mRNA_C-australica_Contig_1048.3.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1048.3.1
Unique NamemRNA_C-australica_Contig_1048.3.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1048.3.1 vs. uniprot
Match: A0A397UJY0_9GLOM (Diphthine--ammonia ligase n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397UJY0_9GLOM)

HSP 1 Score: 155 bits (392), Expect = 2.070e-40
Identity = 90/197 (45.69%), Postives = 119/197 (60.41%), Query Frame = 2
Query:  140 KRALVSWTGGKDCHLAL--LECRRSEYDIVALVTFAPEATKPFLSHPIPLMKLQAEALGIPHQVQLLKTSTDGITYEEAYRQGMASLAKQHNATHLITGDILDVCSGFMPRAAAGSGLEIVRPLWQREREVMVADIHKAGMEVTISCANIELCGEELARQLVGSQLEGEALRLLRAHGSVDLSGEGGEYHTMVTFVP 724
            K+  +S+TGGKDC L L  L  +  +Y+IV+L+TF P  TKPFL+HP  L+KLQ+ AL +PHQ   +        Y E+YR    SL    N   L TGDILDVC+ FM R    + +E+VRPLW+RER  ++ +I K   EV ISC N+E   EE+AR+LVG+ L  +    +     VD  GE GEYH+MV   P
Sbjct:   12 KKLCLSYTGGKDCTLTLHLLSAQPEKYNIVSLITFTPATTKPFLAHPQHLIKLQSLALNLPHQFLSVTPP-----YVESYR----SLIVSCNIDALATGDILDVCNRFMDRVIESTDIELVRPLWERERTELIEEIFKLEFEVLISCVNLEKIKEEVARKLVGNILTRDLYENVILKQDVDGCGEMGEYHSMVLNAP 199          
BLAST of mRNA_C-australica_Contig_1048.3.1 vs. uniprot
Match: UPI000645121A (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000645121A)

HSP 1 Score: 155 bits (391), Expect = 4.270e-40
Identity = 96/225 (42.67%), Postives = 136/225 (60.44%), Query Frame = 2
Query:  143 RALVSWTGGKDCHLALLECRRSEYDIVALVTFAPEAT--KPFLSHPIPLMKLQAEALGIPHQVQLLKTSTDGITYEEAYRQGMAS-LAKQHNATHLITGDILDVCSGFMPRAAAGSGLEIVRPLWQREREVMVADIHKAGMEVTISCANIE----------LCGEELARQLVGS--QLEGEALRLLRAHG------SVDLSGEGGEYHTMVTFVPGIYNHPIKLG 754
            RA++S+TGGKDC LAL     S YD+VALVTFAP AT  KPF +HP+ L+ +QA+ALG+PH    +    DG  Y ++YRQ + + L ++    +LITGDILDVC+ FM RA   +G+E+VRPL++  R+ ++ D+     +V +SCAN+           L G++L  QL+     L  E L+  +  G      SVDL+GE GE+HTMV   P   +  I +G
Sbjct:    5 RAVISFTGGKDCTLALHRLNDS-YDVVALVTFAPSATRDKPFKAHPLTLVAIQAQALGLPHHTVYI----DGPNYLDSYRQQITTKLREELIVRYLITGDILDVCNNFMGRAVETTGVELVRPLFELPRQNILDDVFARNFKVIVSCANVTKFGPSFDMSTLVGQQLTPQLIQHLRDLNAERLKQQQVDGDGSGGPSVDLAGEYGEFHTMVLDAPLFKHGSINIG 224          
BLAST of mRNA_C-australica_Contig_1048.3.1 vs. uniprot
Match: A0A1Y2G929_9FUNG (Diphthine--ammonia ligase n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2G929_9FUNG)

HSP 1 Score: 148 bits (374), Expect = 7.670e-38
Identity = 93/236 (39.41%), Postives = 143/236 (60.59%), Query Frame = 2
Query:  140 KRALVSWTGGKDCHLALLECRRSEYDIVALVTFAPEATKPFLSHPIPLMKLQAEALGIPHQVQLLKTSTDGITYEEAYRQGMASLAKQHNATHLITGDILDVCSGFMPRAAAGSGLEIVRPLWQREREVMVADIHKAGMEVTISCANIELCG--EELARQLVGSQLEGEALR--LLRAHGSVDLSGEGGEYHTMVTFVPGIYNHPIKLGEFSCEGEGLPHQKVTDCRKFLHLAWDH 835
