mRNA_C-australica_Contig_10475.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10475.1.1
Unique NamemRNA_C-australica_Contig_10475.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10475.1.1 vs. uniprot
Match: A0A2E8D8B9_9PLAN (DUF1080 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8D8B9_9PLAN)

HSP 1 Score: 220 bits (561), Expect = 1.480e-69
Identity = 105/181 (58.01%), Postives = 133/181 (73.48%), Query Frame = 1
Query:   10 SEDSSDWVALFDGTSLDGWTQKNGTATYEVSNGTIVGKTSERSPNSFLCTNKIYQDFDLEFEVKVDKGLNSGVQIRSKTREASIGDSNNEKAGRVIGPQVEI-VEGDSGSLSGYIWREATGDGWMISKGDPAAHTHFKGGEWNKYRILAEGPRIRTWINGNMVEDVTDKETQKDFPQGFIG 549
            S ++ +W +LFDG +LDGW QKNGTATYEV +GTI G T E SPNSFLC+ ++Y DF+LEFEVKV   LNSGVQIRSKT+E + G   N+K GRV GPQVEI    + G+ +GY++ EATG GW+ S      H   K GEWNK+R++A+GPRI+TWING  +ED+TD E  +  P+GFIG
Sbjct:   45 SANAEEWKSLFDGKTLDGWVQKNGTATYEVKDGTIHGTTKEGSPNSFLCSKELYGDFELEFEVKVHDKLNSGVQIRSKTKETASGKKKNDKVGRVYGPQVEIEASSEKGAEAGYVYGEATGRGWLTSSDRLIPHKQMKDGEWNKFRVVAKGPRIQTWINGEQMEDLTDAEIYETHPKGFIG 225          
BLAST of mRNA_C-australica_Contig_10475.1.1 vs. uniprot
Match: UPI001EE8F9C8 (DUF1080 domain-containing protein n=1 Tax=Rubinisphaera sp. ICM_H10 TaxID=2909586 RepID=UPI001EE8F9C8)

HSP 1 Score: 218 bits (554), Expect = 7.030e-69
Identity = 107/176 (60.80%), Postives = 127/176 (72.16%), Query Frame = 1
Query:   25 DWVALFDGTSLDGWTQKNGTATYEVSNGTIVGKTSERSPNSFLCTNKIYQDFDLEFEVKVDKGLNSGVQIRSKTREASIGDSNNEKAGRVIGPQVEI-VEGDSGSLSGYIWREATGDGWMISKGDPAAHTHFKGGEWNKYRILAEGPRIRTWINGNMVEDVTDKETQKDFPQGFIG 549
            +W +LFDG S+DGW QKNGTATY V  G IVGKT+E SPNSFLCT K Y +F+LEFEVKV   LNSGVQIRSKT+E      N+EK GRV GPQVEI   G+ G+ +GY++ EATG GW+  K     H H K GEWN +RI+A GP I+TWINGNMV D+TD+   +  P GFIG
Sbjct:   25 EWKSLFDGKSIDGWIQKNGTATYRVEEGAIVGKTNEGSPNSFLCTPKDYGNFELEFEVKVADQLNSGVQIRSKTKEPK---GNDEKFGRVYGPQVEIEASGEKGAEAGYVYGEATGRGWLTPKDQLIPHKHMKDGEWNSFRIVANGPNIKTWINGNMVSDLTDEAIYETHPSGFIG 197          
BLAST of mRNA_C-australica_Contig_10475.1.1 vs. uniprot
Match: A0A518B2M2_9BACT (DUF1080 domain-containing protein n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518B2M2_9BACT)

HSP 1 Score: 216 bits (551), Expect = 2.210e-68
Identity = 110/176 (62.50%), Postives = 131/176 (74.43%), Query Frame = 1
Query:   25 DWVALFDGTSLDGWTQKNGTATYEVSNGTIVGKTSERSPNSFLCTNKIYQDFDLEFEVKVDKGLNSGVQIRSKTREASIGDSNNEKAGRVIGPQVEIVE-GDSGSLSGYIWREATGDGWMISKGDPAAHTHFKGGEWNKYRILAEGPRIRTWINGNMVEDVTDKETQKDFPQGFIG 549
            DWV +FDG +L+GWTQKNGTATY V +GTIVGKT+E SPNSFLC+NK Y DF+LEFEVKVD GLNSGVQIRSKT+    G    E  GRV GPQVEI   G++G  +GYI+ EA G GWM  +    AH  FK  EWNKYR++A+GPRI+TWING  VED+T ++     P+GFIG
Sbjct:   24 DWVEIFDGKTLEGWTQKNGTATYRVEDGTIVGKTNEGSPNSFLCSNKDYGDFELEFEVKVDPGLNSGVQIRSKTKPLPEG---KEGYGRVNGPQVEIESSGNNGGEAGYIYGEAAG-GWMTPQDSLKAHKKFKDNEWNKYRVVAKGPRIQTWINGEQVEDLTHEKAYGTHPKGFIG 195          
BLAST of mRNA_C-australica_Contig_10475.1.1 vs. uniprot
Match: A0A7V5UL44_9PLAN (DUF1080 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7V5UL44_9PLAN)

