDMVFWLYSYHELSDAAGSKSVGMLVLATQFIHIAIMGDFFYYYFISIKTGQAMQLPVSASMV 295
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A836CR66_9STRA (Er lumen protein retaining receptor 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR66_9STRA) HSP 1 Score: 416 bits (1070), Expect = 5.170e-142 Identity = 200/295 (67.80%), Postives = 247/295 (83.73%), Query Frame = 2
Query: 224 MSSPYQTYASSPRPS-LEMVRKMHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQA--KGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQASIV 1099
M+SP SPR + L+++++ ++ + VW FFT F +Y FSDGDFSFLMT+AA TRTFGFALL VRMFIK+HAKGVSRKTL +YV+VF RLVSILRHEGYLPYD+SGDF+YH AE+ S LA LF+MHT+F RSYQ+DYD+FG++ LP+ G LY+++PC V+AV +HP+LNNDF+SDT WTLSMY+E+CA++PQLYMFQR A KG+VEVLVSH VFALGFARVLDM+FWLYSYHELSDA+G+K+VG+ VL TQF+HIA+MGDFFYYY IS+KTG MQLP+ AS+V
Sbjct: 1 MASPSAYDKLSPRSTNLDLIKQYNSGLAVWVAFFTFVFLIYYKFSDGDFSFLMTYAALTRTFGFALLLVRMFIKQHAKGVSRKTLEMYVLVFFPRLVSILRHEGYLPYDKSGDFIYHAAEMLSMALAAACLFYMHTRFERSYQRDYDTFGSVGLPSHLGTLYMIVPCVVLAVLLHPTLNNDFISDTTWTLSMYMETCAIIPQLYMFQRSAANKGVVEVLVSHSVFALGFARVLDMIFWLYSYHELSDAAGSKSVGMLVLATQFIHIAIMGDFFYYYLISIKTGKAMQLPISASMV 295
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: D7FX19_ECTSI (Er lumen protein retaining receptor 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX19_ECTSI) HSP 1 Score: 377 bits (969), Expect = 9.560e-127 Identity = 183/272 (67.28%), Postives = 223/272 (81.99%), Query Frame = 2
Query: 278 VRKMHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQAS 1093
VRK H I +WFGFFTA+F ++ +FSDGDFSFLMTFA+FTR FGFA+L M KKHA+GVS K+L LY VVF SRLVS+L+HEGYLPYDRSGDFVYH AEI S LAV + + TKF +YQ+D DSFG LH+P EWG LY+ +PC ++A+ +HP+LN +F+SDTAWT SMYLES A+VPQL+MFQ+QAKGIVEVLV+H FALG ARVLDMVFW++SY EL+ A G+ +VG+FVL +QFVH+ +MGDFFYYY IS+KTG+MMQLP Q S
Sbjct: 19 VRKQHMNIALWFGFFTASFVVFYLFSDGDFSFLMTFASFTRGFGFAVLLGLMLAKKHARGVSMKSLQLYAVVFASRLVSVLQHEGYLPYDRSGDFVYHGAEIASLALAVGCVVLISTKFKSTYQQDVDSFGALHVPTEWGTLYIFVPCLLLAIVMHPNLNKNFLSDTAWTFSMYLESMAIVPQLFMFQKQAKGIVEVLVTHSTFALGLARVLDMVFWMFSYKELTHA-GSNSVGMFVLFSQFVHVVIMGDFFYYYAISVKTGNMMQLPSQLS 289
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A7S2GHT0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GHT0_9STRA) HSP 1 Score: 307 bits (787), Expect = 2.760e-99 Identity = 145/268 (54.10%), Postives = 198/268 (73.88%), Query Frame = 2
Query: 308 WFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKG----IVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQASIV 1099
W FF + +Y M SDGDFSFL+T+A+ R F F +LN++MF A VS KTL Y+VVF RLVSI+RHEGYLPYD SGD+ YH+ E TS + A +A++ + K+ +Y D+FGNL +P+ G+LY+++PC ++AV HP+LN DF+SD +WT SMYLES A++PQLYMFQ+QA G ++EVLVSH VFALGFARV++ FW+ S+HEL +G++ VG VL +QF+H+A+MGDFFY+YF+SL++G MQLP Q+ +V
Sbjct: 21 WIAFFFVSLLIYKMLSDGDFSFLLTYASVCRCFAFIILNIKMFTSNSASSVSLKTLEAYIVVFFWRLVSIMRHEGYLPYDSSGDWFYHVVEFTSLVSACVAVYQLFYKYRGTYDDSKDAFGNLGIPSFLGVLYIVLPCLILAVIFHPNLNKDFISDASWTFSMYLESLAILPQLYMFQKQASGTGSGVIEVLVSHSVFALGFARVVESAFWMSSFHELHSGAGSQFVGWVVLLSQFIHVALMGDFFYFYFLSLQSGTAMQLPTQSGLV 288
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A7S2SS64_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS64_9STRA) HSP 1 Score: 300 bits (769), Expect = 2.200e-96 Identity = 145/278 (52.16%), Postives = 198/278 (71.22%), Query Frame = 2