            KRA VS+TGGKDC LAL    RS +D+V LVTF P+    F +H +  ++LQA+AL IPH   L++   +G T+ + YR+ +  + +++N   L+TGDIL+VC  FM RA  G  +E+  P+W  +R  ++  + +   ++ I+CA+I+  G  E+LAR+ VGS+L  E +   L      VD+ GE GE+HTMV  VP +YN       +  E +G  HQ V    +F+++A+D+
Sbjct:    5 KRAAVSFTGGKDCTLAL-SMTRSTHDVVLLVTFGPKNFTSFKAHSLEFIQLQAKALDIPHI--LIEVGEEGKTHLQCYREQIERIKQEYNLNLLVTGDILNVCDNFMARATEGI-IELSCPIWAIDRHRLLDTLFERQFQLLITCASIKKLGNDEDLARKFVGSRLTPEFVTSILEPRENEVDMGGELGEFHTMVLTVPELYNG------YHIEFDG--HQVVEG--EFMYMAFDN 226          
BLAST of mRNA_C-australica_Contig_1048.3.1 vs. uniprot
Match: A0A8H7PRM3_MORIS (Diphthine--ammonia ligase n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7PRM3_MORIS)

HSP 1 Score: 147 bits (371), Expect = 3.190e-37
Identity = 86/222 (38.74%), Postives = 127/222 (57.21%), Query Frame = 2
Query:  140 KRALVSWTGGKDCHLALLECRRS-EYDIVALVTFAPEATKPFLSHPIPLMKLQAEALGIPHQVQLLKTSTDGITYEEAYRQGMASLAKQHNATHLITG--------------------DILDVCSGFMPRAAAGSGLEIVRPLWQREREVMVADIHKAGMEVTISCANIELCGEEL-ARQLVGSQLEGEALRLLRAHGS-----VDLSGEGGEYHTMVTFVP 724
            ++  + +TGGKDC LAL     S +YDI  LVTFAP   + F +HP+P++++Q ++LGIPH+V L+    +G  +  +Y++ + S+ +++    L+TG                    DILDVC  FMPRA  G+G+E++RPLW+  R  ++ DI K G EV ISC N+     +L     VG +L  E L+ +R H       VDL+GE GE+HTMV   P
Sbjct:    4 RKTALCFTGGKDCTLALHRTIESGQYDISLLVTFAPANMQKFKAHPLPIVQMQTQSLGIPHRVYLV----EGPDFLGSYQKHITSIKEEYGIDALVTGKVLLYDGLDFNLAILTLFQGDILDVCHNFMPRAVEGTGVELIRPLWELPRSEILEDIWKHGFEVLISCLNVTKFDTDLDVETFVGKRLSKELLQKVRDHNEKFGRDVDLAGEFGEFHTMVLDAP 221          
BLAST of mRNA_C-australica_Contig_1048.3.1 vs. uniprot
Match: A0A197KAX8_9FUNG (Diphthine--ammonia ligase n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197KAX8_9FUNG)

HSP 1 Score: 145 bits (366), Expect = 1.060e-36
Identity = 82/203 (40.39%), Postives = 130/203 (64.04%), Query Frame = 2
Query:  140 KRALVSWTGGKDCHLALLECRRSEYDIVALVTFAPEATKPFLSHPIPLMKLQAEALGIPHQVQLLKTSTDGITYEEAYRQGMASLAKQHNATHLITGDILDVCSGFMPRAAAGSGLEIVRPLWQREREVMVADIHKAGMEVTISCANIELCG--EELARQLVGSQLEGEALR--LLRAHGSVDLSGEGGEYHTMVTFVPGIYN 736
            KRA +S+TGGKDC LA+   +++ +D+V LVTF P+  K F +H + +++LQA+A+G+ H   L++   +G T+ + YR+ +A + +++N   L+TGDIL+VC  FM RA     +E+  P+W  +R  ++  + +   E+ I+CA+I+  G  E LAR+ VGS+L  E +   L     +VDL GE GE+HTMV  VP +YN
Sbjct:    6 KRAAISFTGGKDCTLAMAMTKKA-HDVVLLVTFGPKNFKSFKAHSLEIIRLQAKAMGVEHI--LVEIGEEGKTHLQCYREAIAEIKEKYNLDLLVTGDILNVCDNFMTRATQDI-IELSSPIWAIDRHKLLDTLFEHKFELLITCASIKKLGDDENLARKFVGSKLTPEFVEETLKPQEKTVDLGGELGEFHTMVLTVPELYN 204          
BLAST of mRNA_C-australica_Contig_1048.3.1 vs. uniprot