HSP 1 Score: 213 bits (541), Expect = 5.450e-67
Identity = 108/184 (58.70%), Postives = 130/184 (70.65%), Query Frame = 1
Query:    1 SATSEDSSDWVALFDGTSLDGWTQKNGTATYEVSNGTIVGKTSERSPNSFLCTNKIYQDFDLEFEVKVDKGLNSGVQIRSKTREASIGDSNNEKAGRVIGPQVEI-VEGDSGSLSGYIWREATGDGWMISKGDPAAHTHFKGGEWNKYRILAEGPRIRTWINGNMVEDVTDKETQKDFPQGFIG 549
            SA +   S WV+LFDG +LDGW QKNGTATY V +G IVGKT+E SPNSFLCT K Y DF+LEF+VKVD  LNSGVQIRSKT+            GRV GPQVEI   G+ G  SGY++ EATG GW+        H +FK G+WN YRI+A+GPRI+TWING+ +ED+TD+   K  P+GFIG
Sbjct:   16 SAPAGGDSGWVSLFDGKTLDGWIQKNGTATYRVEDGCIVGKTAEGSPNSFLCTVKEYGDFELEFDVKVDNRLNSGVQIRSKTK--------GSPTGRVYGPQVEIEAAGEKGCESGYVYGEATGRGWLTPPERLKPHKYFKDGQWNHYRIVAKGPRIQTWINGHKIEDLTDEAIYKTHPRGFIG 191          
BLAST of mRNA_C-australica_Contig_10475.1.1 vs. uniprot
Match: A0A2G2JXJ1_9BACT (DUF1080 domain-containing protein n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2G2JXJ1_9BACT)

HSP 1 Score: 211 bits (537), Expect = 2.350e-66
Identity = 101/175 (57.71%), Postives = 129/175 (73.71%), Query Frame = 1
Query:   25 DWVALFDGTSLDGWTQKNGTATYEVSNGTIVGKTSERSPNSFLCTNKIYQDFDLEFEVKVDKGLNSGVQIRSKTREASIGDSNNEKAGRVIGPQVEIVEGDSGSLSGYIWREATGDGWMISKGDPAAHTHFKGGEWNKYRILAEGPRIRTWINGNMVEDVTDKETQKDFPQGFIG 549
            DWV+LF+G  L GWTQKNG ATY+  +GTI+GKT++ SPNSFLC++K Y +F+LEFEVKVD+GLNSGVQIRSKT++    D  N+K GRV GPQVEI  G +   +GY++ EATG  W+  K     H HFK   WNK+R++A GPRI+TWING+ +ED+   E  K  P+GFIG
Sbjct:   24 DWVSLFNGKDLSGWTQKNGIATYQADHGTILGKTAKGSPNSFLCSDKEYGNFELEFEVKVDEGLNSGVQIRSKTKDTG-SDKKNDKVGRVFGPQVEIESGPA--EAGYVYGEATGLNWLTPKERLIPHDHFKNDGWNKFRVVANGPRIQTWINGHAIEDLKHPEVYKTHPKGFIG 195          
BLAST of mRNA_C-australica_Contig_10475.1.1 vs. uniprot
Match: A0A2E0B321_9BACT (DUF1080 domain-containing protein n=1 Tax=Blastopirellula sp. TaxID=2024826 RepID=A0A2E0B321_9BACT)