Query: 269 LEMVRKMHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQ-LPMQASIV 1099
+++ R ++ + W FF+ +F +Y SDGDFSF++T++A R F F LLN RM A VS KTL YVVVF RL S+LRHEGYLPYDRSGD+ YH+ E TS L A+F ++ +F +Y + D+FG+LH+P ++G++Y+++P ++A+F+ P+LN DF SD AWT SMYLES A++PQLYMF +QA VEVLVSHCVFALGFARV++M FWL+S+HEL+ + + VG VL +QF H+A MGDFFYYYF S++ G M LP + +V
Sbjct: 24 MDVKRPSNSMVLAWVAFFSFSFIVYYALSDGDFSFILTYSALWRCFAFFLLNFRMLTSNSASSVSLKTLEAYVVVFVFRLASLLRHEGYLPYDRSGDWFYHLVETTSLALVCGAIFLLYFRFRATYDEAKDAFGSLHIPPQYGVVYIIVPAMILAIFLRPNLNKDFFSDAAWTFSMYLESVAILPQLYMFTKQANTPVEVLVSHCVFALGFARVMEMAFWLWSFHELTGHATGRLVGYVVLLSQFFHVAFMGDFFYYYFQSIRWGTPMNVLPTHSGMV 301
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A6V2QBA8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QBA8_HETAK) HSP 1 Score: 298 bits (762), Expect = 1.520e-95 Identity = 142/269 (52.79%), Postives = 196/269 (72.86%), Query Frame = 2
Query: 287 MHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQAS 1093
M+ + W F T + + +FSDGDFSF+MT+A+ TR F FA+L +M K ++GVS KTL LY +++ RL +I RHEGYLP+DRSGD+ YH+ E + +L L+ F + FA Y+K +D FGNLH+P E+G +YL++PC ++A+ HPSLNN++ SD WT SMYLE+ A++PQLYMFQ+Q +VEVL+SH VFALGFARVLD+VFWL +Y EL+ G+ +L TQF+++A+MGDFFYYYF+S+K+G MQLPM A+
Sbjct: 14 MNFTVLAWGSFLTISLLCFYLFSDGDFSFVMTYASMTRFFAFAVLAFKMIWTKSSQGVSLKTLELYFLMYLFRLAAIARHEGYLPFDRSGDWFYHMVEFLALVLVGLSGFLIMGPFAARYEKTFDCFGNLHVPPEYGAVYLIVPCFLLALVFHPSLNNEWFSDCCWTFSMYLETVAIMPQLYMFQKQVSRVVEVLISHSVFALGFARVLDLVFWLSTYSELAGKGSTNFSGMLILFTQFINVALMGDFFYYYFLSIKSGTGMQLPMTAA 282
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A7S2UQ71_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ71_9STRA) HSP 1 Score: 296 bits (758), Expect = 6.760e-94 Identity = 138/273 (50.55%), Postives = 197/273 (72.16%), Query Frame = 2
Query: 278 VRKMHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQASI 1096
++ ++ I +W GFFTA+ +Y + S GDFSFLMT+ A +R FGF +LNV+ F K A GVS K+L LY +VF RL SI+RHEGYLPYD+SGD+VYHI E+ + + AL+ F ++YQ D+D FG L++P +G +Y+ P V+A+F+HPSLNNDF+SD AWT +MYLES AL+PQLYMFQ+Q G+VE+L +H V ALGF R+L+ +FW+YSYHEL+ ++G+K G L +QF+ + +M DFF+YY++++K + LP + +
Sbjct: 85 LQALNQNIIMWAGFFTASLFVYFLLSGGDFSFLMTYGAMSRMFGFGILNVKTFKSKRATGVSIKSLQLYCIVFVCRLTSIIRHEGYLPYDKSGDWVYHIIELMALVFTAAALWACMGPFKQTYQSDFDKFGELNVPPGYGAVYIAGPVLVIALFIHPSLNNDFLSDVAWTYAMYLESVALIPQLYMFQKQTSGVVELLTAHFVAALGFGRLLEFLFWIYSYHELASSAGSKLPGYLALFSQFMQLVLMLDFFWYYYLAVKNATPLVLPSHSGM 357
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: B8C3M7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3M7_THAPS) HSP 1 Score: 293 bits (750), Expect = 7.750e-94 Identity = 139/269 (51.67%), Postives = 194/269 (72.12%), Query Frame = 2
Query: 287 MHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQAS 1093
++ + +W GFFTA+ +Y M S GDFSFLMT+ A +R FGF +LNV+ F+ K A GVS KTL LY +VF RL SI+RHEGYLPYD+SGD++YH+ EI + + AL+ F ++YQ D D FG +++P G +YL +P ++AVFVHP+LN+DFVSD AWT +MYLES ALVPQL+MFQ+Q G+VE+L +H V ALGF RV++ +FW+YSYHEL+ ++G+K G L +QF+ + +M DFF+YY++++K + LP S
Sbjct: 6 LNKNVIMWAGFFTASLFVYFMMSGGDFSFLMTYGAMSRMFGFGILNVKTFMSKRATGVSVKTLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEILALVFTASALWGCMVPFKQTYQADQDKFGEMNVPPGAGAVYLAVPVMLLAVFVHPNLNSDFVSDVAWTYAMYLESVALVPQLFMFQKQQSGVVELLTAHFVAALGFGRVMEFMFWVYSYHELATSAGSKLPGYLALFSQFMQLVLMLDFFWYYYLAVKNATPLVLPSHGS 274