Match: A0A8H7EVI8_9FUNG (Diphthine--ammonia ligase n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7EVI8_9FUNG)

HSP 1 Score: 142 bits (359), Expect = 8.720e-36
Identity = 82/213 (38.50%), Postives = 119/213 (55.87%), Query Frame = 2
Query:  140 KRALVSWTGGKDCHLALLECRRSEYDIVALVTFAPEATKPFLSHPIPLMKLQAEALGIPHQVQLLKTSTDGITYEEAYRQGMASLAKQHNATHLITGDILDVCSGFMPRAAAGSGLEIVRPLWQREREVMVADIHKAGMEVTISCANI-ELCGEELARQLVGSQLEGEALRLLRAHGSVDLSGEGGEYHTMVTFVPGIYNHPIKLGEFSCEGE 775
            K+A +S+TGGKDC LAL       +D+  LVTF P     F SHP+ +M+ Q  ALGIPH++ +++    G  Y ++YR+ +  L  +     L+TGD++ VCS FM RA   +G+E+VRPLWQ  R  ++ +I     +  I+C  I + C EELA   +G  L  E +  +   GS   SGE GE+HTMV   P ++ H     +  C  E
Sbjct:    5 KKAAISFTGGKDCILALHRVVDQGFDVAVLVTFCPPTDVEFRSHPLQIMEQQVRALGIPHRLCIVQ----GPDYLQSYRENLRQLRLEFGIDSLVTGDVVPVCSNFMERAVQETGVELVRPLWQCNRLELLEEIRDRSFQAAITCIRIRKFCEEELAIASIGQDLSLEWIETV-GQGS---SGEHGEFHTMVLDAP-LFVHGKVAAQIQCSTE 208          
BLAST of mRNA_C-australica_Contig_1048.3.1 vs. uniprot
Match: A0A8H7Q7G2_9FUNG (Diphthine--ammonia ligase n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7Q7G2_9FUNG)

HSP 1 Score: 149 bits (376), Expect = 1.740e-34
Identity = 85/202 (42.08%), Postives = 121/202 (59.90%), Query Frame = 2
Query:  140 KRALVSWTGGKDCHLALLECRRSE-YDIVALVTFAPEATKPFLSHPIPLMKLQAEALGIPHQVQLLKTSTDGITYEEAYRQGMASLAKQHNATHLITGDILDVCSGFMPRAAAGSGLEIVRPLWQREREVMVADIHKAGMEVTISCANIELCGEEL-ARQLVGSQLEGEALRLLRAHG-----SVDLSGEGGEYHTMVTFVP 724
            ++A + +TGGKDC LAL    RSE +DI  LVTFAP   + F +HP+ ++++Q +++GIPH+V L+    DG  +  +YR  +  L +++    L+TGDILDVC  FMPRA   +G+E+VRPLW+  R  ++ DI     +V +SC NI      L     VG +L  E L  +R H       VDL+GE GE+HTMV   P
Sbjct:    4 RKAALCFTGGKDCTLALHRAVRSEEFDICLLVTFAPANMQKFKAHPMSVVEMQTQSIGIPHKVCLV----DGPDFLGSYRTHITGLKEEYGIEALVTGDILDVCHSFMPRAVETTGVELVRPLWEAPRSEILEDIWTQQFDVLVSCLNITKFDSGLDIESFVGKKLTRELLEKVREHNVKSGLDVDLAGEYGEFHTMVLDAP 201          
BLAST of mRNA_C-australica_Contig_1048.3.1 vs. uniprot
Match: A0A163K0S2_ABSGL (Diphthine--ammonia ligase n=1 Tax=Absidia glauca TaxID=4829 RepID=A0A163K0S2_ABSGL)

HSP 1 Score: 136 bits (343), Expect = 1.630e-33
Identity = 85/208 (40.87%), Postives = 114/208 (54.81%), Query Frame = 2
Query:  152 VSWTGGKDCHLALLECRRSEYDIVALVTFAPEATKPFLSHPIPLMKLQAEALGIPHQVQLLKTSTDGITYEEAYRQGMASLAKQHNATHLITGDILDVCSGFMPRAAAGSGLEIVRPLWQREREVMVADIHKAGMEVTISCANIELCGEELARQL--VGSQLEGEALRLLRAHGSVDLSGEGGEYHTMVTFVPGIYNHPIKLGEFSCE 769
            VS+TGGKDC LAL       + +  LVTFAP   KPF +HP+ ++K QA+ALGIPH +     + +G  Y E+YR+ +  L K +    L+TGDIL VCS FM RA A   + ++RPLWQ  R+ ++ DI K    V ++C N          Q   VG  L  E L+        DL+GE GE+HTMV   P   N  IK+  +  E