HSP 1 Score: 210 bits (534), Expect = 7.620e-66
Identity = 105/175 (60.00%), Postives = 124/175 (70.86%), Query Frame = 1
Query:   28 WVALFDGTSLDGWTQKNGTATYEVSNGTIVGKTSERSPNSFLCTNKIYQDFDLEFEVKVDKGLNSGVQIRSKTREASIGDSNNEKAGRVIGPQVEI-VEGDSGSLSGYIWREATGDGWMISKGDPAAHTHFKGGEWNKYRILAEGPRIRTWINGNMVEDVTDKETQKDFPQGFIG 549
            WV LFDG +L+GWTQKNGTA Y V +GTI G T+E SPNSFLC+NK Y DF+LEFEVKV   LNSG QIRSKT+E       N K GRV GPQVEI   G  G+ +GY++ EATG GW+ SK D   H   K GEWN +RI+A+GP I+TWING  V D+TD+   K  P+GFIG
Sbjct:   25 WVKLFDGKTLNGWTQKNGTAKYSVEDGTIRGVTNEGSPNSFLCSNKDYGDFELEFEVKVHDQLNSGCQIRSKTKETE-SKGKNSKVGRVYGPQVEIEASGSGGAEAGYVYGEATGRGWLTSKEDLKPHKLMKDGEWNHFRIVAKGPHIQTWINGKQVSDLTDEAIYKTHPKGFIG 198          
BLAST of mRNA_C-australica_Contig_10475.1.1 vs. uniprot
Match: A0A518INV0_9BACT (DUF1080 domain-containing protein n=4 Tax=Rosistilla TaxID=2795779 RepID=A0A518INV0_9BACT)

HSP 1 Score: 209 bits (533), Expect = 1.150e-65
Identity = 110/183 (60.11%), Postives = 133/183 (72.68%), Query Frame = 1
Query:    4 ATSEDSSDWVALFDGTSLDGWTQKNGTATYEVSNGTIVGKTSERSPNSFLCTNKIYQDFDLEFEVKVDKGLNSGVQIRSKTREASIGDSNNEKA-GRVIGPQVEIVEGDSGSLSGYIWREATGDGWMISKGDPAAHTHFKGGEWNKYRILAEGPRIRTWINGNMVEDVTDKETQKDFPQGFIG 549
            AT++D   WV+LFDG SL GWTQKNGTATY V +GTIVG+T+  SPNSFLCT+K Y +F+LEFEVKVDKGLNSGVQIRS+T+E      NN+K  GRV GPQVEI  G +   +GY++ EATG GW+        H HF    WNKYRI+A GPRI+TWING M+ED+TD+   +    GFIG
Sbjct:   23 ATADDG--WVSLFDGKSLAGWTQKNGTATYAVEDGTIVGRTAVGSPNSFLCTDKDYGNFELEFEVKVDKGLNSGVQIRSQTKEQE----NNKKGYGRVNGPQVEIESGPA--EAGYVYGEATGRGWLTPAERLKPHDHFDNDGWNKYRIVANGPRIQTWINGEMIEDLTDEPIFETHSNGFIG 197          
BLAST of mRNA_C-australica_Contig_10475.1.1 vs. uniprot
Match: A0A517ZT02_9PLAN (DUF1080 domain-containing protein n=2 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZT02_9PLAN)

HSP 1 Score: 209 bits (532), Expect = 1.270e-65
Identity = 103/176 (58.52%), Postives = 127/176 (72.16%), Query Frame = 1
Query:   25 DWVALFDGTSLDGWTQKNGTATYEVSNGTIVGKTSERSPNSFLCTNKIYQDFDLEFEVKVDKGLNSGVQIRSKTREASIGDSNNEKAGRVIGPQVEI-VEGDSGSLSGYIWREATGDGWMISKGDPAAHTHFKGGEWNKYRILAEGPRIRTWINGNMVEDVTDKETQKDFPQGFIG 549
            +WV LFDG +LDGWTQ+NGTATY V + TIVGKT+  SPNSFLC++K Y DF+LEFEVKV   LNSGVQIRS+T+E           GRV GPQVEI   GD G+ +GYI+ EATG GW+  + +   H  FK GEWNK+R++A GPRI+TWING  + D+TD+   K  P+GFIG
Sbjct:   24 EWVELFDGKTLDGWTQRNGTATYRVEDKTIVGKTNTGSPNSFLCSDKDYGDFELEFEVKVHDKLNSGVQIRSQTKETP--------TGRVNGPQVEIEASGDGGAEAGYIYGEATGRGWLTPEDELKPHKQFKDGEWNKFRVVARGPRIQTWINGKPIADLTDEPIYKTHPKGFIG 191          
BLAST of mRNA_C-australica_Contig_10475.1.1 vs. uniprot
Match: A0A7C7X675_9PLAN (DUF1080 domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7X675_9PLAN)