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A7S2H0H3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H0H3_9STRA) HSP 1 Score: 293 bits (751), Expect = 9.220e-93 Identity = 139/272 (51.10%), Postives = 193/272 (70.96%), Query Frame = 2
Query: 278 VRKMHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQAS 1093
++ ++ + +W GFF+ + +Y + S GDFSFLMT+ A R FGF +LNV+ F K A GVS KTL LY +VF RL SI+RHEGYLPYD+SGD++YH+ EI + + AL+ F +YQ D D FG +++P+ G +YL +P +VA+F+HP+LN+DF+SD AWT +MYLES ALVPQLYMFQ+QA G+VE+L +H V ALGF RVL+ FW+YSYHEL+ ++G+K G + +QFV + +M DFFYYY++++K M LP S
Sbjct: 90 LQALNQNVIMWAGFFSVSLFVYFVLSGGDFSFLMTYGAMARMFGFGILNVKTFTSKRATGVSIKTLQLYSMVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEIMALIFTSSALYGCMFPFKSTYQADADKFGEINVPSGLGAVYLAVPVLLVALFIHPNLNSDFLSDVAWTYAMYLESVALVPQLYMFQKQATGVVELLTAHFVAALGFGRVLEFAFWIYSYHELASSNGSKLPGYLAILSQFVQLVLMLDFFYYYYVAVKNATPMVLPSHTS 361
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Match: A0A7S0AL10_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AL10_9STRA) HSP 1 Score: 293 bits (750), Expect = 1.670e-92 Identity = 135/269 (50.19%), Postives = 194/269 (72.12%), Query Frame = 2
Query: 287 MHNQIGVWFGFFTAAFALYTMFSDGDFSFLMTFAAFTRTFGFALLNVRMFIKKHAKGVSRKTLYLYVVVFGSRLVSILRHEGYLPYDRSGDFVYHIAEITSGLLAVLALFFMHTKFARSYQKDYDSFGNLHLPNEWGLLYLLIPCTVVAVFVHPSLNNDFVSDTAWTLSMYLESCALVPQLYMFQRQAKGIVEVLVSHCVFALGFARVLDMVFWLYSYHELSDASGNKTVGVFVLGTQFVHIAVMGDFFYYYFISLKTGDMMQLPMQAS 1093
++ + +W GFFTA+ +Y + S GDFSFLMT+ A +R FGF +LN++ F+ K A GVS KTL LY +VF RL SI+RHEGYLPYD+SGD++YH+ EI + + A + F ++YQ D D FG +++P+ +G +YL +P ++A+ VHP+LN+DF+SD AWT +MYLES AL+PQLYMFQ+Q G+VE+L +H V ALGF R+L+ FW+YSYHEL+ A+G+K G L +QF+ + +M DFF+YY++++K + LP Q S
Sbjct: 101 LNKNVMIWAGFFTASLFVYFVLSGGDFSFLMTYGAMSRMFGFGILNIKTFMSKRATGVSIKTLQLYCLVFFFRLTSIIRHEGYLPYDKSGDWLYHVIEILALIFTASACWGCMGPFKQTYQPDQDRFGEMNVPSGYGAVYLAVPIMILAILVHPNLNSDFLSDVAWTYAMYLESVALIPQLYMFQKQTSGVVELLTAHFVAALGFGRLLEFAFWVYSYHELATAAGSKLPGYLALFSQFMQLVLMLDFFWYYYMAVKNATPLVLPTQGS 369 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1051.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1051.3.3 >prot_C-australica_Contig_1051.3.3 ID=prot_C-australica_Contig_1051.3.3|Name=mRNA_C-australica_Contig_1051.3.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=293bp MSSPYQTYASSPRPSLEMVRKMHNQIGVWFGFFTAAFALYTMFSDGDFSFback to top mRNA from alignment at C-australica_Contig_1051:9082..12337- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1051.3.3 ID=mRNA_C-australica_Contig_1051.3.3|Name=mRNA_C-australica_Contig_1051.3.3|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3256bp|location=Sequence derived from alignment at C-australica_Contig_1051:9082..12337- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1051:9082..12337- >mRNA_C-australica_Contig_1051.3.3 ID=mRNA_C-australica_Contig_1051.3.3|Name=mRNA_C-australica_Contig_1051.3.3|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=879bp|location=Sequence derived from alignment at C-australica_Contig_1051:9082..12337- (Chrysoparadoxa australica CS_1217)back to top |