Sbjct:    8 VSFTGGKDCCLALHRVVDEGFHVAVLVTFAPP-DKPFRAHPMSIIKQQAQALGIPHVI----CTIEGPRYLESYREKLEELKKVYGIEALVTGDILQVCSDFMERACADI-VTLIRPLWQLSRQGLLEDIWKRPFSVMVTCINRRKLPSSSTNQGSGVGDLLSLEWLKKHAEKDDADLAGEYGEFHTMVMDAPLFINGTIKVTGYQKE 209          
BLAST of mRNA_C-australica_Contig_1048.3.1 vs. uniprot
Match: T0QTN3_SAPDV (Diphthine--ammonia ligase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QTN3_SAPDV)

HSP 1 Score: 134 bits (338), Expect = 9.000e-33
Identity = 85/217 (39.17%), Postives = 114/217 (52.53%), Query Frame = 2
Query:  143 RALVSWTGGKDCHLALLECRRSEYDIVALVTFAPEATKPFLSHPIPLMKLQAEALGIPHQVQLLKTSTDGITYEEAYRQGMASLAKQHNATHLITGDILDV---CSGFMPRAAAGSGLEIVRPLWQREREVMVADIHKAGMEVTISC---ANIELCGEELARQLVGSQLEGEALRLLRAHGSVDLSGEGGEYHTMVTFVPGIYNHPIKLGEFSCEGE 775
            R+ VSWTGGKDC +AL E + + +DI  LVTFAPE    F +HPIPLM+ QA A+G+PH    ++      +YE A R     L   H    LITGDI  +    S FM    AG G+ I  PLWQR RE ++  + +    V  SC   A+       L R++    L+   L +L A   VD+ GE GEYHTMV + P   +  +    +S E +
Sbjct:    2 RSAVSWTGGKDCAMALYEAKAAGHDIALLVTFAPENPS-FRAHPIPLMEAQAAAIGLPHLFLTIRPPDYNGSYEAALRH----LQNDHGIACLITGDIDLIGASTSNFMNERCAGVGMAIFTPLWQRPREALIQLVLERDFHVVFSCVKEASFNDAAAWLGRRITRDALDD--LCVLHASHGVDVCGENGEYHTMVLYAPYFSSRVLLPSSWSIESK 211          
BLAST of mRNA_C-australica_Contig_1048.3.1 vs. uniprot
Match: A0A1V9Z7R7_9STRA (Diphthine--ammonia ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z7R7_9STRA)

HSP 1 Score: 134 bits (338), Expect = 9.240e-33
Identity = 85/226 (37.61%), Postives = 124/226 (54.87%), Query Frame = 2
Query:  146 ALVSWTGGKDCHLALLECRRSEYDIVALVTFAPEATKPFLSHPIPLMKLQAEALGIPHQVQLLKTSTDGITYEEAYRQGMASLAKQHNATHLITGDILDV---CSGFMPRAAAGSGLEIVRPLWQREREVMVADIHKAGMEVTISCANIELCGEELARQLVGSQLEGEALRLLRA-HGS--VDLSGEGGEYHTMVTFVPGIYNHPIKLGEFSCEG-EGLPHQKVTD 802
            A VSWTGGKDC LAL E      ++  LVTFAPE    F +HPIPLMK QA A+G+PH    ++       Y+E+Y   +  L +++  T+L+TGDI  +    + +M    A  G++I  PLWQR RE ++  + +    +  SC  ++      ++  +G  ++  AL  LRA H S  VD+ GE GEYHTMV   P  ++H + L  F+ E  +GL   +  D
Sbjct:    2 AAVSWTGGKDCALALHEATAHGLEVRLLVTFAPENPS-FRAHPIPLMKAQAAAIGLPHMFLTIRPPA----YDESYEAALRQLQEEYGITYLVTGDIDFIGASTTNYMNERCAAVGMDIFTPLWQRPRESLIQRLLECRFHIIFSC--VKEASFPDSKAWLGRTIDATALADLRALHASRGVDVCGENGEYHTMVLGAP-YFDHTLLLPPFTIESKDGLSCLRFED 219          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1048.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A397UJY0_9GLOM2.070e-4045.69Diphthine--ammonia ligase n=2 Tax=Gigaspora TaxID=... [more]
UPI000645121A4.270e-4042.67hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A1Y2G929_9FUNG7.670e-3839.41Diphthine--ammonia ligase n=1 Tax=Lobosporangium t... [more]
