mRNA_C-australica_Contig_10482.1.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10482.1.1 vs. uniprot
Match: A0A222E515_9RHOB (Trypsin-like peptidase domain protein n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E515_9RHOB) HSP 1 Score: 334 bits (857), Expect = 2.280e-110 Identity = 187/193 (96.89%), Postives = 190/193 (98.45%), Query Frame = 1
Query: 25 VDTGASRRDILRQSQAQLNALGCDAGTPDGIMGPRTREAFRRFLAESDVALKVSDLGTAQALDAIRARSGTVCAPVVVAPKPVSRDA-EPVAAPKPAAPTYSMAGSWRWTATCPLGQATGTTVYRSAGGNSFTGTISGSXXXXXXXXVLSGRNFSGTETFGWVTNSANGTLSADGRSLSLSVSNGCSDSARKN 600
V+T ASRRDILRQSQAQLNALGCDAGTPDGIMGPRTREAFRRFLAESDVAL+VSDLGTAQALDAIRARSGTVCAPVVVAPKPVSRDA EPVAAPKPAAPTYSMAGSWRWTATCPLGQATGTTVYRSAGGNSFTGTISGSXXXXXXXXVLSGRNFSGTETFGWVTNSANGTLSADGRSL+LSVSNGCS SARKN
Sbjct: 336 VETEASRRDILRQSQAQLNALGCDAGTPDGIMGPRTREAFRRFLAESDVALEVSDLGTAQALDAIRARSGTVCAPVVVAPKPVSRDAAEPVAAPKPAAPTYSMAGSWRWTATCPLGQATGTTVYRSAGGNSFTGTISGSXXXXXXXXVLSGRNFSGTETFGWVTNSANGTLSADGRSLNLSVSNGCSVSARKN 528
BLAST of mRNA_C-australica_Contig_10482.1.1 vs. uniprot
Match: A0A0B3S0U3_9RHOB (PKD repeat protein n=7 Tax=Mameliella TaxID=1434019 RepID=A0A0B3S0U3_9RHOB) HSP 1 Score: 246 bits (628), Expect = 4.290e-76 Identity = 130/197 (65.99%), Postives = 150/197 (76.14%), Query Frame = 1
Query: 10 PVAEPVDTGASRRDILRQSQAQLNALGCDAGTPDGIMGPRTREAFRRFLAESDVALKVSDLGTAQALDAIRARSGTVCAPVVVAPKPVSRDAEPVAAPKPAAPTYSMAGSWRWTATCPLGQATGTTVYRSAGGNSFTGTISGSXXXXXXXXVLSGRNFSGTETFGWVTNSANGTLSADGRSLSLSVSNGCSDSARKN 600
PVAEPVD RDILRQ+Q+ LN LGCDAGTPDGI GPRTREAFRRFL +DVAL+ DLGTAQAL+AI+ RSGTVC VV AP P + PAAP YSM G+W W+ATCPLG A+GTT YRSAGGN+FTGTI+G+ L+GR++S TETFGWVTN+A+GTLS DGRSLS+SVSNGC + RKN
Sbjct: 325 PVAEPVDA----RDILRQTQSHLNRLGCDAGTPDGITGPRTREAFRRFLVATDVALEAGDLGTAQALEAIKVRSGTVCKQVVAAPAPEADTPREPGQSTPAAPVYSMVGTWNWSATCPLGVASGTTTYRSAGGNAFTGTITGTSGSGTTRGSLNGRSYSATETFGWVTNTASGTLSKDGRSLSISVSNGCRVTVRKN 517
BLAST of mRNA_C-australica_Contig_10482.1.1 vs. uniprot
Match: UPI001C987BFB (trypsin-like peptidase domain-containing protein n=3 Tax=Rhodobacterales TaxID=204455 RepID=UPI001C987BFB) HSP 1 Score: 208 bits (530), Expect = 1.340e-61 Identity = 110/185 (59.46%), Postives = 134/185 (72.43%), Query Frame = 1
Query: 46 RDILRQSQAQLNALGCDAGTPDGIMGPRTREAFRRFLAESDVALKVSDLGTAQALDAIRARSGTVCAPVVVAPKPVSRDAEPVAAPKPAAPTYSMAGSWRWTATCPLGQATGTTVYRSAGGNSFTGTISGSXXXXXXXXVLSGRNFSGTETFGWVTNSANGTLSADGRSLSLSVSNGCSDSARKN 600
R+ILR+SQA LN LGCDAG DG++GPRTREAFRRFLA + VAL V DLGT +AL AI A SG +C V AP P P+ AAPTYSM G+W W+ATCPLG ATGT+ YRS GGN F+ TI+ + L+GR ++ TET+GW+TNSA+G LSADGRSL+++VSNGC +ARKN