HSP 1 Score: 209 bits (532), Expect = 1.740e-65
Identity = 102/175 (58.29%), Postives = 127/175 (72.57%), Query Frame = 1
Query:   28 WVALFDGTSLDGWTQKNGTATYEVSNGTIVGKTSERSPNSFLCTNKIYQDFDLEFEVKVDKGLNSGVQIRSKTREASIGDSNNEKAGRVIGPQVEI-VEGDSGSLSGYIWREATGDGWMISKGDPAAHTHFKGGEWNKYRILAEGPRIRTWINGNMVEDVTDKETQKDFPQGFIG 549
            WV LFDG SL+GW QKNGTATY+V   +IVG T+E+SPNSFLCT K Y +F+LEFEVKVD+ LNSGVQIRSKT+E  +G     + GRV GPQVEI   G  G+ +GY++ EATG GW+        H HFK GEWNK+R++A GPRI TWING ++ +++D    K  P+GFIG
Sbjct:   31 WVRLFDGKSLNGWIQKNGTATYKVDGDSIVGTTAEKSPNSFLCTVKEYGNFELEFEVKVDERLNSGVQIRSKTKEPKVG----AEFGRVFGPQVEIEASGAKGAEAGYVYGEATGRGWLTPPERLQPHKHFKDGEWNKFRVVARGPRIHTWINGQLIANLSDDPIYKTHPKGFIG 201          
BLAST of mRNA_C-australica_Contig_10475.1.1 vs. uniprot
Match: UPI001CCB3643 (DUF1080 domain-containing protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCB3643)

HSP 1 Score: 208 bits (530), Expect = 2.470e-65
Identity = 105/182 (57.69%), Postives = 132/182 (72.53%), Query Frame = 1
Query:    4 ATSEDSSDWVALFDGTSLDGWTQKNGTATYEVSNGTIVGKTSERSPNSFLCTNKIYQDFDLEFEVKVDKGLNSGVQIRSKTREASIGDSNNEKAGRVIGPQVEIVEGDSGSLSGYIWREATGDGWMISKGDPAAHTHFKGGEWNKYRILAEGPRIRTWINGNMVEDVTDKETQKDFPQGFIG 549
            AT++    WV LF+G  L GWTQKNGTATYEV +GTI+G T   SPNSFLCT++ Y +F+LEF+VKV   LNSGVQIRS+T+    GD+N+   GRV GPQVEI  G +   +GY++ EATG GW+  K     H+HFK GEWN YR++A GPRI+TWING M+ED+ D+E  K  P+GFIG
Sbjct:   17 ATAQAEEGWVELFNGKDLSGWTQKNGTATYEVKDGTILGTTKTGSPNSFLCTDEEYGNFELEFDVKVHDKLNSGVQIRSQTK----GDTND---GRVNGPQVEIEAGKA--EAGYVYGEATGRGWLTPKERLKPHSHFKSGEWNHYRVVANGPRIQTWINGEMIEDLNDEEIYKSHPKGFIG 189          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10475.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8D8B9_9PLAN1.480e-6958.01DUF1080 domain-containing protein n=1 Tax=Planctom... [more]
UPI001EE8F9C87.030e-6960.80DUF1080 domain-containing protein n=1 Tax=Rubinisp... [more]
A0A518B2M2_9BACT2.210e-6862.50DUF1080 domain-containing protein n=1 Tax=Planctom... [more]
A0A7V5UL44_9PLAN5.450e-6758.70DUF1080 domain-containing protein n=1 Tax=Planctom... [more]
A0A2G2JXJ1_9BACT2.350e-6657.71DUF1080 domain-containing protein n=1 Tax=Blastopi... [more]
A0A2E0B321_9BACT7.620e-6660.00DUF1080 domain-containing protein n=1 Tax=Blastopi... [more]
A0A518INV0_9BACT1.150e-6560.11DUF1080 domain-containing protein n=4 Tax=Rosistil... [more]
A0A517ZT02_9PLAN1.270e-6558.52DUF1080 domain-containing protein n=2 Tax=Symmachi... [more]
A0A7C7X675_9PLAN1.740e-6558.29DUF1080 domain-containing protein n=1 Tax=Planctom... [more]
UPI001CCB36432.470e-6557.69DUF1080 domain-containing protein n=1 Tax=Bremerel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10475contigC-australica_Contig_10475:267..815 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog314230.DSM3645_02096
PFAMsDUF1080
Model size549
Max annot lvl203682|Planctomycetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.03e-62
EggNOG OGsCOG3828@1|root,COG3828@2|Bacteria,2J1T0@203682|Planctomycetes
DescriptionDomain of Unknown Function (DUF1080)
Cds size549
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586783.6773002-CDS-C-australica_Contig_10475:266..8151682586783.6773002-CDS-C-australica_Contig_10475:266..815Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10475 267..815 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10475.1.1prot_C-australica_Contig_10475.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10475 267..815 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10475.1.1