A0A8H7PRM3_MORIS3.190e-3738.74Diphthine--ammonia ligase n=1 Tax=Mortierella isab... [more]
A0A197KAX8_9FUNG1.060e-3640.39Diphthine--ammonia ligase n=1 Tax=Linnemannia elon... [more]
A0A8H7EVI8_9FUNG8.720e-3638.50Diphthine--ammonia ligase n=1 Tax=Apophysomyces os... [more]
A0A8H7Q7G2_9FUNG1.740e-3442.08Diphthine--ammonia ligase n=1 Tax=Umbelopsis vinac... [more]
A0A163K0S2_ABSGL1.630e-3340.87Diphthine--ammonia ligase n=1 Tax=Absidia glauca T... [more]
T0QTN3_SAPDV9.000e-3339.17Diphthine--ammonia ligase n=1 Tax=Saprolegnia dicl... [more]
A0A1V9Z7R7_9STRA9.240e-3337.61Diphthine--ammonia ligase n=1 Tax=Achlya hypogyna ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1048contigC-australica_Contig_1048:2711..4959 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog78898.MVEG_02736T0
PFAMsDiphthami_syn_2
Model size1580
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons8
Evalue7.82e-40
EggNOG OGs2DEY5@1|root,2S5R6@2759|Eukaryota,3A6AW@33154|Opisthokonta,3P69N@4751|Fungi
DescriptionAllomyces macrogynus ATCC 38327
Cds size822
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1048.3.1prot_C-australica_Contig_1048.3.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1048 3812..4940 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586783.9052434-UTR-C-australica_Contig_1048:2710..28351682586783.9052434-UTR-C-australica_Contig_1048:2710..2835Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1048 2711..2835 -
1682586783.9152985-UTR-C-australica_Contig_1048:2922..29831682586783.9152985-UTR-C-australica_Contig_1048:2922..2983Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1048 2923..2983 -
1682586783.9238653-UTR-C-australica_Contig_1048:3133..32111682586783.9238653-UTR-C-australica_Contig_1048:3133..3211Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1048 3134..3211 -
1682586783.9336374-UTR-C-australica_Contig_1048:3336..38111682586783.9336374-UTR-C-australica_Contig_1048:3336..3811Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1048 3337..3811 -
1682586784.0060325-UTR-C-australica_Contig_1048:4940..49591682586784.0060325-UTR-C-australica_Contig_1048:4940..4959Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1048 4941..4959 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586783.947503-CDS-C-australica_Contig_1048:3811..39431682586783.947503-CDS-C-australica_Contig_1048:3811..3943Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1048 3812..3943 -
1682586783.9573052-CDS-C-australica_Contig_1048:4012..41001682586783.9573052-CDS-C-australica_Contig_1048:4012..4100Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1048 4013..4100 -