Sbjct: 331 REILRKSQAHLNTLGCDAGAADGVLGPRTREAFRRFLAATGVALTVEDLGTVRALAAITATSGRICKTVAAAP-PAQET------PEAAAPTYSMVGTWSWSATCPLGIATGTSTYRSTGGNGFSATITSTAGPGTTQGTLNGRQYTATETYGWITNSASGRLSADGRSLTMTVSNGCRVTARKN 508
BLAST of mRNA_C-australica_Contig_10482.1.1 vs. uniprot
Match: UPI000D557FCE (caspase family protein n=1 Tax=Tateyamaria sp. Alg231-49 TaxID=1922219 RepID=UPI000D557FCE) HSP 1 Score: 201 bits (512), Expect = 1.060e-58 Identity = 112/195 (57.44%), Postives = 136/195 (69.74%), Query Frame = 1
Query: 22 PVDTGASRRDILRQSQAQLNALGCDAGTPDGIMGPRTREAFRRFLAESDVALKVSDLGTAQALDAIRARSGTVCAPVVVAPKP-VSRDAEPVAAPKPAAPTYSMAGSWRWTATCPLG-QATGTTVYRSAGGNSFTGTISGSXXXXXXXXVLSGRNFSGTETFGWVTNSANGTLSADGRSLSLSVSNGCSDSARKN 600
P + R++LRQ+Q LNALGCDAG PDGIMG RTR AFRRFL+ +D L DLGTA L A++ SG VC KP VS A P A+ KPA P YS+AGSW W+A+CPLG +A+GTT YRS GGN+FTG+ISGS VL+GR++S TE +GWV N++ GTLS DGR+LS VSNGC +ARKN
Sbjct: 341 PAGEASDSREVLRQTQESLNALGCDAGAPDGIMGSRTRAAFRRFLSATDTGLGADDLGTAHGLQALKQHSGRVCKAQPAPSKPAVSATATPDASAKPA-PQYSIAGSWSWSASCPLGLKASGTTRYRSGGGNAFTGSISGSAGPATVRGVLNGRSYSATEDYGWVRNTSTGTLSQDGRTLSTLVSNGCRVTARKN 534
BLAST of mRNA_C-australica_Contig_10482.1.1 vs. uniprot
Match: UPI001C959812 (caspase family protein n=2 Tax=Leisingera TaxID=191028 RepID=UPI001C959812) HSP 1 Score: 132 bits (332), Expect = 1.050e-32 Identity = 85/180 (47.22%), Postives = 110/180 (61.11%), Query Frame = 1
Query: 46 RDILRQSQAQLNALGCDAGTPDGIMGPRTREAFRRFLAESDVALKVSDLGTAQALDAIRARSGTVCAPVVVAPKPVSRDAEPVAAPKPAAPTYSMAGSWRWTATCPLG-QATGTTVYRSAGGNSFTGTISGSXXXXXXXXV-LSGRNFSGTETFGWVTNSANGTLSADGRSLSLSVSNGC 579
R ++R++QA LN +GC AG PDGI GPRTR AF +LA +D L DLGTA AL+ +R +SG VC APKPVS A AA AAP S+AG+W++ ATC L + TG Y AGGN + G ++ S V L+G+ SGT+ F +T + G L+ADGRS + S S GC
Sbjct: 340 RQVMRETQAALNDIGCQAGRPDGIAGPRTRSAFAAYLAAADSTLGADDLGTAHALEELRQKSGKVCK---TAPKPVSAPAP--AASAEAAPV-SLAGAWKFKATCALVVKVTGNVHYTHAGGNKYHGRLNDSLGQNANTEVYLNGQQLSGTDYFPGITVTWRGRLAADGRSFTASGSTGC 513
BLAST of mRNA_C-australica_Contig_10482.1.1 vs. uniprot
Match: A0A848VVX0_9RHOB (Caspase family protein n=1 Tax=Silicimonas sp. TaxID=2058390 RepID=A0A848VVX0_9RHOB) HSP 1 Score: 119 bits (299), Expect = 4.510e-28 Identity = 83/199 (41.71%), Postives = 108/199 (54.27%), Query Frame = 1
Query: 7 EPVAEPVDTGASRRDILRQSQAQLNALGCDAGTPDGIMGPRTREAFRRFLAESDVALKVSDLGTAQALDAIRARSGTVCAPVVVAPKPVSRDAEPVAAPKPAAPTYSMAGSWRWTATCPLG-QATGTTVYRSAGGNSFTGTISGSXXXXXXXX-VLSGRNFSGTETFGWVTNSANGTLSADGRSLSLSVSNGCSDSARK 597