>prot_C-australica_Contig_10475.1.1 ID=prot_C-australica_Contig_10475.1.1|Name=mRNA_C-australica_Contig_10475.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=183bp
SATSEDSSDWVALFDGTSLDGWTQKNGTATYEVSNGTIVGKTSERSPNSF
LCTNKIYQDFDLEFEVKVDKGLNSGVQIRSKTREASIGDSNNEKAGRVIG
PQVEIVEGDSGSLSGYIWREATGDGWMISKGDPAAHTHFKGGEWNKYRIL
AEGPRIRTWINGNMVEDVTDKETQKDFPQGFIG
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mRNA from alignment at C-australica_Contig_10475:267..815+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10475.1.1 ID=mRNA_C-australica_Contig_10475.1.1|Name=mRNA_C-australica_Contig_10475.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=549bp|location=Sequence derived from alignment at C-australica_Contig_10475:267..815+ (Chrysoparadoxa australica CS_1217)
TCAGCTACATCAGAAGATTCAAGTGATTGGGTCGCGCTATTTGATGGAAC ATCTCTTGATGGGTGGACCCAAAAAAACGGGACAGCTACCTATGAAGTTA GCAATGGAACAATCGTAGGCAAAACTTCAGAAAGAAGTCCAAACTCTTTC TTATGTACGAACAAAATCTACCAGGATTTTGACTTGGAATTTGAAGTGAA GGTTGATAAGGGTTTGAATTCCGGTGTACAAATTCGTTCGAAAACCAGGG AAGCATCGATTGGCGATAGTAACAATGAAAAAGCAGGAAGAGTAATCGGG CCTCAGGTGGAGATTGTAGAAGGAGATAGCGGCAGTTTATCCGGATATAT CTGGAGGGAAGCGACTGGTGATGGTTGGATGATCTCAAAAGGCGATCCAG CAGCTCATACCCATTTCAAAGGTGGTGAATGGAATAAATATAGAATACTT GCCGAAGGTCCTCGAATCAGGACATGGATCAATGGAAACATGGTCGAGGA CGTAACAGACAAAGAAACTCAAAAAGATTTCCCTCAGGGTTTTATTGGC
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Coding sequence (CDS) from alignment at C-australica_Contig_10475:267..815+

>mRNA_C-australica_Contig_10475.1.1 ID=mRNA_C-australica_Contig_10475.1.1|Name=mRNA_C-australica_Contig_10475.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=549bp|location=Sequence derived from alignment at C-australica_Contig_10475:267..815+ (Chrysoparadoxa australica CS_1217)
TCAGCTACATCAGAAGATTCAAGTGATTGGGTCGCGCTATTTGATGGAAC
ATCTCTTGATGGGTGGACCCAAAAAAACGGGACAGCTACCTATGAAGTTA
GCAATGGAACAATCGTAGGCAAAACTTCAGAAAGAAGTCCAAACTCTTTC
TTATGTACGAACAAAATCTACCAGGATTTTGACTTGGAATTTGAAGTGAA
GGTTGATAAGGGTTTGAATTCCGGTGTACAAATTCGTTCGAAAACCAGGG
AAGCATCGATTGGCGATAGTAACAATGAAAAAGCAGGAAGAGTAATCGGG
CCTCAGGTGGAGATTGTAGAAGGAGATAGCGGCAGTTTATCCGGATATAT
CTGGAGGGAAGCGACTGGTGATGGTTGGATGATCTCAAAAGGCGATCCAG
CAGCTCATACCCATTTCAAAGGTGGTGAATGGAATAAATATAGAATACTT
GCCGAAGGTCCTCGAATCAGGACATGGATCAATGGAAACATGGTCGAGGA
CGTAACAGACAAAGAAACTCAAAAAGATTTCCCTCAGGGTTTTATTGGC
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