1682586783.9701943-CDS-C-australica_Contig_1048:4190..45161682586783.9701943-CDS-C-australica_Contig_1048:4190..4516Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1048 4191..4516 -
1682586783.983275-CDS-C-australica_Contig_1048:4581..47171682586783.983275-CDS-C-australica_Contig_1048:4581..4717Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1048 4582..4717 -
1682586783.9971366-CDS-C-australica_Contig_1048:4800..49401682586783.9971366-CDS-C-australica_Contig_1048:4800..4940Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1048 4801..4940 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1048.3.1

>prot_C-australica_Contig_1048.3.1 ID=prot_C-australica_Contig_1048.3.1|Name=mRNA_C-australica_Contig_1048.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=274bp
MDLILNVGAAPLRHRKGRHCILLLVRREGHHTSDRRHPMAKRALVSWTGG
KDCHLALLECRRSEYDIVALVTFAPEATKPFLSHPIPLMKLQAEALGIPH
QVQLLKTSTDGITYEEAYRQGMASLAKQHNATHLITGDILDVCSGFMPRA
AAGSGLEIVRPLWQREREVMVADIHKAGMEVTISCANIELCGEELARQLV
GSQLEGEALRLLRAHGSVDLSGEGGEYHTMVTFVPGIYNHPIKLGEFSCE
GEGLPHQKVTDCRKFLHLAWDHE*
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mRNA from alignment at C-australica_Contig_1048:2711..4959-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1048.3.1 ID=mRNA_C-australica_Contig_1048.3.1|Name=mRNA_C-australica_Contig_1048.3.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2249bp|location=Sequence derived from alignment at C-australica_Contig_1048:2711..4959- (Chrysoparadoxa australica CS_1217)
GTAATAGGTTTTGGGCTCCATGGATTTGATCCTCAACGTGGGAGCAGCCC CATTGAGGCATAGAAAAGGGAGACACTGTATACTACTCCTCGTGAGGCGT GAGGGGCATCATACCTCGGACAGAAGGCATCCGATGGCAAAGAGGGCGCT CGTATCATGGTCTCATACTCTCTCTCCCTTCCCTCCTTCTCTCCCCCTTT CAGCAGCCTCAGCTCAACCTACCACATCCTGACCGCTCACAGGACTGGTG GGAAGGATTGCCACTTAGCTCTCCTGGAATGCCGCCGCAGCGAATATGAT ATCGTTGCACTCGTGACCTTCGCCCCAGAAGCTACCAAACCCTTCCTCTC CCACCCCATCCCACTGATGAAGCTGCAGGTAGGGAGTTAGGAAGGCGGAC GTACCACTCATGCACCTCCTTACATCCCCTCCTACTTTATCAGGCTGAAG CACTTGGCATCCCTCATCAAGTCCAACTGCTCAAGACCTCAACTGACGGG ATCACTTATGAGGAAGCCTACAGGCAGGGGATGGCTTCCTTGGCAAAGCA GCACAATGCAACACATCTCATTACTGGTGATATACTAGATGTTTGCTCCG GTTTTATGCCCAGAGCTGCGGCAGGGTCCGGATTAGAGATTGTACGGCCT TTATGGCAGCGTGAAAGAGAAGTAATGGTGGCTGACATTCATAAAGCTGG GATGGAGGTCACCATCAGCTGCGCCAACATTGAGCTATGCGGGGAAGAGC TGGCACGACAACTTGTCGGGTAAGTCTCTAATATCAAGCACTGGCGACTC AGTCATAGTGAAGGAAGAGAAGGACAGCTAGGAGTTTGCTCATGGCCTTT CTTTTGCAGCTCACAGCTGGAAGGGGAAGCCCTTCGCCTTCTTAGGGCCC ACGGAAGCGTGGACTTGTCTGGAGAAGGCGGAGAGTACCATACCATGGTA AACGAGGAATCATACCATGGTTAGGCCTACTAACCTCTAACTTGAAAGGA