EP P G RR I+R +Q +LN LGCDAG DGI G RTR AF +L S+ L +DLGT QAL A+R +GT+C P+ + +P P P S+ G+WR+ A CPL TGT+ RSAGG S TGT S +GRNF+ + + NGTLSADG+S + S GC +A++
Sbjct: 325 EPATVPAAPGTDRRAIMRATQVELNRLGCDAGGADGIAGRRTRAAFAAYLQGSNAGLTGNDLGTPQALAALRTETGTICK------LPMDQADDPSIPPSTKGP--SLVGTWRFVANCPLFITTTGTSRIRSAGGASVTGTAQDSLGQALRISGTTAGRNFTIFVRSDSASATENGTLSADGKSYTSQNSLGCRITAKR 515
BLAST of mRNA_C-australica_Contig_10482.1.1 vs. uniprot
Match: A0A1I6YJI1_9RHOB (Uncharacterized protein, contains caspase domain n=2 Tax=Sedimentitalea nanhaiensis TaxID=999627 RepID=A0A1I6YJI1_9RHOB) HSP 1 Score: 117 bits (292), Expect = 4.810e-27 Identity = 77/182 (42.31%), Postives = 103/182 (56.59%), Query Frame = 1
Query: 43 RRDILRQSQAQLNALGCDAGTPDGIMGPRTREAFRRFLAESDVALKVSDLGTAQALDAIRARSGTVCAPVVVAPKPVSRDAEPVAAPKPAAPTYSMAGSWRWTATCPLG-QATGTTVYRSAGGNSFTGTISGSXXXXXXXXV-LSGRNFSGTETFGWVTNSANGTLSADGRSLSLSVSNGCS 582
RR I+R +Q LNA GC AGT DGI+G RTR+AFR++L E+ L +DLGT A A+ R G VC P V AP S A +A +AG+WR+TATC + G+ ++ G N+F G +S S V L+GR+ +GT+ F VT G L+ADG S + + S GCS
Sbjct: 353 RRTIIRDTQLALNAAGCSAGTADGIIGARTRQAFRKWLDETAADLHEADLGTDTARRAVMVRKGRVCPPAVTAPVQPSASAA-----AGSATALGLAGNWRYTATCAFVIKVHGSVRFKRTGPNAFHGNLSDSLGQKANSDVYLNGRDITGTDYFPGVTVRWRGRLAADGNSYTATGSTGCS 529
BLAST of mRNA_C-australica_Contig_10482.1.1 vs. uniprot
Match: A0A1B8S3M6_9RHOB (CASPASE_P20 domain-containing protein n=8 Tax=Rhodobacterales TaxID=204455 RepID=A0A1B8S3M6_9RHOB) HSP 1 Score: 115 bits (289), Expect = 9.600e-27 Identity = 75/180 (41.67%), Postives = 100/180 (55.56%), Query Frame = 1
Query: 46 RDILRQSQAQLNALGCDAGTPDGIMGPRTREAFRRFLAESDVALKVSDLGTAQALDAIRARSGTVCAPVVVAPKPVSRDAEPVAAPKPAAPTYSMAGSWRWTATCPLG-QATGTTVYRSAGGNSFTGTISGSXXXXXXXXV-LSGRNFSGTETFGWVTNSANGTLSADGRSLSLSVSNGC 579
+ ++R +QA LN +GC AG DGI GPRTR AF +LA SD L DLGTA AL+ +R +SG +C P AP+ S +AG+W++ ATC L + TG Y AGGN + G +S S V L+G+ SGT+ F +T + G L+ADGRS + S S GC
Sbjct: 319 KSVMRDTQAALNEIGCQAGRTDGIAGPRTRSAFAAYLAASDSNLGADDLGTAHALEELRQKSGEICKP---APRTASAXXXXXXXXX-----XPLAGAWKFKATCALVVKVTGNVHYTHAGGNKYHGRLSDSLGQNANTEVYLNGQQISGTDYFPGITVTWRGRLAADGRSFTSSGSTGC 490
BLAST of mRNA_C-australica_Contig_10482.1.1 vs. uniprot
Match: A0A2E2PDN8_9RHOB (CASPASE_P20 domain-containing protein n=1 Tax=Pseudooceanicola sp. TaxID=1914328 RepID=A0A2E2PDN8_9RHOB) HSP 1 Score: 113 bits (283), Expect = 8.530e-26 Identity = 84/199 (42.21%), Postives = 110/199 (55.28%), Query Frame = 1