ATTTGCTGCACTGCAGGTGACTTTTGTGCCTGGGATATATAATCACCCCA TCAAGCTTGGGGAATTCTCATGCGAAGGAGAAGGACTGCCTCACCAGAAA GTTACGGACTGTCGGAAATTCCTTCACTTGGCGTGGGATCATGAGTGAAA GAGTGATACTGAAGTGAAGCTTGGTGTAGGAAAGGGCAGCAAGAGCCTAG TGTGAGCGCATCATGCCCTATGTAAAAAGGTATGATCTGAGCAGCAGGCA GTAGGCAGGAAGAGAGAGGACTGCAGGCCAACAAGTTGCTGATGCAGCTG CTTGCAATTGCTGTCGAGGCGAACTGCCCCACAATCAACGAGAGCCACCG CTATCCCCTTTGGCTTCCATGCCTGTAGCTGTAGCAGTGGCTGTGGCTGG GGCTGCTTTGGATTGTTTGGCTAGCCATTCTTAGTCGCCAAGGCTGGCAT GGTAAAAAAATGAGGTGACGCGCTCTCCCTCGTGCCAGGCATGGCCTTTG GCATCGGTGCTATGATGAGCTGAGCTGGCTAATGATGGCGCATGTAAGCT AAAAGTGATCAAACGTTCTTCTTTGCGCTATATGTCTTGAGCAGTGTAAA CAGCAGAGCAACGCCGTATCCTGAAGAGCAAGCCAATTAGTAAGTGAGGT TACCGCAAGGTGGGAACCCTCACACAATGGGAGGCAGGAGTGTGATGATA ACATTATGGTAACAAAGCACCAGAGTGGTATGGACATGTACATACCTGTG GCTCGCTCTCCTACGTATGAAGAGGATGCCATATCAATGTGCAGCCAAGC ACCGTGTGTTTGGTAGTCACCTTCAGGCAAGGTAAGATAAGTTAAGGATA AGCTAAATTCCATCATTCTAGGTCTGCTCAGTCAAGGGCGCAGTTTGTTC TTTTGCAGAGGCACCAAACCTCACTCGAGCATGGCATAGCAAGCAACCCC AACGGCCACAATGGCAACGCACCAAGGTGATTTCCAATGAACTGAGCAGC ACAGGAAACTTGTGCATTGGAGCGGCAGGCAACCCTAGTAGAGAGGGGAC AAGTGCACAGGACAGGGAAGTGACTGCCTGCCCAGCCAGGGAAGGCAAGG CAAGTCACTGCAGGGACTTACGAGTTCTTCATGTCCGCTACAGCACTCTT GAATTCAGAAGCATAGAGCTCCGGTCCGTACGGCACCGGGTGAGTCAGAT CACCGCTCAGCTTTCCTGCTAGGACAGCCTTCTGCTCAAGCGTTTCATC
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Coding sequence (CDS) from alignment at C-australica_Contig_1048:2711..4959-

>mRNA_C-australica_Contig_1048.3.1 ID=mRNA_C-australica_Contig_1048.3.1|Name=mRNA_C-australica_Contig_1048.3.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=822bp|location=Sequence derived from alignment at C-australica_Contig_1048:2711..4959- (Chrysoparadoxa australica CS_1217)
ATGGATTTGATCCTCAACGTGGGAGCAGCCCCATTGAGGCATAGAAAAGG
GAGACACTGTATACTACTCCTCGTGAGGCGTGAGGGGCATCATACCTCGG
ACAGAAGGCATCCGATGGCAAAGAGGGCGCTCGTATCATGGACTGGTGGG
AAGGATTGCCACTTAGCTCTCCTGGAATGCCGCCGCAGCGAATATGATAT
CGTTGCACTCGTGACCTTCGCCCCAGAAGCTACCAAACCCTTCCTCTCCC
ACCCCATCCCACTGATGAAGCTGCAGGCTGAAGCACTTGGCATCCCTCAT
CAAGTCCAACTGCTCAAGACCTCAACTGACGGGATCACTTATGAGGAAGC
CTACAGGCAGGGGATGGCTTCCTTGGCAAAGCAGCACAATGCAACACATC
TCATTACTGGTGATATACTAGATGTTTGCTCCGGTTTTATGCCCAGAGCT
GCGGCAGGGTCCGGATTAGAGATTGTACGGCCTTTATGGCAGCGTGAAAG
AGAAGTAATGGTGGCTGACATTCATAAAGCTGGGATGGAGGTCACCATCA
GCTGCGCCAACATTGAGCTATGCGGGGAAGAGCTGGCACGACAACTTGTC
GGCTCACAGCTGGAAGGGGAAGCCCTTCGCCTTCTTAGGGCCCACGGAAG
CGTGGACTTGTCTGGAGAAGGCGGAGAGTACCATACCATGGTGACTTTTG
TGCCTGGGATATATAATCACCCCATCAAGCTTGGGGAATTCTCATGCGAA
GGAGAAGGACTGCCTCACCAGAAAGTTACGGACTGTCGGAAATTCCTTCA
CTTGGCGTGGGATCATGAGTGA
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