Query: 7 EPVAEPVDTGASRRDILRQSQAQLNALGCDAGTPDGIMGPRTREAFRRFLAESDVALKVSDLGTAQALDAIRARSGTVCAPVVVAPKPVSRDAEPVAAPKPAAPTYSMAGSWRWTATCPLG-QATGTTVYRSAGGNSFTGTISGSXXXXXXXXV-LSGRNFSGTETFGWVTNSANGTLSADGRSLSLSVSNGCSDSARK 597
EP A P SRRDI+RQ+Q L A GC+AG DG++G RTR AF FLA S L LG+ AL A+ +G+VC V AP P ++ E AA P ++AG+W +TATCPL TGT R AG F GT+S S + L+G F+ TE + T + G LSADG+S + + + GC AR+
Sbjct: 347 EPTA-PAQPDLSRRDIIRQTQQGLTARGCNAGMADGVIGARTRRAFADFLAHSGSTLSPETLGSQAALTAVIRATGSVCK-TVAAPAPGAQP-EQAAASGP-----TLAGTWGFTATCPLFITTTGTVRLRDAGQGRFIGTMSDSLGQTAQLNLQLNGLAFTATEIYPHTTIAGRGRLSADGQSYTSATAAGCKVQARR 537
BLAST of mRNA_C-australica_Contig_10482.1.1 vs. uniprot
Match: A0A1H6VZ97_9RHOB (Uncharacterized protein, contains caspase domain n=1 Tax=Cribrihabitans marinus TaxID=1227549 RepID=A0A1H6VZ97_9RHOB) HSP 1 Score: 107 bits (268), Expect = 9.910e-24 Identity = 71/178 (39.89%), Postives = 100/178 (56.18%), Query Frame = 1
Query: 55 LRQSQAQLNALGCDAGTPDGIMGPRTREAFRRFLAESDVALKVSDLGTAQALDAIRARSGTVCAPVVVAPKPVSRDAEPVAAPKPAAPTYSMAGSWRWTATCPLG-QATGTTVYRSAGGNSFTGTISGSXXXXXXXXV-LSGRNFSGTETFGWVTNSANGTLSADGRSLSLSVSNGCS 582
+R +QA LNA GC AG DG++GPRTR AF RF+ S +L LG+ AL AI A VC P AP+ + A A PAA +++GSW++ A C L + TGT +R +G N++ G ++ S V L+ R +GT+ F VT G ++ADG+S + + S GCS
Sbjct: 363 IRATQAALNAAGCSAGGADGVIGPRTRSAFARFIDASGASLNPDGLGSVDALRAIEAAGRNVCKP---APRQAPQSASATA---PAAGGLTLSGSWKYRANCVLVVKVTGTVTFRKSGANAYHGRLADSLGQRANSDVYLNSREITGTDYFPGVTVKWRGRMAADGQSYTATGSTGCS 534 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10482.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10482.1.1 >prot_C-australica_Contig_10482.1.1 ID=prot_C-australica_Contig_10482.1.1|Name=mRNA_C-australica_Contig_10482.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=201bp AAEPVAEPVDTGASRRDILRQSQAQLNALGCDAGTPDGIMGPRTREAFRRback to top mRNA from alignment at C-australica_Contig_10482:179..781- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10482.1.1 ID=mRNA_C-australica_Contig_10482.1.1|Name=mRNA_C-australica_Contig_10482.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=603bp|location=Sequence derived from alignment at C-australica_Contig_10482:179..781- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10482:179..781- >mRNA_C-australica_Contig_10482.1.1 ID=mRNA_C-australica_Contig_10482.1.1|Name=mRNA_C-australica_Contig_10482.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=603bp|location=Sequence derived from alignment at C-australica_Contig_10482:179..781- (Chrysoparadoxa australica CS_1217)back to top |